ChIP-Atlas: Colocalization analysis

Colocalization analysis for HDAC1

Query protein: HDAC1

Cell class: Placenta

Sort key: SRX5162252 | Cytotrophoblast

Color legends

ChIP-seq data:

H-H

H-M

M-M

H-L

M-L

L-L

N.D.

Same

(Peak intensities are High, Middle or Low)

STRING data:

1000

750

500

250

N.D.

(Values = STRING's binding scores)

Downloads: TSV (text), GML (Cytoscape)

Links: Movie and Document for ChIP-Atlas Colocalization

Cell types	Exp. IDs	HDAC1's Colocalization partners		◢ HDAC1: Average	◣ SRX5162252: Cytotrophoblast	◢ SRX5162253: Cytotrophoblast	◢ SRX5162254: Cytotrophoblast	◢ HDAC1: STRING
Cytotrophoblast	SRX5162252	HDAC1	↻					≫
Cytotrophoblast	SRX5162248	CREBBP	↻					≫
Cytotrophoblast	SRX5162254	HDAC1	↻					≫
Cytotrophoblast	SRX5162246	CREBBP	↻					≫
Cytotrophoblast	SRX5162247	CREBBP	↻					≫
Cytotrophoblast	SRX5162256	RELB	↻					≫
Cytotrophoblast	SRX5162257	RELB	↻					≫
Trophoblast stem cells	SRX16314541	EP300	↻					≫
Trophoblast stem cells	SRX16314540	EP300	↻					≫
Trophoblast stem cells	SRX16314542	FOS	↻					≫
Cytotrophoblast	SRX5162255	RELB	↻					≫
Cytotrophoblast	SRX5162253	HDAC1	↻					≫
Trophoblast stem cells	SRX20732799	TFAP2C	↻					≫
Trophoblast stem cells	SRX20732798	TFAP2C	↻					≫
Trophoblast stem cells	SRX20732797	TFAP2C	↻					≫
HVMF	SRX199858	CTCF	↻					≫
HVMF	SRX199856	CTCF	↻					≫
BeWo	SRX1993444	ZSCAN5A	↻					≫
BeWo	SRX1993439	ZSCAN5B	↻					≫
BeWo	SRX1993438	ZSCAN5B	↻					≫
BeWo	SRX1993437	ZSCAN5A	↻					≫
BeWo	SRX16711529	ARNT	↻					≫
BeWo	SRX16711528	ARNT	↻					≫
BeWo	SRX16711527	ARNT	↻					≫
Placenta	SRX16500272	CTCF	↻					≫
Placenta	SRX16500271	CTCF	↻					≫
Placenta	SRX16498487	CTCF	↻					≫
Placenta	SRX16498486	CTCF	↻					≫
Trophoblast stem cells	SRX16314550	TFAP2C	↻					≫
Trophoblast stem cells	SRX16314549	TFAP2C	↻					≫
Trophoblast stem cells	SRX16314548	TEAD4	↻					≫
Trophoblast stem cells	SRX16314547	TEAD4	↻					≫
Trophoblast stem cells	SRX16314546	MAFK	↻					≫
Trophoblast stem cells	SRX16314545	MAFK	↻					≫
Trophoblast stem cells	SRX16314544	GATA2	↻					≫
Trophoblast stem cells	SRX16314543	GATA2	↻					≫
Trophoblast stem cells	SRX10003072	MSX2	↻					≫
Trophoblast stem cells	SRX10003071	MSX2	↻					≫
Trophoblast stem cells	SRX10003070	MSX2	↻					≫