ChIP-Atlas: Colocalization analysis

Colocalization analysis for CTCF

Query protein: CTCF

Cell class: Pupae

Sort key: SRX027388 | White prepupae

Color legends

ChIP-seq data:

H-H

H-M

M-M

H-L

M-L

L-L

N.D.

Same

(Peak intensities are High, Middle or Low)

STRING data:

1000

750

500

250

N.D.

(Values = STRING's binding scores)

Downloads: TSV (text), GML (Cytoscape)

Links: Movie and Document for ChIP-Atlas Colocalization

Cell types	Exp. IDs	CTCF's Colocalization partners		◢ CTCF: Average	◣ SRX027388: White prepupae	◢ CTCF: STRING
White prepupae	SRX027388	CTCF	↻			≫
White prepupae	SRX7050431	Cp190	↻			≫
White prepupae	SRX9005680	Nelf-A	↻			≫
Flight muscles	SRX5232776	Dp1	↻			≫
Flight muscles	SRX5232775	Dp1	↻			≫
White prepupae	SRX495228	Stat92E	↻			≫
White prepupae	SRX495216	psq	↻			≫
White prepupae	SRX495215	psq	↻			≫
White prepupae	SRX495188	CG8478	↻			≫
Flight muscles	SRX3049402	Rbf	↻			≫
Flight muscles	SRX3049401	Rbf	↻			≫
Prepupae	SRX26299345	CG8478	↻			≫
Prepupae	SRX26299343	CG7691	↻			≫
Prepupae	SRX26299342	CG7691	↻			≫
Prepupae	SRX26299339	CG11902	↻			≫
Prepupae	SRX26299338	CG11902	↻			≫
Prepupae	SRX26299337	CG11902	↻			≫
Prepupae	SRX26299336	CG11902	↻			≫
Prepupae	SRX26299309	CG7691	↻			≫
White prepupae	SRX041392	Trl	↻			≫
White prepupae	SRX030963	EcR	↻			≫
Pupae	SRX013059	CBP	↻			≫