ChIP-Atlas: Target genes

Potential target genes for RTF1

Query protein: RTF1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RTF1 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RTF1's Target genes

◣ RTF1: Average

◢ SRX13834116: DLD-1

◢ SRX13834129: DLD-1

◢ SRX15147195: DLD-1

◢ SRX15147196: DLD-1

◢ SRX15147197: DLD-1

◢ SRX15147198: DLD-1

◢ SRX11380120: LNCAP

◢ SRX11380121: LNCAP

◢ SRX11380122: LNCAP

◢ SRX11380123: LNCAP

◢ RTF1: STRING

DUX4
FRG2C
FRG2
CCDC200
PMF1-BGLAP
PMF1
MUC3A
TRIM48
CDH11
UGT1A3
SNX16
H3C15
H3C14
H2AC19
H2AC18
H4C11
LOC105378979
H3C13
H2BC18
WDR74
H2BU1
H2AW
H4C12
DLG2
H2BC5
H1-4
IFIT3
MTRNR2L1
COL23A1
H4C14
H1-2
H4C2
H3C2
H2AC4
H4C15
H2BC21
H2AC21
H2AC20
H3C10
H2BC14
H2BC13
H2AC14
H2AC13
FAM240C
UCKL1
H2BC11
H2AC11
GDF15
LRRC6
IER3
FLOT1
EEF1A1
H3C4
H2BC7
H2AC7
FBXW4
PANK1
LEMD2
C1orf159
SFN
H4C7
H3C7
H2BC9
TMSB10
H3C12
H2BC17
H2AC17
DDIT4
H2BC15
H2AC15
PAN3
H4C5
H2BC4
H2AC6
HTT
RPL22
H4C9
MRPL28
H4C1
H3C1
H1-1
WAPL
WDR43
ATXN2L
TNFRSF6B
TM9SF3
UBE2J2
H2AX
H4C3
H1-6
PTP4A1
PRDM5
YRDC
C1orf122
CALM2
RDH14
OGA
H1-3
WDR4
EXOSC10
LEMD3
NUTM2E
STK40
PIK3IP1
H2BC12
H2AC12
AP3D1
SLITRK3
ZNF362
PABPC1
ZCCHC3
TIAL1
RHOB
GALE
IREB2
ERRFI1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TARDBP
NUP62
IL4I1
ATF5
TMEM87B
PWWP2A
PDXDC1
RCC2
KHDRBS1
GADD45B
EIF4E
REEP4
RNF34
ACTB
RNPEP
UBC
LOC100289561
HSCB
DNAJC11
CHEK2
H2BC6
ETAA1
PALD1
LRRC47
ICMT
SFPQ
EPN1
MAEA
YTHDF1
WASF2
HEXIM1
BBC3
ABRAXAS2
ZNF367
AJUBA
RC3H2
PABPC4
ADCK2
TNKS2
PPA1
JUNB
FANK1
KDSR
RCN1
NFYB
PARD3B
ANP32E
EIF1
BRPF3
TNKS
HNRNPU
CLTA
PINK1
MICOS10-NBL1
MICOS10
POR
MAMDC2
HPS1
HSPA1L
HSPA1A
POMT2
GSTZ1
FEM1A
UHRF2
FAM120C
AMMECR1L
FH
RNF220
EIF3A
TSC22D1
DUSP16
PDCD6
SETD7
PEX6
CDK17
BTG1
POM121
CDK8
ATXN1
ATL2
SFT2D3
ATMIN
DYRK1A
ACTRT3
TLE4
RPAIN
NUP88
DNLZ
ZC3H6
ZC3H12C
MAP3K2
STX10
IER2
PSKH1
HSPA4
EPCAM
TUBA1C
INTS6
FABP5
ADO
SPG11
SOCS1
LRCH1
SF1
RABL6
RPL11
LOC100287896
LIPT2
RCC1
HNRNPM
BOD1
RRAS2
IVNS1ABP
RAB43
PLCB4
RBM17
MTX2
EIF3B
RIC8A
BET1L
TOP2B
RIOX1
METTL8
DCAF17
RBM15B
FOS
C19orf48
ZFYVE27
SCMH1
ROCK2
PPP1R10
MRPS18B
KIAA0232
ATP1B3
RNF213
EIF4G3
TRMT1
PPP1R26
NACC1
XPNPEP1
STRN4
STRN3
SLF2
LHX4
FKRP
DUS1L
AP4S1
TAX1BP1
TAF5
PSMD11
PPM1B
NF2
GRK5
FBXO9
CLSPN
CILK1
PAM16
EIF4H
MFSD14B
ATAD3A
SRBD1
HIPK3
FBXO34
MAP11
GHITM
EHBP1
NCOA2
NABP1
ID1
CRLS1
USP24
RRP7A
LMNB1
HPS6
SPTSSB
SPRED2
RDH11
NDUFA6
CLDN4
UBE2R2
RMI2
DLG5
ASF1A
EIF5A
ZBTB2
PROB1
MZB1
MTFR1L
JMJD1C
N4BP2
MCMBP
INPPL1
CCNJ
YLPM1
TCERG1
PDCD7
NT5C
NR2C2
LRPPRC
LRP8
UBTD1
SLC1A5
MTFMT
MMS19
CAPNS1
ZNF746
TINAGL1
SIRT4
REEP3
PET117
MAN1A2
KAT14
IPPK
HSF1
BOP1
RPN1
MYO5C
MTA3
FAM136A
COP1
AGFG1
UHRF1BP1
SMURF1
SEPHS2
RNF10
PSMD3
LONRF1
APLP2
PFN2
CDC42BPB
AHDC1
H6PD
BIRC6
AZIN1
WHAMM
UBE2G1
KCNAB2
FSD2
AMPD3
UBXN4
TRIM4
SCAF8
PPP3R1
NUDT19
E2F3
UBE2Z
PPRC1
OARD1
NFYA
EPS15
BRD7
SAP130
GPR137
EDEM1
BAD
ZNF398
RUVBL1
EEFSEC
YAP1
TMX4
SSU72
SPCS3
MTIF3
EID2
CTDSPL
C10orf95
PTOV1
MAML1
H4C4
H3C11
H1-5
GTF2I
FADD
DDI2
CLDN7
AGO2
SARAF
MFHAS1
FBXL17
ZFP41
HES4
GADD45G
FYN
FIBP
DUSP28
CCDC85B
ANKMY1
BCL2L13
LOC100421372
INO80D
HSPA14
GMPS
CDNF
PTPN23
GABPB1
TXNDC5
SETD6
SET
POGLUT3
NPEPPS
MRPL23
WASL
SPAG8
SP3
SLC25A38
NUP54
NFU1
HINT2
TGFA
PCGF6
NDST2
NBL1
ATE1
ST7
SHB
PAIP1
KAT7
ZNF487
ZFP91
ZCWPW1
MEPCE
MCPH1
LPXN
CRPPA
ATP6V0E2
AHCY
LSM14A
STRIP1
SELENOW
ODF2
LYSMD2
LACC1
KMT5A
H2BS1
EIF4A2
CSNK1G2
CCDC122
SULT1A4
SULT1A3
SLX1B
SLX1A
SLC35E2B
MAPKAPK5
BOLA2B
BOLA2-SMG1P6
BOLA2
ADNP2
WASHC1
UBE2V2
KIF1B
GMEB1
FAM86B2
UNC119B
SLC39A10
SKI
SCAF4
GSPT1
ZNF101
VAPA
UQCRFS1
PIGM
NBPF1
KIAA2013
DGKH
CSRNP2
C8orf37
ATP13A1
ZNF518A
SYNCRIP
PTBP3
MT2A
MRPS25
FEZ2
COPRS
TMEM260
TLE5
SCRN1
LTBP1
AVEN
ALDH18A1
ZNF3
TIMM13
SORT1
SNTB1
KLHL36
ATOX1
TASOR
SLC25A13
MAN1B1
FBXO11
SIRT3
SIN3A
PSMD13
PGK1
YIPF4
TUBB4B
TRERF1
TMEM116
SLC35E2A
NUDC
MACROH2A1
HECTD2
FAM166A
ERP29
DENND10
CUL5
CRIM1
YDJC
SRCAP
SPG7
LOC730183
CCDC116
C12orf66
SPPL3
RAB1B
PCNX2
HLA-E
CDK2AP1
AKIRIN1
ZBTB4
TRIB3
SLC35G6
SFRP4
PTMS
PPP6R3
POLR2J
POLR2A
EPDR1
CCDC71
ATG4D
ZNF800
ZNF598
UHMK1
UBE2L3
TMEM9B
SMIM10L1
SMAD1
PRH1-TAS2R14
PRH1
PHF3
GAPDH
TMBIM6
SPR
PPIA
PKD2
MFSD6
GRK2
FGFBP3
DIP2B
CYC1
CREM
CPT2
AK2
ACAP2
UTP18
TCF7L2
TAOK1
SIMC1
RNF13
RASA2
RAB11B
MRPS35
MBTD1
GTF2A1
FBXO42
UBE3A
MSANTD2
LIG3
EMSY
EIF2S2
ZCCHC7
XPO6
VAMP3
TALDO1
PRNP
NT5M
KRT8
IL17RB
HOMER1
DAZAP2
CLSTN1
CHDH
C6orf62
SOX4
RFX1
PKD1
PGAM1
OGFR
MND1
JOSD1
GTPBP1
DDAH1
DCAF10
D2HGDH
CCN1
TPD52L2
PTCH1
PFKL
IDNK
ID2
DENND2B
BLOC1S4
AKIP1
ABHD16B
TUBGCP5
TRAPPC8
RNF19B
PI4K2A
PARP8
OTUD3
ZNF337
USP19
UBE2N
SPATA5L1
SGF29
RDX
RB1CC1
POC1A
PHLDA2
MIEF1
LUC7L2
ILKAP
GCC1
GATM
FSCN3
FAM86B1
DENND4B
CHURC1-FNTB
CHURC1
C14orf119
ARF5
ACIN1
WDTC1
UBE3C
SIRT1
IER5L
DR1
CCSER1
CAST
ARID1A
ZBTB14
UBALD1
RNF207
MIER3
MFSD14C
HIVEP2
AFF1
TRAFD1
PIAS4
PGM1
NOL11
KLF10
HNRNPLL
FUCA2
CHPF2
ZBTB39
TUBA1B
TIGD6
TAMM41
RSF1
RGS10
PDZD8
KLF7
KDELR2
ILF3
HMGXB3
FOXJ2
FAM160B1
DNAJC10
BAG3
AAMDC
VPS13D
TBC1D12
STMN1
SBNO2
PPP1R9A
PPFIA1
NMD3
APOLD1
RGPD8
RGPD6
RGPD5
RER1
PSMC1
PRIMPOL
PLEKHN1
MORN1
IGF2R
HSBP1
CASP3
ZNF263
TSPAN10
SUV39H2
RNF169
NPLOC4
GATAD1
C16orf72
TTC13
TRAP1
SRPK1
RUNDC1
RND3
PTGES3L-AARSD1
PTGES3L
KDELR1
GRIN2D
GLO1
GADD45A
CLASP2
CIRBP
ARV1
TECPR2
SRF
SLMAP
RITA1
POLR3D
PI4K2B
NDUFV3
NARF
KLF6
DDX54
COLGALT1
CINP
SLC25A3
PCYT1A
NHLRC2
MRPS2
MAFG
DCLRE1A
C9orf116
BMPR1A
ACOT7
TMEM181
TMEM131
TCOF1
SLC6A9
SLC25A6
SDF4
NEK9
INKA2
HSPH1
H4-16
H2AJ
ETF1
DHPS
DDX20
DARS1
BRD3
B3GALT6
TMEM143
SYNGR4
SIN3B
RUFY3
RAB23
PGLS
PCIF1
ORAI1
MFAP3L
JUND
IL4R
H2AB3
H2AB2
H2AB1
FBXL5
F8A3
F8A2
F8A1
UBN1
NUDT2
NSMCE4A
MT1E
MKLN1
MCM9
LTO1
KIF24
GLYR1
ZMYND11
SUGP2
STMP1
PCOTH
NUDT18
MOV10
MIPEP
JAGN1
GRHL2
FBXO28
ATIC
ARMC6
ARFGEF1
ZNF652
ZNF638
YTHDF2
XPO7
TBK1
SPEN
SCAND1
RNF114
RAD23B
PLXNB2
PKN1
NFATC2IP
LRP2BP
IRF5
HIP1R
ELAC1
CNIH4
BPNT2
APTX
ANKRD37
AEBP2
ACBD3
SQSTM1
SMAD5
SFXN1
PRRC2C
PLK2
MYO10
MGRN1
DNAJA2
ATR
ZNF695
USP22
THOC7
TEX264
MARVELD2
LRRC37A3
IDE
ATXN7
ARHGEF17
ABRACL
XRN2
WNK1
TSPAN14
TOM1
TEKT2
TASOR2
TAS1R1
SRSF6
SIPA1L1
SEPTIN8
SAMD4A
PTPN9
PPP6R2
OTUD4
NOL9
IRF2BP2
GALK2
CUL1
COPS2
CEP68
ADPRS
UNC45B
TOP3B
TMEM51
RP9
POMZP3
POLR2J3
PGAP2
PFDN4
ME1
MARVELD1
LSM14B
KIF5A
HNRNPA0
GLCCI1
DCTN2
UBE2B
SYMPK
SLC7A1
PRR30
PREB
NUP205
METTL9
GORASP2
FOXA3
FBRS
CDKL3
ZNF195
UROS
UBE2D1
RAB28
PPP4R3A
KHSRP
IFIT5
HINT1
BCCIP
ANKRD13C
VWA8
UBE2Q2
RPS9
RBBP6
PPP1R8
PCM1
NRBF2
KCTD15
FAM53C
EXPH5
CSKMT
CDC25C
C11orf98
ACTN1
ZNF503
WBP4
VCL
UACA
PUSL1
PTDSS2
PRMT6
NFAT5
NAA25
N4BP2L2
MIB2
KDF1
FUT4
ELF1
BSDC1
ATXN10
AP1G1
ACAP3
ZFR
ZC3H7B
XPO1
SNX19
SMAD4
SEC24B
RNF19A
RANGAP1
PRRT2
PRR12
PAIP2
PAGR1
MVP
MRPL19
MARVELD3
KRT19
HMGCL
GATA6
GAN
FOXK2
BIK
TSPYL1
TRIM27
TIMM23B
ST20-MTHFS
SLK
PNRC1
PFKP
PARG
NOTCH2
KMT2A
IPMK
HDLBP
GLCE
FAM169A
DSE
CISD1
ZMYND12
VPS29
UHRF1BP1L
TMPO
SULT6B1
SLC25A24
RNF126
RAD9B
PPCS
NFKBIZ
NCOR2
MORF4L1
MAP2K4
KAT6A
JADE1
HASPIN
GGPS1
FEM1B
FDX1
CSNK2A2
COX5B
CCDC30
ARID4B
ANKRD36B
ACTR1B