ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
CELSR3
HTR5A
GLRA1
RAB37
MTRNR2L2
EPHA10
L1CAM
MTRNR2L8
WDR74
CPLX2
SST
BARHL1
CHGB
SCRT1
SNAP25
SLC12A5
GDAP1L1
NPPB
HS3ST2
ANK1
MAPK8IP2
RANBP3
TMEM181
SCGN
CHRNB2
PTPRN
LHFPL5
SLC39A3
SEZ6
HES3
DNAJC6
KCNK12
PGBD5
CCDC92B
HPCA
NTSR2
UNC80
AP3B2
MTRNR2L9
CHRM4
OGDHL
NRSN1
RBM28
CHGA
ZFYVE27
PTPRS
VWC2L
GRM1
RNF130
GPR78
KLF11
SPOP
MMP24
SCRT2
RPF1
SCAMP5
SRRM3
PDE1C
PIK3R3
VGF
HMGA1
GCFC2
CDIP1
SEZ6L2
ASPHD1
TMEM179
SLC7A6OS
PRMT7
HTR1A
PLEKHM3
STMN3
KCNH6
PMS2
AIMP2
CDC16
CCZ1B
LEMD3
PDE4C
ZNFX1
NEURL2
CTSA
LOC112694756
CYB5R4
RBM39
G6PC3
GTF3C3
S100A8
SCG3
GPR6
SLC25A21
MARCHF4
SVOP
KATNA1
SNTG1
PET117
KAT14
KDM3A
NME1
HDAC2
SNRPB2
AATF
CENPA
CRH
PTDSS1
MTERF3
INTS5
HEATR5A
SAYSD1
RFC1
PCNA
MNAT1
SRSF2
MFSD11
EPM2A
GPR158
PRDX1
NMS
NPDC1
UTP11
SNRPB
E2F6
CPNE4
SLC9A1
GRIA2
N6AMT1
HRH3
H4C12
EVI5
LRIF1
DTD2
AKAIN1
TOMM22
H4C3
PAQR4
MAT2A
DDX1
CCDC200
GOLGA8A
ABCA3
SGTA
HDAC4
FAAH
DNAJC11
STK25
UNC13A
XKR4
SLC6A5
STAT3
PCSK1
VPS29
RAD9B
TPH2
MRPL39
CCNC
SRSF6
DNER
PSMD3
PMVK
ARFGAP3
DHDDS
POLR2J3
RNASEH1
ZBTB4
POLR2A
GLS2
PRMT5
PDHB
INSR
SCFD1
TCFL5
SLC45A4
TOMM5
GTF3A
ANKRD34C
IKZF3
NUP54
KCNB1
INTS12
GSTCD
WTAP
SOD2
TTI2
CDCA7
H4C11
PEX3
ADAT2
HBQ1
NDUFAF5
ESF1
HES6
NXF1
CKLF-CMTM1
CKLF
DHRS2
ZC3H7A
SNX17
EIF2B4
SLC37A4
AKAP11
RPL31
TRIM67
RAD50
CPQ
FEM1B
ID2
ARL6IP1
WDR45B
WDR36
C12orf57
DNLZ
DRG2
BSN
SEC14L1
PRKDC
MCM4
H1-2
RUNDC3A
RABGGTA
POLR3D
MED23
TAB1
RRP1B
HSF2BP
IRF9
ACTL6B
LMCD1
RUSF1
CTNNB1
CCDC88A
SRP19
AARS2
CDK5RAP1
ANKRD36
OPRM1
ACTR3
ZNF473
VRK3
SEH1L
MAPK11
MC1R
CSTF1
AURKA
PRLHR
STX16
TSEN54
CASKIN2
ALKBH2
CLUAP1
ZCCHC7
LCLAT1
SPAG4
GINS3
EBPL
ZSCAN12
ZNF165
GGACT
NSFL1C
SF3B6
FAM228B
TMEM186
PMM2
TBC1D13
MEST
TSFM
DGAT2
FMNL3
PSMD5
GINS1
RPL27
RPS7
TIGD1
NR1D1
EIF4E2
SNRPD1
EIF3B
TTC26
KANSL3
FAM227B
DTWD1
COG7
PBX3
RAB10
CCDC107
CPNE9
BMS1
GARS1
MRPS15
HMGN3
FAM237A
GJA10
RPS6
PHF20
CLVS1
CTXN2
C4B_2
C4B
SMARCD2
VPS25
MLXIP
LRRC37A3
CNPY3
TEFM
SLBP
ACSL6
NCBP3
CLN3
YTHDF1
CERS6
PTP4A2
RIOK2
NSUN5
HLTF
EIF4A2
NRL
ZNF23
IMPDH2
RBBP5
REX1BD
DHX40
TEX14
RAD51C
BAIAP2
PCSK9
SIRT4
IPO4
ABCC6
HSPA1B
NOP14
GRK4
TINF2
EFTUD2
CCDC103
POLE4
HHIPL1
CCDC85C
SMPD3
RMND5A
MTERF4
UGP2
RTEL1
USH1G
OTOP2
LRP2BP
ANKRD37
H3C3
GGA2
WDR35
NDUFAB1
FAM177A1
DPP10
H4C4
TBL3
TRIM44
TMEM268
SLC35A3
EZH1
UBE2Q1
STX18
LRRC59
PRPF6
RBM45
NUF2
MDH1B
FASTKD2
SDHD
RPL10A
SPHK1
EPB41L4B
NUS1
MTF2
TNFAIP1
IFT20
LRP6
RHOB
VARS2
FUS
KCNH4
RPS2
PEX5L
GRIN1
CDH23
KIF18B
NDUFS7
MED31
C17orf100
DHRS4
ATF7IP2
FAM163B
DLX2
ZNF292
FRG1
BICDL1
FAM98B
POLR2J
C8orf37
SHF
NOC3L
TAF5
POLR3E
HSP90AB1
RBL1
OSTM1
PSMF1
AURKAIP1
RSPH3
SLC25A10
MRPL44
LDAH
EAPP
SNAI1
DDRGK1
RGPD2
RGPD1
C9orf24
SAR1B
LATS1
PDCD2L
ODC1
PNPT1
MTIF2
MRPL21
IGHMBP2
H2BC17
H2AC17
SYNJ1
CALM1
LANCL1
GLS
CPS1
TIA1
ARL14EP
ISM1
DUS2
DDX28
PRR3
GNL1
TP53RK
CMTR2
DCP1A
ZCCHC3
CEP295
COPS7A
LTV1
ZNF624
UQCC3
NEU1
LBHD1
H4C14
AXIN2
DAXX
MAP1LC3B
FBXO31
MRPL3
MRPS10
ESYT3
NANP
DRAM1
RPL13
CNTRL
C5
MARCHF11
DCLRE1B
AP4B1
HAL
BCL7C
EBAG9
TRAPPC6B
H2AX
TOB2
METAP2
PTCD3
POLR1A
SPG11
C10orf88
TBCD
CCDC83
CCDC117
LONP1
CATSPERD
COMMD1
MRPL45
OSBPL6
TAF6
CNPY4
R3HCC1
SLC7A6
TM9SF4
OSGEPL1
RPLP0
RBM34
NUP62
IL4I1
ATF5
FABP1
UQCC2
KIZ
POLR1H
HUS1
ANKRD40
VPS16
POLR2C
PCED1A
ATR
GADD45B
MST1
SRARP
SNRNP200
TRIM33
C6orf136
USP14
MAN2C1
PGRMC2
MRPL58
BOLA3
DIMT1
SMIM12
NDUFB3
FAM126B
TASOR2
ANO10
ABHD5
SMC3
UGT2B10
TRMT2A
RANBP1
DUS3L
E2F3
ACAD9
ARFGEF2
AKR1A1
TM2D1
HBS1L
TOR1AIP1
H4C5
SCAND1
WASHC2C
G2E3
ZNF598
CACNG3
SNAP47
JMJD4
TCTEX1D2
SHH
TM9SF1
FDXR
RRN3
TMA16
NEK3
ATP5F1E
NOB1
WDR6
MCM6
PIGL
POLDIP3
NBPF1
EIF2D
H3C2
SRRT
GLO1
CFL2
TACO1
TOMM34
DUS1L
PTGES3
CARMIL3
STEAP1
APOA1
TASOR
RAD9A
NEPRO
HSPA5
DNMT3A
SCN3B
ZFR
DRD2
BSX
CITED2
GATAD2A
SNF8
FAM83D
TSG101
SYNM
HERPUD1
GRB7
SLC25A36
ITPR1
RPS27L
SETD6
TBX10
CCT4
VMP1
PTRH2
MEX3D
NOP56
PSME3
XKR9
LACTB2
SELENOW
TSGA10
EXOSC6
MRNIP
TMEM222
ZNF264
CBWD5
MOB4
RPL29
BRMS1L
CBWD3
NHLRC1
GFM2
TOM1
UTP14C
RNF227
ZGPAT
ARFRP1
NELFA
APOB
PLS1
SKP1
SPTSSA
ZSCAN30
EFCAB13
PGAP2
DNPH1
DHRS4L2
AGGF1
UBL7
ZNF148
ARSG
VRK2
CPSF1
NEK2
PSMD7
THOC5
PBRM1
GNL3
NID1
NOL10
MRPL16
AK2
LOC110384692
C4A
XYLB
MRPL30
MITD1
GTF3C6
SUGCT
MPLKIP
MRM3
GLOD4
FAM53C
CDC25C
NUDT3
RABL2B
NOL7
HECTD1
MAVS
CTR9
CISD1
ALG1
CPPED1
PSMB6
MRPS34
EME2
TMEM101
STT3B
PGGT1B
PAQR7
C19orf53
LUC7L
SULT1A4
SULT1A3
COPS9
CC2D2B
SERPINA11
LIG3
TMEM230
ANKRD36C
ABCB6
ZBTB40
SRP54
DPY19L4
NPM1
SGF29
NFE2L2
RXFP3
PVALEF
DNAH7
AATK
EIF3F
PAXBP1
DMAP1
PSMC3IP
USP42
MCAT
CWC25
TFB1M
ABCF1
MTCH2
EIF4G2
SSNA1
ANAPC2
TNFRSF10D
ZNHIT3
H4C2
DIABLO
AKAP10
NR1H2
GUSB
KNOP1
RPS3
SCAPER
TMEM106B
DCLRE1C
PSMD8
TMX3
CCDC102B
ANAPC11
ALYREF
ZNF571
ZNF540
ID1
ZKSCAN2
STK4
LOC100287896
LIPT2
H3-3B
GTF2H2C_2
GTF2H2C
H4C8
BCL7B
SLC44A1
ZNF3
TTI1
RPRD1B
CCDC88C
C16orf72
FBLL1
SLC17A6
CCDC126
NCAPH
PDRG1
DDX19B
VAMP5
CARTPT
AARS1
UTP3
FAM133B
U2SURP
UBOX5
FASTKD5
NR1H3
ACP2
NBAS
MSH5
PDCD7
HSF4
XRN2
CACYBP
BNIP1
BFAR
YIPF3
POLR1C
CSNK2A1
ADAM22
PNN
CRLS1
AIP
NCL
ZBTB8OS
RBBP4
SRSF5
PRORP
PPP2R3C
RAD54L2
NAE1
TRMT61B
B2M
LAMTOR5
DDX18
EBNA1BP2
CFAP57
PHYHIPL
DNAH14
OSBPL8
DGCR8
AFF1
RNF40
PSMC4
CCDC189
URGCP
UBE2D4
ERLIN2
AAR2
FANCL
RNMT
FAM210A
CLCN7
RPS20
EIF2AK3
TOR1A
GNPNAT1
RANBP2
TARS2
GID8
DIDO1
CD320
THUMPD2
NHEJ1
ADAM17
ARL4D
LCMT2
ADAL
NUTM1
NOP10
SULT1A1
CTSO
CHCHD2
COX16
PARL
COQ8A
GEMIN7
LDHA
LHX3
TMSB10
NOP58
YARS1
S100PBP
SRSF3
ZNF878
ENO1
TRIM25
EEF1AKMT1
HIBCH
UBE2I
HSPA1L
HSPA1A
ALDOA
H4C15
SELENOP
POLG
MRPS31
SUPT7L
SLC4A1AP
RPL5
IDH3B
ALDH7A1
MYH7B
GSS
DAGLB
AGFG1
HSPE1-MOB4
HSPE1
HSPD1
TOB1
ALKBH3
MCCC1
TUBGCP3
SMAD5
ACYP2
TRDMT1
WDR70
GTF2H4
THADA
GDNF
NDUFA10
SLC13A3
ATOH7
CENPF
TMED1
RPL38
TBC1D19
CBFA2T2
KRI1
KCNC1
TOX4
RAB2B
POLR3G
MBLAC2
PDS5A
PGAM5
PYGB
MTHFD2
TAOK1
NDUFAF3
FAM184A
DALRD3
DBI
C2orf76
GTF2H2
NOL11
DCAKD
MARCHF7
CHD9
SSBP1
FAM120B
PLD6
TUT1
NMT1
PPP1CB
IARS1
ZNF30
FOSL2
VEZT
FGD6
MTG1
RPL32
WASHC2A
TPST1
TMEM97
SH3BP2
CNTNAP5
TATDN3
NSL1
P4HA1
HNRNPC
FAN1
USP37
CNOT9
PDIA5
TTC5
IPP
RBM12
CPNE1
CABLES2
YIPF2
TIMM29
FTL
NFKBIZ
PYURF
PIGY
HERC3
TJAP1
DCAF10
SOS1
ALG10
C5orf51
CCDC43
AK3
ZC3H6
SRP68
PSMB5
YIPF6
TUBB4B
HNRNPH1
ACSL3
MRPL19
GPN1
CCDC121
NAGK
GTF2B
ANKRD54
POR
RPS15
CLN6
EIF3L
PCK2
ATXN7L2
SDHAF4
MEIS1
SLC35B3
TTLL9
LRP12
SF3A3
CCNL1
TMEM242
ACIN1
HEXIM2
H2AC19
H2AC18
C2orf73
TOLLIP
CFAP20
C14orf119
WDR33
NCOA3
GTPBP4
MBNL1
VTA1
NMBR
C2CD5
MYBL2
UGDH
UBE2V2
RPS27A
CLHC1
VPS13A
STXBP5L
SLC25A13
SEC23A
IMMT
VPS33A
RPS21
FAM200B
MFSD4B
SPRYD4
MRRF