ChIP-Atlas: Target genes

Potential target genes for ZC3H4

Query protein: ZC3H4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13007953 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
ZC3H4's Target genes

◢ ZC3H4: Average

◢ SRX12813321: 293

◢ SRX12813329: 293

◢ SRX9671329: HCT 116

◢ SRX9671330: HCT 116

◢ SRX10478314: Hep G2

◢ SRX10478315: Hep G2

◢ SRX3230408: Hep G2

◢ SRX13007952: K-562

◣ SRX13007953: K-562

◢ ZC3H4: STRING

H2BC11
H2AC11
MTRNR2L2
WDR74
CCDC200
KLF6
H2BC5
H1-4
MTRNR2L8
EGR1
ZSCAN31
NPAS4
H2BC21
H2AC20
H2AC21
IER5
DDX5
CEP95
EIF1
NUDC
H4C14
H4C15
H3C2
NFYC
LUC7L2
H1-2
TOB1
HNRNPA3
POLDIP3
USP48
UAP1
KMT2E
H4C11
H2AC12
H2BC12
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
H4C2
RB1CC1
MRPL40
HIRA
CREB3L2
H4C3
UBE2D3
C11orf65
H4C5
H2BC8
H2AC8
DDIT3
ATF3
H2BC17
H2AC17
MYLIP
SSU72
HTR5A
H4C8
HSPA5
ZC3H6
CDK19
AMD1
H2BC4
H2AC6
BCL2L13
NUP214
BTG1
TUBA1C
FER
H2BC15
H2AC15
UBC
H4C12
CACYBP
H3C4
FMC1-LUC7L2
FMC1
OCIAD1
ZNF274
STMP1
HSPA1L
HSPA1A
GOLGB1
PDE7A
LRIF1
UBN2
CBLL1
SARAF
H3C15
H3C14
H2AC19
H2AC18
H2BC13
H2AC13
GOLPH3
TOR1AIP1
H4C4
STK40
HSPA1B
CCNL1
H2BU1
H2AW
SRSF2
MFSD11
UBXN4
RTN4
CEP85
GADD45A
TP53I3
YTHDC1
MMADHC
ZNF687
PELI1
ERBIN
CCDC91
UBQLN1
NEK1
HIPK1
H2BC18
ATF2
SFR1
UCHL5
RO60
IQSEC3
WDR27
C6orf120
PRMT2
SP3
ZNF3
JPT1
SLC3A2
GPSM3
CALM2
JUND
JUN
SLC7A11
NUDT18
KIAA1958
C9orf147
RIPK2
RAB11FIP1
MAD2L1BP
GTPBP2
H2BC7
H2AC7
CEP295
BACH1
FBXO31
MAP1LC3B
SND1
TBC1D5
USO1
ATF4
SERF2
ADGRF3
TMEM9
SELENOI
COX20
JMJD1C
LRRC37A3
ATG10
SRSF7
RERE
TMEM209
HNRNPA1
CBX5
PPM1A
ATL3
PPIL2
ZFC3H1
THAP2
BCLAF1
TCAIM
ZNF487
TTC3
PIGP
DDX3X
CAP1
P4HA1
TES
RTL10
GNB1L
DNAH14
HDAC4
PCMTD1
ATP2C1
POU2F1
MARCHF7
NFAT5
CRKL
H2AC4
SIRT4
EFCAB2
DHX9
CETN3
RNF146
FBXL17
BORCS5
FGGY
MTR
PDCD6IP
NSFL1C
SP2
ESCO1
SPATA9
RHOBTB3
ARF4
DLAT
H4C9
TBRG4
KLHL12
TAGLN2
COX18
H1-3
ZFAND3
RNF11
NFE2L2
DCAF8
N6AMT1
ANLN
KIAA0895
CBWD5
CBWD3
ZNF440
MLLT10
AREG
ZNF33B
CMC1
TMSB4X
CEP135
DUSP1
USPL1
HMGB1
SCAF8
ZNF165
MNT
TOP3B
TGOLN2
ZCCHC7
PIGF
CRIPT
MLH1
EPM2AIP1
ZYX
ZFAND2A
RBMXL1
KYAT3
NDEL1
ACBD6
ADGRE5
SON
GART
YWHAG
IPP
NADK2
OSBPL8
ELAPOR2
WDR26
ADSS2
RICTOR
TRIM24
UBR2
EIF4G2
HSP90AB1
MAP4K3
STIP1
LEKR1
FAF2
DMTF1
UTP11
MOB4
RPL15
NKIRAS1
MAPRE2
PRDX1
HIPK3
OXNAD1
DPH3
ZBED5
TMEM50B
MATR3
CTNNAL1
NSD3
PMS2
AIMP2
SOD2
CEP83
TUBA1B
UFL1
SPAG9
PRRC1
USP14
SULT6B1
PPIL4
GAGE2A
ENSA
ZNF74
SPOP
NBPF1
YES1
HP1BP3
ERN1
SHPRH
AFF1
TTI2
ZNF250
KBTBD3
AASDHPPT
PNRC1
C12orf57
YBX1
WDR33
ING3
TSPYL1
DSE
NR4A2
ERAP1
MED23
OSBPL6
DDX59
ARRDC3
SESN1
FBXL18
FTH1
CCT2
TRIM27
ADK
ADAM17
ESYT2
LRRC61
ACTR3C
SETD9
DDX21
ING1
NBR1
TRPM7
METTL8
DCAF17
ID1
NOP58
CCDC146
USP53
LUC7L
GLCCI1
DNAJC9
CEP350
IRAK2
FUS
NCOA7
MORF4L2
IFRD1
PHF19
B3GALNT2
KIAA1522
ZNF800
SEC31A
KANSL1
TMEM217
TBC1D22B
AHI1
TRMT1L
SWT1
FBXO4
TIMM17A
ANXA7
P2RX4
IPMK
MPC2
DCAF6
LMNB1
RBM7
C11orf71
CRPPA
ASCC1
ANAPC16
OSR2
CDK13
KLHL8
PHTF1
ABHD11
HECTD1
SLC25A32
DCAF13
UQCRQ
GDF9
FAM234A
H3C13
NUF2
NET1
PPIG
TPD52L1
MAPK1
ARL15
SYAP1
CIC
POLR2J3
CHD1
IMMP2L
USP3
HMMR
NUDCD2
CAPRIN1
CSE1L
NUP205
FOXO3
NXF1
KLHDC2
MRPL44
NUCKS1
PPP1R12A
POGLUT3
SKP1
CSPP1
SNX16
PLD1
NBN
EFHC1
IGF2R
MGA
NAMPT
FBXO34
ZNF131
HNRNPA2B1
ZNF451
CBX3
IVNS1ABP
CNOT2
PDE4DIP
ZNF596
GPBP1L1
CAPN7
RAN
ARCN1
ZNF497
PRMT3
ZNF780A
PRDX6
CD55
RCC1L
PRPF38B
IFNAR1
ATP5PD
TCAF1
TRMO
RBM12B
REEP3
NUP153
ACTG1
SNX14
ATP2B1
GMNN
PNRC2
NUDT4B
NUDT4
GALM
ZNF76
CSDE1
ZKSCAN3
EIF1B
ABHD16A
SAV1
RBM3
MED17
TRAPPC2
OFD1
ZNF718
ZNF595
UBE2N
PSMA1
SMARCA5
TTC37
ARSK
PDE3B
LRIG2
CR1L
DARS1
MXI1
ZDHHC17
POLR3G
MBLAC2
NDUFA5
YWHAZ
SOD1
TTC32
PCBP2
ALDH16A1
ZBTB8OS
RBBP4
DR1
YEATS4
XPC
LSM3
HSPA4
MRPL48
GPN2
CA8
MTHFD2
SF3A3
PSMG1
UBIAD1
EIF2D
FDXACB1
C11orf1
ICE2
FOSB
EIF4E
METAP1D
NDC80
METTL4
WTAP
ELF2
TFRC
ZNF627
USP9X
AHCTF1
CALCOCO2
C1orf53
DTNBP1
TBC1D31
MCL1
C8orf37
PRKRA
PJVK
VAPA
SMARCA2
SLC5A3
PGGHG
MRPS6
CLTCL1
DYNC1I2
CREBZF
PTPN23
YPEL1
TAL1
UBE2H
ZNF143
DSTYK
MKS1
KIAA0232
CDKN1C
CAST
RPL5
ZNF398
ZNF425
TARS3
PRKAG1
USP15
SERP1
PAIP2
EIF2A
ENOSF1
THUMPD1
RASSF1
HSPA4L
C15orf61
TCEANC
AHCYL1
ADAM10
PPP1R10
SRSF6
AIG1
SFPQ
KATNA1
TRAF6
RAG1
BLOC1S6
LRBA
ZC3H4
CPPED1
ARIH1
RRM2B
ERF
MMS22L
HNRNPH1
TRA2B
SLC16A1
ZNF529
PPP1R15A
KLF9
XKR7
MAPK14
ZBTB18
PRAME
FOS
CTSL
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CEP70
BCR
DCTN6
MCRIP1
EPM2A
LTV1
SRSF11
CCNH
LARS2
SBDS
MARCHF3
KLHL18
KIF9
ZFAND5
TMEM242
PHC2
ZKSCAN8
EDEM3
STX6
RAB3GAP2
HSPH1
EVI5
COX5B
PDSS2
TMEM19
TCP1
MRPL18
SH3BP5L
LSM2
DMXL1
RC3H1
ZYG11A
MAK
FBXO42
ERCC1
FAM185A
METTL25
CCDC59
DLX1
TTC26
CEP85L
TMEM168
PJA2
TM2D3
UBAP1
FAM13A
ADIPOR1
CD2AP
MXD1
SDCBP2
RFX3
TMEM106B
GTF2IRD2
GTF2IRD2B
SMC4
IFT80
SLC25A16
INTS7
ESRRA
DTL
UBXN8
H3C10
HECTD2
TMEM191B
SCYL3
H2AX
PCF11
UNK
PHIP
ATP2A2
SPATC1L
TMED10
SPG11
USP36
CCDC66
THAP9
C22orf39
YOD1
TPP1
RPRD1A
PFKFB2
DENND4A
BTF3L4
E2F6
ZSCAN26
TMEM248
INO80C
DNAJA1
APTX
COA6
F11R
PBLD
HNRNPH3
ZNF343
SEPTIN7
PTPN4
XRN1
PTPN2
ACTR3B
CALU
TRA2A
THRB
AFF4
CDC73
UBB
TMEM267
SUMF1
RABGAP1L
ENTPD5
BBOF1
MOSPD3
GABARAP
MMAA
SDCBP
PPP1CB
CFAP410
LYSMD3
CRELD1
TMEM38B
PTBP3
CTNNB1
RPRD2
RANBP9
ZNF33A
CLTC
ZNF621
AMMECR1L
SLC19A2
RAB5A
EFHB
IFNGR1
HGSNAT
GFUS
BBS5
EEF1A1
ARID2
RPL9
LIAS
GMCL1
SS18
H3-3B
TMEM87B
RAPGEF6
SETD5
GLS
STAM2
FBXO28
PGBD2
THRAP3
DNAJB1
HBP1
KPNA2
BAG6
APOM
DYNC2I1
VPS26A
RGS2
TFB1M
HNRNPF
GDI2
TGIF1
MRPL21
IGHMBP2
LRRC8B
TCFL5
ASCC3
KIN
ATP5F1C
CDC5L
LZTR1
CDK1
THAP7
STX4
VPS13C
ITSN1
CRYZL1
PCIF1
SMG7
CCDC90B
WDR4
UXT
ANO10
ABHD5
MAN1A1
OSBPL9
SEC22C
NKTR
VCL
TNFAIP8
PRPF38A
ORC1
NEK2
NBEAL2
GINS4
SLC25A28
TAMM41
PLA2G6
HEXIM1
PMVK
VDAC2
SNRPG
AFG3L2
MRPL17
NKRF
SLC25A5
ATL2
KMT5C
BTN2A2
ATAD3A
RAD50
MDM4
CDK5RAP3
GHITM
RGL2
MRPS18C
HELQ
ECI2
NR1D2
MTFR1
GMPS
C12orf65
DHX40
ZNF391
ABCD3
HSP90B1
CCNB2
KIFAP3
NFE2L1
ZNF511
TUBGCP2
SLC35A4
PDCD4
DGCR2
APBB3
TAPT1
PPM1D
STXBP3
TRPC1
SLC25A3
L3HYPDH
JKAMP
CDKN2C
EBAG9
HADH
SERPINI1
PDCD10
PSMB10
XRCC6
DESI1
FUT4
NR3C1
TTC30B
ZNF706
ZC3HAV1
ZBTB43
RAB30
MAT2A
SRSF3
SAR1B
ZNF672
P2RX6
ATAD2B
SFT2D3
ASXL2
RINT1
GPN1
CCDC121
SINHCAF
FBXO22
BRK1
CD46
FAM72B
COMMD3-BMI1
COMMD3
RUNX1
HPCA
NPM1
TTC30A
GATAD1
SNAP29
PI4KA
NDUFB5
MRPL47
MANBA
DIXDC1
H2BC14
H2AC14
HNRNPR
VRK2
TAF12
TSG101
PPP1R15B
ZER1
TFG
TACC1
PDIA3
LRGUK
ATP5IF1
ARHGAP6
L1CAM
MST1
SRSF5
CASC3
ZNF184
TAX1BP1
UFD1
CDC45
TOP2B
CENPN
NDUFV3
INTS12
GSTCD
ZNF644
ASPH
SERPINB9
CLCC1
ASNS
THAP5
DNAJB9
TPGS2
MAK16
FEM1C
TRAPPC12
TMEM41A
EFCAB13
PXMP4
PFDN1
CYTH3
BSDC1
PHF10
THNSL1
ST7L
CAPZA1
TENT4A
C1GALT1
NBAS
DUS4L-BCAP29
DUS4L
COG5
MTMR12
TMEM64
ST3GAL3
NDUFA6
MFSD8
BAG3
ARID1A
ACTR2
ABHD18
REV3L
ZNF518A
PCM1
GOPC
NDUFB2
SNRPE
RNF32
CEP68
RAB20
PTGES3
MSL2
INTS2
MTIF2
RBM28
MKLN1
MAPK1IP1L
CLN5
CLASP2
ABRAXAS1
EXD1
CLN8
CHP1
H1-10
TMEM116
ERP29
FBXW2
CENPC
ZNF546
FAM184A
SLC10A4
SDE2
MARCHF6
FAM72C
FAM72A
CCDC71L
SUPT3H
KLHL32
ERMARD
RHBDD1
SSR3
KTI12
PRRC2C
SMARCC1
PSMD5
LRP2BP
ERGIC3
CHIC2
ANKRD37
SIRT5
SECISBP2
GPRC5C
SMCHD1
CHCHD3
ISOC1
CLK1
NDUFS7
TTF2
CD164
AGBL3
TVP23B
VAMP4
SLC11A2
MOV10
RBM45
GOLGA1