ChIP-Atlas: Target genes

Potential target genes for CBX3

Query protein: CBX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13327958 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CBX3's Target genes

◢ CBX3: Average

◢ SRX3010075: GM12878

◢ SRX3010076: GM12878

◢ SRX055346: HCT 116

◢ SRX055348: HCT 116

◢ SRX055353: HCT 116

◢ SRX055354: HCT 116

◢ SRX130495: HCT 116

◢ SRX130496: HCT 116

◢ SRX190214: HCT 116

◢ SRX8512748: HCT 116

◢ SRX3010018: hESC H1

◢ SRX3010019: hESC H1

◢ SRX116427: K-562

◢ SRX186764: K-562

◢ SRX190188: K-562

◢ SRX13327955: LNCAP

◢ SRX13327956: LNCAP

◢ SRX13327964: LNCAP

◢ SRX13327965: LNCAP

◢ SRX18378472: LP-1

◢ SRX13327957: MCF-7

◣ SRX13327958: MCF-7

◢ SRX13327959: MCF-7

◢ SRX13327960: MCF-7

◢ SRX13327961: MCF-7

◢ SRX13327962: MCF-7

◢ SRX13327963: MCF-7

◢ SRX13327966: MCF-7

◢ SRX13327967: MCF-7

◢ SRX13327974: MCF-7

◢ SRX13327975: MCF-7

◢ SRX13327976: MCF-7

◢ SRX13327977: MCF-7

◢ SRX13327991: MCF-7

◢ SRX13327992: MCF-7

◢ SRX13327993: MCF-7

◢ SRX13327994: MCF-7

◢ SRX13327995: MCF-7

◢ SRX13327996: MCF-7

◢ SRX6712570: MCF-7

◢ SRX6712571: MCF-7

◢ SRX6712572: MCF-7

◢ SRX6712573: MCF-7

◢ SRX822009: T-47D

◢ SRX822010: T-47D

◢ CBX3: STRING

PSMD6
CCDC200
BCAS4
FAM227B
DTWD1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TEX14
RAD51C
STX16
RNF24
POLR2J3
ZCCHC14
ACSF3
B4GALT7
BCAS2
USP32
LRIF1
PFDN4
PSMD4
HEATR6
GTF2H4
BRIP1
SGSM1
SMG8
KXD1
PDCL3
APPBP2
NCOA3
RAC1
ZMYND8
CDYL
MRPL3
CYRIB
TMEM41A
HES1
CCNT1
RNF216
HPS1
H4C14
GPSM2
BCL9L
OSCAR
NDUFA3
PREX1
H2BC18
CCDC71L
ALG10B
LUC7L2
FMC1-LUC7L2
PPM1D
KMT2A
ZNF217
XKR9
LACTB2
NOM1
CLPB
TIPARP
ARFGEF2
TOR1A
RHEB
ALKBH3
COMMD2
SLC29A3
ZNF335
DTD1
GK5
SORBS1
WFDC3
DNTTIP1
VPS37D
TPRKB
TDRKH
SNX16
CYP24A1
DSTYK
MAPK6
UBE4A
PPFIA4
ZCCHC4
ASCL4
TBX2
MINDY3
ARFGAP3
GNB4
FAM83D
ZNF391
USP35
KCTD21
DCLRE1B
AP4B1
PCCB
DYM
H2AC21
H2BC21
H2AC20
ZMAT1
SETD1A
DPY19L4
AP2A2
ARNT
WDR72
AP4E1
ZNF341
SNRPB2
RASEF
FMNL3
SMARCD2
WDR11
HIPK1
UBFD1
EARS2
PRMT6
ATAD2
ZNF3
ZNF302
LEMD3
ZDHHC24
ACTN3
FAM207A
ZNF638
THEM4
NAF1
MMP17
DDX18
ADRM1
SRRM3
RGS9
C7orf26
ATXN7L1
MYO5A
B3GNTL1
VPS29
RAD9B
DENND2C
NHP2
IMPACT
MLLT1
FRG1
TRIM37
DYNC2I1
NLRX1
CT45A10
SWSAP1
PEX3
ADAT2
LYSMD2
GPATCH2L
MARS1
ARHGAP9
SMU1
RNF114
N4BP3
WDR53
FBXO45
PAK2
REPIN1
MSL2
SNAI1
CMTR2
ATL3
MRPL39
NRAS
RRP15
VPS28
SEM1
BPTF
PTCD1
CPSF4
DGKZ
ZNF600
OPA1
ZNF280D
GTF3C5
PIK3CA
PRPF18
EIF3E
ATXN1L
BMP7
AARS2
BRAP
ACAD10
RBM39
SEH1L
L3HYPDH
JKAMP
DMAC2
WWP1
BCAS3
ERMARD
BCAP29
SRPK1
STX18
ZFAT
NHLRC1
NPEPL1
RASA4
ATXN7
KDM3A
CPPED1
WASL
TRIM33
ALG10
EIF2D
ZSCAN25
RNFT1
MTMR14
GTF3C3
FAM168B
SUPT4H1
SMN2
SMN1
H4C15
RBBP8NL
UBE2V2
WDR43
RUVBL1
CYREN
EEFSEC
H4C12
NCAM2
TMED1
ZNF16
ZNF239
ARPP19
SRRT
MIS18BP1
PCYT1A
DHX40
LRRC58
PARD6B
SIRT5
SULT6B1
RAB3IL1
MYL12B
GGACT
ZCCHC3
NEDD4
AURKAIP1
TMEM65
PPP2R3A
RIOX1
SLC27A2
TMA16
DECR2
TARS2
ZNF282
TP53I11
PPIP5K2
MTHFSD
ELOVL2
LRRC37A3
SSBP2
ATR
DDX59
COX16
JRK
SLC7A5
MKRN2
TAF1C
FGFR4
STXBP5L
SEC13
TIMM9
KIAA0586
TRDMT1
EPS15
RAB12
SIKE1
GRPEL2
SSBP1
CCZ1B
AAR2
ANKRD36C
DHPS
EFR3A
SLC22A23
SSH1
CPM
ZNF879
NBN
SLC25A40
DBF4
CORO1C
COPS4
FBXL18
PRKAB2
CHD1L
TTC21B
COX5A
KPTN
HECTD1
FZD6
RNF32
ZNF280C
SPTSSB
MTERF1
PDE8A
DNAJC25-GNG10
DNAJC25
REXO4
GLCCI1
LPIN3
TTC39C
SPPL2A
RPL31
GNAS
KRR1
TMEM168
SYCE2
MARCHF7
USP8
H4C8
TMBIM4
CSTF1
AURKA
ZNF276
VPS9D1
EIF3CL
EIF3C
GCFC2
H3C15
H3C14
LTBR
CIART
NPL
FAM133B
GPR160
NOXA1
TMEM170A
FAM174C
RGS6
ITGB1
C1QBP
C6orf226
MCCC1
FBXO4
ADH5
HERC5
GATAD1
DEF8
LIMS1
CTNNB1
NINJ2
RFC3
KLHL20
ADNP
RMDN2
DRG2
BCAS1
H3C13
VWA8
RNF169
ZBTB39
ZNF131
TAF9
RAD17
AK6
EEF1AKMT1
PLCG2
NAPEPLD
SOGA1
INTS4
ESRP1
KANSL3
TMEM71
PHF20L1
BOLA3
SYTL2
EBAG9
RBBP5
BMS1
SNX8
EYA2
NECAB3
H1-2
C14orf28
FAM110B
WDR74
MTRNR2L2
MTRNR2L8
KMT2C
TPD52L1
TRIP4
KDM3B
FKBP4
POLR3E
ACACB
IL20
C1QTNF6
SLC25A36
TRIB1
GREB1
RGPD2
RGPD1
SRI
ABCA3
ZNF185
BATF
RNF223
H4C11
MTRNR2L9
AFF1
SIK1B
SIK1
CRKL
CBWD5
JUND
TTC39A
CBWD3
DCAF10
METTL25
CCDC59
TACO1
VPS26C
H4C3
BLVRB
DMRT2
LSMEM1
CASP7
FAM3C
LATS1
DNPEP
SIRT4
ADARB1
CBWD6
ADAMTSL5
CCDC88C
FLOT1
FRA10AC1
FZD1
EEF1A1
TFF1
DECR1
KIF21A
FBP1
HSH2D
FOXK1
RPS7
AKAP1
SLC25A24
TMEM229B
PLEKHH1
SELENOH
LAMC1
ZC3H10
GRHL2
USP31
NPAS4
GRAMD1A
GTF2H2
NFKBIA
AGK
HMGB1
INTS12
GSTCD
RPS6KL1
DDIT4
WDR36
EXOSC6
NUF2
TRIM3
NME1
HTR5A
CST6
CLTC
RCOR3
MCF2L
TATDN1
NDUFB9
ZNF346
SEPTIN9
SPTBN4
UTP3
SKA1
CHPT1
NAT10
MAN2C1
PDCD6IP
ACIN1
SCRIB
USPL1
IER3
TCIRG1
BRI3BP
CALM1
USP30
RNF130
DNLZ
VWA2
RANBP2
FGFBP2
SLC33A1
KLHL12
CYP4F11
UPF1
RABGAP1
TARP
FOXA1
TUBD1
RPS6KB1
NBPF1
PKD2L2
CABLES2
NR4A1
RINT1
NDUFS3
KBTBD4
IVNS1ABP
ZNF485
MANEAL
EFCAB10
KEAP1
ACP6
ANKRD2
MRPL21
IGHMBP2
TBC1D19
H4C5
UNKL
INTS5
TPD52L2
RGL3
MICOS10-NBL1
MICOS10
CCNL1
PDE4DIP
ZNF212
UCHL5
RO60
PIK3R3
OBSL1
INHA
MRPS18C
HELQ
UNK
MRPL44
PMVK
ANXA9
FMN1
ADPGK
ZNF23
C8orf37
BOD1L1
MUC1
NOTCH2
CCNP
POLR3B
WASHC5
NSMCE2
TASOR2
SCARB1
PDZK1
SLC44A1
ISG20
NPEPPS
LSG1
POLDIP3
OAZ3
CLASP2
TUFT1
RFC1
ACAP2
MED23
NOL11
PPIH
SLC24A1
DSN1
GABPB1
TTC6
NUP107
HLTF
MTERF2
ZCWPW1
MEPCE
CYP51A1
RHOBTB1
RBM48
PEX1
PLEKHM3
FAM228B
SF3A3
DRAP1
C11orf68
PTP4A2
BCL3
FAM83A
LRATD2
SF3B6
RPS6KA2
MEF2A
TOP3B
COX18
FBXO34
SKIL
ZNF398
NCBP2AS2
NCBP2
SLC25A42
MTF2
SECISBP2
CRBN
MINDY1
PAXBP1
RGS10
PUM2
MRPS23
MAP2K7
NSUN5
TMED8
WASHC2C
RBM45
PRUNE1
TFAP2C
VIRMA
RBM28
PMPCB
DCP1A
TTC26
SULT1A4
SULT1A3
H4C2
TBCA
RPL37
TMEM101
S100A16
AFF4
NR0B2
PKIB
TTC14
TMEM183A
TRMO
CIB3
DMAP1
GTF2H2C_2
GTF2H2C
POLR2J
FMC1
EIF1AD
BANF1
RPS14
SNX10
NCOA1
RPL5
MRPS31
ALDH3B2
C3orf14
ATP5MC2
ZFYVE28
HAGH
FAHD1
AHCY
TTI2
H2BC4
H2AC6
FXN
DNAJC11
PSMB7
LMCD1
CSDE1
LARP1
TMEM242
NUP54
RPS3A
ZNF746
CPSF1
TXNIP
NIPSNAP2
PLEKHF2
SNRPE
UTP11
CFAP99
FBXW9
CCAR2
MS4A15
EIF3F
VTA1
NMBR
SLC35B1
LDAH
RMND5A
TDRD7
RBL2
SLC45A4
SEC22B
ZNF609
TSFM
CDC16
LRP12
LRRC59
SLC39A13
IMPDH2
NUP214
NDUFS7
TRIM59
ZNF385B
SAR1B
RAB40C
SENP1
PFKM
C11orf49
POLG
LAMP1
OTUD7B
BBS1
RABGEF1
ARL8B
WDR70
BSDC1
MRPL16
DET1
MRPL40
HIRA
GAS6
GNPNAT1
CXXC5
CHD8
MYO5C
HBP1
AP1G1
NOL7
GORASP2
MYL12A
IPO4
OSBPL8
CDK5RAP1
CCNC
AVPI1
PCBP2
MTERF4
CWC25
ZNF165
SRFBP1
EIF1
RMDN1
LONRF2
STK38L
H4C4
OXA1L
PPP1R12B
MTIF2
KDSR
TRPM7
TRIAP1
POMZP3
SLC3A2
NAB2
ADIRF
PRSS23
ZBTB37
ZNF799
SMG7
RBSN
ANKRD46
RGPD5
POGZ
GALK2
ELK4
C16orf91
KRT8
ESYT2
DDX41
ARRDC3
ORC5
RAD54L2
SCNM1
LYSMD1
NFE2L2
AMZ1
TBC1D15
TOR1AIP1
USP15
YIPF2
TIMM29
PUS7
BNIP1
GFM1
RNF19A
CAP2
SYT12
EDC4
PPP4R3A
ARL14EP
DOK7
MNAT1
PGLYRP2
CDC73
NOP16
HIGD2A
TMEM222
TFRC
HEXIM1
FUT4
CDH18
NDUFC2-KCTD14
NDUFC2
DHRS13
AKAP8
STXBP3
KDM1A
ANGEL1
TCERG1
PPP6C
ZCCHC7
P2RX7
RFX1
MRPL30
MITD1
SPOP
AIP
PNPLA8
DLC1
PARL
FLYWCH1
KMT2E
TMEM199
POLDIP2
IKBKG
EIF5A2
COMT
DNAJC10
C8orf76
HUS1
ZNF518A
MTRNR2L10
ACTB
ZMPSTE24
SLC29A1
LYRM1
GTPBP10
TUT1
THUMPD1
CSRP1
ZNF425
KRBA2
RNF139
PCM1
FANCD2
HEXA
TMEM251
MOAP1
TAMM41
PRKAG2
RPS20
PSMC1
DNAJB12
ZFP62
RGPD6
TNS1
RARS1
ZNF572
SNAP47
MICU2
JMJD4
KCTD11
TRMT61B
SLC10A3
RNF166
HNRNPH1
CTU2
ZC3HC1
NKIRAS1
TSPAN10
NPLOC4
NOC4L
DDX51
TTC4
POLR2H
HK1
SNAPC5
IFTAP
FAM214A
CATSPER3
SLC38A2
HSPE1-MOB4
HSPE1
HSPD1
YWHAZ
CRB1
H2AC19
H2AC18
TRMT12
VPS72
PSMD9
HPD
SLC44A2
CEP350
ZNF44
RPL27
MAT2A
SGF29
ARSG
NSFL1C
MRPL53
TMEM39A
CYP1B1
UBOX5
FASTKD5
CERS6
SNRPB
EPS8
BIRC3
MTBP
MRPL13
C10orf88
C12orf73
ID1
INO80C
ROBO3
MAPKBP1
CDKN2AIPNL
LETMD1
SSNA1
ANAPC2
ACBD6
SLC25A32
POLR1F
DCAF13
SLC37A4
RPF1
MRPL48
INKA2
DDX20
DHX8
KCTD5
IFRD1
ZNF721
PIGG
GPRIN2
RPS6KB2
MYZAP
GCOM1
AEBP2
H2AX
LAMTOR5
IMMP2L
IBA57
ARL6IP1
NAIP
MRPS33
USP36
ATP5MC3
NRBF2
TLE3
POLE4
DNAJC2
MRPS21
GBA
COPS2
KRT73
ATXN2L
UIMC1
NOLC1
GPAM
KANK2
RPS15
TOB1
AQR
VMP1
SNRPD1
PTRH2
EXD2
WASHC2A
SRSF2
MFSD11
RPA2
GTF2H3
EIF2B1
MOB4
NDUFA12
PPP3CB
KNTC1
WDR24
ODC1
DMTF1
OGA
UBE2Q1
EPN1
SDHAF3
TATDN2
MDM4
MAZ
PHF10
SMG5
SLC25A21
TPM4
SERPINA1
SQSTM1
ZNF823
AMDHD2
MYOT
ESR1
SEC62
DIABLO
NDUFAB1
TPR
TATDN3
ODR4
NSL1