ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186628 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX3010277: A549

◢ SRX3010278: A549

◢ SRX150381: GM12878

◢ SRX3009984: GM12878

◢ SRX3009985: GM12878

◢ SRX2423904: HeLa

◢ SRX2423905: HeLa

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◣ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX824619: LNCAP

◢ SRX824620: LNCAP

◢ SRX2423836: MCF-7

◢ SRX2423837: MCF-7

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

MTRNR2L9
RGPD2
RGPD1
SLC35E2A
MTRNR2L8
MTRNR2L2
MTRNR2L10
SLC35E2B
WDR74
MTRNR2L6
DNMT1
GPR108
PRCC
MTRNR2L1
CNOT6
PARK7
POLG
DPP9
POR
OGA
EED
CDIPT
PTOV1
TMEM260
SNX16
PPP1R10
MRPS18B
C21orf91
NOP56
IQCH
AAGAB
DLST
SELENOT
TAF15
CNOT4
C6orf226
HSP90AB1
TARDBP
LRPPRC
PIP4K2B
GNB2
PTDSS1
MTERF3
FLCN
PKNOX1
AKIRIN1
PAXIP1
CDON
KNL1
YY1AP1
DAP3
MYO9B
HAUS8
BZW2
ANKMY2
UIMC1
CFAP77
UCHL1
MED26
ANKRD13A
TADA3
ARPC4-TTLL3
ARPC4
AKT1S1
TBC1D17
HHIPL1
CCDC85C
FUS
ZNF219
SYN1
UROS
BCCIP
SRSF3
RPN2
MROH8
PHRF1
RAB11A
PFDN4
KCNAB2
PRKDC
MCM4
FBXO33
ATP8A1
NCOA7
PMVK
MTMR14
FKBP3
PSIP1
CSNK2A1
CENPE
PRKCI
TCP11L2
UQCRC2
NFE2L2
CDC25C
FAM53C
UTP18
MBTD1
PIK3R3
FRAT1
ZNF300
ATF4
SELENOH
CENPN
PRDX2
METTL26
NOL8
CENPP
USP15
SSBP1
CHMP3
MAPK1IP1L
NR4A1
NR6A1
WRAP53
TP53
HSPA6
DOHH
DOT1L
NUF2
SETD2
RMND5A
HYAL2
FRAT2
SELENOW
EEF1A1
RPL22
PRMT5
PAFAH2
INO80D
RBM39
USP11
NDUFB1
CPSF2
ALDH4A1
UFD1
CDC45
SNAP29
PI4KA
UFSP2
ZNF839
PLEKHM3
ATF7-NPFF
ATF7
CD164
RPL35
ARPC5L
BTG1
LUC7L2
FMC1-LUC7L2
FMC1
ARL6IP6
PRPF40A
PABPC4
SMC3
H2AC19
H2AC18
CUL2
ATG101
ZFAND3
ZNF335
TACC1
COQ10B
AP1G1
CDCA7L
WASL
SLBP
PPP5D1
CALM3
PPIB
PRDM10
WBP11
C12orf60
NDUFS7
DMAP1
BCL6
COMMD6
UCHL3
MGRN1
COPZ1
ZFP91
LPXN
EIF3B
UBE2B
CDKL3
SS18
PRCP
DDIAS
NR1H2
NDST2
SACM1L
HEXIM2
RHBDD3
EWSR1
RNASEK
OXR1
RHOB
SIRT4
HDAC2
RPL19
MRPL44
NFKBIZ
PRKAG2
POLR3E
FAM227A
CBY1
ZFP14
MYL6
MRPL1
EIF3F
NOCT
DGAT2
LSG1
ZBTB4
PSMD3
POLR2A
S100A13
CHTOP
ABHD16A
AURKAIP1
POLDIP3
LIN54
PBLD
HNRNPH3
POLR2J3
TIGD5
EEF1D
RAB28
RPLP0
SARAF
BCAR3
GOSR1
SPATA17
GPATCH2
KDELR1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SRSF5
FAM43A
RAVER1
HNRNPC
MED23
CLUAP1
INTS12
GSTCD
SHF
ALG10B
SYVN1
UBAP2L
C1orf43
DAZAP2
METTL25
CCDC59
TCF12
ZNF672
GOLM2
GBA
ARAF
ZBTB8OS
RBBP4
BCLAF1
FRA10AC1
CPLX2
PCBP2
SRCAP
LOC730183
FOSB
WDR36
IDI1
WDR37
SFPQ
WDR81
RCE1
CCNH
LTA4H
GTF3C5
RPLP1
MORF4L1
PKIA
ZNF207
BCL9
PRDX1
TIA1
WASF2
ZC3H7B
RANGAP1
PPP1R15A
MIB2
GABPB2
IMMT
SF3A3
ASH1L
CDK16
AFF1
RPS12
JUNB
ILF2
ZMPSTE24
DDX5
CEP95
TEFM
TAF13
BNIP1
PNN
FANCI
TSC22D1
HNRNPK
RMI1
TOR1AIP1
JRK
SMARCC2
ATXN7L2
MARK2
RNF103-CHMP3
UBA1
GET3
RPL13A
ANKRD17
CNOT10
TRA2B
B2M
TREX1
NDUFS3
KBTBD4
RLF
TMEM242
MYL12B
PPP4R3B
NFX1
SCYL1
USP48
P4HA1
SREK1IP1
CWC27
APTX
DNAJA1
SMARCD2
ID3
NDUFS5
IFT52
MBLAC1
PPP2CA
RPRD1A
NME1
MEF2A
STK35
PCNT
C21orf58
TRA2A
SRSF6
MPHOSPH10
MCEE
TM4SF1
MED16
IER3
FLOT1
RAB3GAP1
RCAN1
UQCRH
LRRC41
H4C5
TTLL7
DBP
RAC1
NPAS4
NANS
HSPA9
NSRP1
DRG2
RASSF1
ALOXE3
SH3PXD2A
PPEF1
PTCD2
MRPS27
FAM110A
INTS2
HDAC1
EIF1
GPSM3
STX6
SLC2A3
SLC50A1
PSMF1
PRMT1
MIA2
PABPC1
LMNA
SARS2
MRPS12
SSH1
TMEM258
FEN1
PAIP2
SDCBP2
KMT2D
USP3
RPS27L
SEC16A
C9orf163
TRIM39
RPL15
NKIRAS1
SELENOK
GFER
B4GAT1
NAGPA
ATP6V0C
FAM156A
RFX3
MYADM
PIGL
MYL12A
UQCRQ
GDF9
DIAPH1
MCL1
C8orf37
RGL2
FAM227B
DTWD1
RUSC2
MED31
C17orf100
NR1H3
ACP2
TUT1
MAN2C1
DNAJB1
NSFL1C
GFM2
SERPINE1
RITA1
DDX54
ZDHHC5
EIF3E
MRPL3
CHSY1
DCT
CCT5
ATPSCKMT
RMND5B
RAB11B
SLC38A2
CREM
SERINC3
MAFF
RGS2
ATF3
PARL
CTNNB1
SF3B1
DCAF10
FBXO31
NMNAT1
LZIC
FOS
ATG16L2
H2BC4
H2AC6
ZC3H6
KDM3B
RPS20
TNFRSF21
ZNF461
FOXJ3
SLTM
DUSP1
CSNK1A1
RBM17
ID2
TMEM263
FAM184A
YARS1
S100PBP
TNRC6B
MNT
NECTIN3
SLC9A1
MPLKIP
SUGCT
GPRC5A
SPARC
H3-3B
CCNL1
SUGT1
TIMM9
KIAA0586
FAM98B
RPL29
LENG8
RBBP6
ID1
DCAF8
KLF10
CPEB4
MNAT1
BICRAL
TBCC
CLTC
INTS5
GADD45B
RPS27
SLC35C2
ATP1B3
CKS2
GPATCH3
ZNF143
FUZ
RBM28
VTA1
NMBR
EGR1
NXF1
TATDN3
NSL1
HERPUD1
TTC26
SRI
FRMD6
STK40
RELB
ALKBH2
LANCL2
RPL11
EIF4A2
AHI1
KMT5B
DDIT3
REXO4
ZNHIT2
TRAF7
DGUOK
STAG1
GLRX2
IL11
PPP1R13L
POLR1G
RPL28
ZBTB37
TMEM175
GAK
NBPF10
TUBB4B
FOSL1
CHMP1B
BAG2
HDLBP
SEPTIN2
XBP1
PAXBP1
TACC2
YJU2
WDR31
ZNF865
SLC3A2
SRSF1
KAT7
UBE2D3
GTF2B
GPATCH2L
EIF1AD
BANF1
HEXIM1
FTL
SHOC2
BBIP1
PPP6R1
ASAH1
SMARCAL1
KNTC1
WDR45B
INO80C
PSMB3
PSMD14
ELL
RBBP5
MRPS18C
HELQ
TUT7
PDXDC1
MIA3
TXN2
NPM1
GSTA4
TANK
MFAP1
MOCS3
DPM1
TNFRSF12A
RAB7A
DISP3
PTP4A1
ZC3H15
PRR19
PAFAH1B3
COL6A3
DSN1
ARHGAP22
SIGMAR1
CCDC88A
STX18
LYRM1
DCUN1D3
SLFN5
SOD2
TIMM17B
PQBP1
RAD23B
ANKRD40
HMGN4
CARS1
STXBP3
ARF4
PRRC2C
MED15
ZNFX1
UBR4
POLR3D
DCP1A
TSPAN4
POLR2L
MRPS11
MRPL46
DNAAF3
PTCD3
POLR1A
LSR
EIF4A1
MAT2A
MTCH1
H4C11
RALY
COPS5
SRXN1
MRPS24
TST
MPST
GALNT10
BZW1
INAVA
H1-2
PTP4A2
H4C12
H4C14
H2AC20
H2BC21
TRAPPC3
MAP7D1
ZMYND11
SASH1
PRR3
GNL1
PSMA7
SETD5
H2BC18
ZDHHC2
H1-4
H3C13
CSTB
DUT
UBE2A
H2AC21
GTF2A1
FBXW4
PPM1L
PYGO2
LOC101928120
MAOA
SRPK2
GRIPAP1
ZNF639
GMNN
TPBG
ANP32E
PIF1
NFYC
CELSR3
H4C15
RPL41
H2BC5
RPS29
LARP4
ANKRD12
LRCH4
FBXO24
GIPC1
PPFIA3
C19orf73
EBF1
UPF1
CSDE1
TMSB10
PPIA
BRD2
HAP1
SERBP1
RBM8A
RCC1
H3-3A
MADD
POLR1B
ROBO1
NDFIP1
UBE2L3
H4C3
ATP5PD
H1-3
MBNL1
ATG2A
H4C4
H3C15
H3C14
KCMF1
TJP2
NSD3
KLF6
ERCC6L2
H2BC12
H2AC12
RNFT1
FBXL14
H3C2
H2BC11
H2AC11
SUPT4H1
PRMT2
RPS15A
CEBPB
ZC3H10
MEIS1
RPL10
H3C1
PHF8
KMT2E
MED13
GNAS
NUDT4B
NUDT4
HECTD1
HNRNPU
CACNA1F
VEZF1
PDIK1L
H2BC15
H2AC15
ESRRG
FCHSD2
H4C1
TMEM219
SF3B4
OAZ1
PRRT1
PPT2
STRIP2
NASP
UBC
ACTR3C
TOP2B
WTAP
DNAJC28
FNBP4
HNRNPA3
ZNF687
MAST4
C19orf48
TUBA1B
TUBB
H3C6
H4C8
EIF4G2
CYTH2
CEP63
ANAPC13
PTPA
CRAT
HNRNPH1
LRRC61
TBX3
PCIF1
PLEKHG5
MRPL51
SRSF7
H2BC17
H2AC17
NIPBL
TP53RK
KLF7
EFCAB2
UBE2J1
TOX4
RAB2B
VCL
RPL12
GDI2
HNRNPUL1
LSM14A
CALM2
LRSAM1
EIF5
FTH1
ACTB
DDX42
HSPB1
MYT1
MCM5
MAML1
ATAD2B
RPL13
MEPCE
SCAND1
H2BC8
H2AC8
MDM2
CXorf56
CCDC47
FUBP1
DNAJB4
CNOT3
OARD1
MFSD11
EIF4B
WDR6
MTREX
DHX29
NFYA
PHLDB2
FAM160B1
SUCO
LATS1
H2AX
WASF1
CDC40
BAZ2B
HMGB2
RPS3
NCAPD2
DDX39B
HMGN2
H2BS1
SRSF2
DDX19B
NSMAF
RBM12
CPNE1
IER5
SUPT5H
WDR26
SYNCRIP
MAP3K20
ATP5F1B
HCFC1
PPP1CB
FHL2
CDV3
CDT1
RPS3A
NARF
RPL18A
NOTCH2
ZWILCH
RPL4
TAF1D
PPP2R5C
C11orf54
MTDH
PSPC1
ISG15
NCL
IRF2BP2
UBTF
HNRNPA1
CBX5
FKBP5
ASF1A
AARS1
SYF2
H3C10
NAA25
RPSA
MAP2K4
ZCWPW1
HMGB1
CUL1
ITGB1
RPL22L1
NR2F2
NBN
GTF3C6
KDM2A
SLC25A25
NAIF1
ACYP2
TNPO1
POLR2M
CTNND1
EEF2
HMGA1
IER5L
TMEM131
H4C6
TOP1
TLK2
ARIH1
YTHDF3
ACTG1
MARCHF7
JUN
STAG2
UBE2M
ZC3H4
CEP350
TMSB4X
RPL3
H2AZ1
OTUB1
TNPO3
MMADHC
PPP4R3A
GADD45A
PAICS
USP54
SLC20A1
DDX6
CEBPD
ABLIM1
EIF2S2
PFN1
GOLPH3
DDX17
FOSL2
RBM22
HNRNPA2B1
SERP1
EIF2A
RNF7
RACK1
NPC1
CCDC200
SKP1
TPM4
LAMC1
NABP1
TAF5
PTPN9
RPS11
RPS2
PPM1B
ENSA
TPRA1
MATR3
CIRBP
CBX4
HIF1A
AKT2
YWHAZ
PRRC2A
RPL10A
CITED2
RPL21
TUBA1C
DHPS
ANKRD52
SYPL1
PWWP2A
ZCCHC3
SPAG9
HINT1
SP3
H4C9
CRKL
VEGFA
H3C4
MYOF
MORF4L2
TRIB1
AZIN1
SON
GART
RPS23
ATP6AP1L
ZFAND5
AP3S1
MIF
HSPA8
SMC1A
RIBC1
USP25
ST7L
CAPZA1
ZNF319
USB1
RPL8
H1-5
SFT2D3
PWP1
SEPTIN11
PIGO
ATP2A2