ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916933 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◣ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX8512760: HCT 116

◢ SRX10382406: hESC H1

◢ SRX10382407: hESC H1

◢ SRX10382422: hESC H1

◢ SRX10382423: hESC H1

◢ SRX10382428: hESC H1

◢ SRX10382429: hESC H1

◢ SRX10382442: hESC H1

◢ SRX10382443: hESC H1

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
FOXJ3
MTRNR2L8
POLR3E
BRAF
NCOA7
H4C8
UBE3C
ATXN2L
ZNF839
SACM1L
TIA1
MVK
PGK1
SLC35E2A
PPP6R3
PRMT5
METTL26
EEF1A1
PDE4A
BCAR3
NPAS4
B4GAT1
MTRNR2L9
SLC35E2B
SHF
LTA4H
HSPA6
POLG
PSMB3
APOA1
GSTA4
KNL1
VPS37B
LUC7L2
FMC1-LUC7L2
FMC1
CREBBP
FAM71E1
EMC10
GBA
HECA
RBM23
ING3
RGPD2
RGPD1
NDUFS7
ILF2
C8orf37
RABEP1
WDR74
RFX1
TXNL4A
SS18
RANBP2
DPP9
CCDC107
PAK1
RNASEH2A
TRIM41
RAB11A
HOMER1
EFTUD2
CCDC103
ATP1B3
ZBTB21
HES4
DCT
HMGN4
DYNC1LI2
NOCT
JOSD2
EIF4A3
JARID2
GNB1
HSPE1-MOB4
HSPE1
HSPD1
DPH6
YTHDC1
RNASE4
ANG
TMEM259
ANKLE2
RPS29
SMURF1
CDC42
CCDC200
UBB
PAXBP1
RALGAPA1
ELL2
HINT3
RPL9
LIAS
AP2A2
USP36
LYNX1-SLURP2
LYNX1
POLR3F
DZANK1
SMARCC2
ARIH1
GOSR2
IPO13
SUDS3
PPIL4
ZNF547
TRAPPC2B
WDR45B
FBXO31
BCL6
SSU72
CLCN3
CD164
CENPE
RTF2
COMTD1
PPP1R21
RRNAD1
ISG20L2
MRFAP1
COX19
CDC14B
SNX16
CWC25
ATP9B
TPBG
JOSD1
SMC2
ADARB1
LOXL3
DOK1
HADHB
HADHA
DOT1L
WBP4
ELF1
MAPKAPK5
BZW2
ANKMY2
UFSP2
ILRUN
GARS1
RBKS
BABAM2
TSPAN31
LOC101928764
SYPL1
UBE2B
CDKL3
GUF1
ZNF891
ZNF10
ORC5
OXSR1
TRIM33
TLE1
TRAF4
ZNF219
IQCH
AAGAB
PRMT9
THRAP3
COQ7
EIF4ENIF1
DLST
PDXDC1
STAM2
ATP8A1
ACTR10
CTDP1
RHBDD3
EWSR1
TEAD1
EPHB2
UROS
BCCIP
SRI
ZNF576
IRGQ
PSIP1
OR1F1
ZNF300
MLLT10
NDC80
METTL4
TPT1
STK19
DXO
EMD
RPL21
NOP56
H2BC10
PSMD1
APTX
COMMD1
CCT4
LYRM4
FARS2
CACTIN
DCTN1
MTRNR2L10
OPA3
PRKCI
POLR2M
CAPRIN1
DENR
RHBDD1
PAXIP1
FIGNL1
ANKRD13A
HROB
IQSEC3
C21orf91
NDUFA10
USP15
VPS37A
CNOT7
RPL14
SETD5
AHCYL1
VARS1
PRDM10
PKNOX1
ESYT2
RPUSD1
CHTF18
STK35
SELENOW
LIMA1
FRAT2
REXO1
PARK7
KDM3B
NUP205
LASP1
MYO9B
HAUS8
MBD3
TRAPPC3
MAP7D1
TMEM250
DGAT2
NDST2
ZNF593
C1orf232
STK17A
FBXO34
POR
FKBP3
PSMG2
CEP76
FAM168B
PPP1R13L
POLR1G
CCDC138
ICE1
TIGD5
EEF1D
UBE2H
PAK1IP1
MIS18BP1
FDXACB1
C6orf52
C11orf1
FKBP1A
TCP11L2
ALOXE3
YTHDC2
C9orf72
SPOP
UPF2
POLR1H
ZNF540
ZNF571
IMPDH2
NSUN4
PHRF1
OGDH
PPEF1
HNRNPU
PDAP1
BUD31
RTKN2
NUDT18
METTL25
CCDC59
PPP5D1
CALM3
MAP2
RAB6A
NUDT15
MIA2
NOL8
CENPP
PPP3R1
CDON
ASAH1
KANSL1
PTDSS1
MTERF3
FLCN
CENPN
TIMM22
KCNAB2
CCNL1
ALDH4A1
NUP58
ATG16L1
STX6
GOLM2
PEF1
CEP78
BRPF1
NUP85
CSNK1G2
ZFAND2B
TMEM242
HGC6.3
BCAS2
EOLA2
SLC35B1
C5orf15
SPATC1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IBA57
NDUFB1
CPSF2
ATG16L2
FRAT1
HSP90AA1
PFDN4
TMEM260
RTRAF
NUF2
UBE2I
COX18
UBE4A
CCDC71L
ARHGAP22
XPNPEP3
ST13
LSR
MED23
SIK1B
SIK1
ATP5MC2
EIF1
B4GALT7
VDAC2
MOB4
RAPGEF1
C15orf48
STK38L
KPTN
ING4
ALKBH3
OXR1
R3HDM2
COPS7B
DHX15
STAM
RAB11B
RAD51AP2
PACRGL
KRT6B
U2AF1L5
U2AF1
FAM53C
CDC25C
USP1
LEKR1
RBM17
FEM1A
KMT2A
PPIB
SNX12
PSMA7
CNOT6
GNB2
C19orf48
USP37
CNOT9
ENOSF1
CPLX2
MAP1LC3A
KCNMA1
PIK3R3
DOHH
HDAC2
C12orf66
CDC73
SMIM8
POT1
GPAM
DHX36
ALG10B
SYNCRIP
UNK
TRIM39
TSN
HSD3B7
URB2
TAF5L
UCHL3
COMMD6
SH3GL1
SPAST
ANKEF1
ELOVL5
RAB10
FAM227A
CBY1
IFT52
TRIP4
SPTY2D1
ARL8B
ABHD6
TST
SKP1
RAB37
MPST
CCDC83
GGNBP2
PNO1
MIA3
TADA3
ARPC4-TTLL3
ARPC4
AARSD1
USPL1
HMGB1
RABL2A
MTF2
IDH3B
NRBF2
NVL
CBWD5
CBWD3
GMPPB
ZNF628
VTI1B
FUS
ERCC1
UBE2Q1
ZSWIM7
TTC19
DUT
SETD1A
NUDT4B
NUDT4
VIM
CBWD6
TAF9
SUPT7L
SLC4A1AP
RAD17
ARAF
AK6
MNAT1
TMED1
MRPS24
FAM160A2
CREB1
XRCC6
DESI1
TBCK
AIMP1
NBEAL1
ST7L
MRPS5
CAPZA1
RNF139
PROSER1
NHLRC3
NEMF
RNF126
RNF166
CTU2
CYCS
C8orf33
LYSMD3
TES
SLC25A26
KRTAP9-2
TMEM222
SUSD6
CCDC88A
C10orf95
OGA
ZC3H11A
WASF1
CDC40
KRT6C
CD24
UIMC1
MED4
LPAR6
EIF3F
HPS5
GTF2H1
FGGY
BRD4
RPN2
OAZ3
MROH8
PNPLA8
TSFM
RTTN
NDUFC2-KCTD14
NDUFC2
EED
PRMT1
MAML2
LRP2BP
ANKRD37
RNF215
MAPRE1
LRIG2
KIAA1586
MYL12B
FOS
OMA1
DAB1
FAM200A
TTC30B
PEX3
MTREX
DHX29
ADAT2
RAD23A
RPL22L1
ARHGEF7
ASH1L
TMEM161B
RNASEK
PLEKHM3
GPR108
CDCA7L
RBM42
TTLL7
CREM
MKRN2
ITPRIP
EIF2D
TNFAIP3
RUVBL1
RBM48
PEX1
HAP1
EEFSEC
CCDC6
YY1AP1
DAP3
GALNT10
CCDC90B
BCAP29
ZNF76
SFSWAP
SCRT1
LYRM1
DCUN1D3
CTCF
H2BC11
H2AC11
AIG1
PIP4K2B
ATG101
MET
ERMARD
COMMD9
PIGF
CRIPT
RPP14
LRPPRC
LMAN1
HTD2
MRPS28
MAP3K2
LANCL2
AFF1
BTBD9
DDX5
CEP95
TLE4
VEZF1
PUM2
PHTF1
ZFAND5
PERP
RICTOR
CD55
PPM1L
TEX14
RAD51C
ZFAND3
UNC79
BTBD7
FBRS
STX16
NOTCH2
VTA1
NMBR
LRIF1
BZW1
RAN
ICE2
RNF19A
ZNF335
TMEM41A
C1D
ZNF35
CBR4
USP2
KRT6A
ARRDC3
PLK2
ARID2
ZFAT
PGAM1
MUC1
SCAP
ADCK5
CNOT2
BRD3OS
WFIKKN1
SSBP2
ZHX3
GLIPR1L2
ZBTB37
OSGIN1
BAIAP2L1
GFI1B
HEXIM1
BTBD2
ANO7
GCNT3
BSPH1
SMARCD2
CXXC5
PBX2
SBNO1
STXBP1
HDDC2
CUL3
PBX1
ULK1
SP4
TRAPPC9
ETS2
PXDN
CAPN12
TTI1
RPRD1B
IFI27L2
IQUB
C4orf19
USF3
CIB3
USP22
SPRING1
RNFT2
UBE2L5
PRELP
KASH5
ESRP1
SCYL3
KCTD9
CDCA2
COTL1
JRK
SETDB1
SMARCD3
H3-3B
CDK18
SHPRH
SLC29A4
LARP1
CACNG6
TRIB1
SYNGAP1
MRC2
APOBR
NPRL3
ATXN7
ZNF512B
PRPF40A
ARF3
MTRF1
SMG7
VLDLR
SIGIRR
MSRB2
C10orf67
SUZ12
SPIRE2
C17orf58
DSTN
BFSP1
PI16
PRR12
USP34
TLCD1
SLC8A2
PHF21A
BIRC7
MTMR4
LRRN3
TMEM65
ARFGEF2
CATSPERG
RASSF2
ZNF524
FIZ1
SP3
DAZL
CBLC
USP38
BCAS3
JPH4
INTS9
HMBOX1
TUBA1C
C17orf64
TLK1
SP1
RNF43
USP32
KCTD13
POLK
CERT1
MSI2
MEAK7
FOXJ2
LARGE1
APPBP2
ARL6IP6
ACTR3
CLTC
ALKAL2
TFEB
MECOM
SP2
NAV1
CMBL
CAP2
CACNA1S
RSF1
AAMDC
FOXA2
C16orf72
ITPR1
MYADM
NIM1K
NAP1L5
RPH3A
EFCAB2
CDC42EP5
CTCFL
CST3
KCNQ2
ZNF148
AP1S3
OCLN
FBXL19
LHFPL2
IGLON5
GREB1
DDI2
GABRB3
MED6
SATB2
NPEPPS
PHF23
RCAN3
FOXK1
PCBP2
ADNP
RASSF5
NKX2-1
DYNLL2
OR10H5
POU2F1
IL26
PRDM11
TXNIP
MDM4
ZNF205
CNPY1
KLK7
KCNK15
GTF2H4
TAF6L
FBXO11
SERPINA3
PI4KB
LHX6
VNN2
BRD2
TBC1D22A
PPM1D
DHX34
BBX
ATXN1
CREBRF
SIGLEC15
ZFR
AHCYL2
SKA2
PRR11
HSD17B14
PLXDC2
LMNB1
PTPRH
ADAMTS9
VILL
PLCB1
LAMC1
TMEM170A
HERC4
CA11
BRIP1
AMZ2
SMG1
PABPC1
HMGB4
RALY
BCL2L2-PABPN1
BCL2L2
KCNN4
HMGN1
KMT2E
LRATD2
CROCC
WDR26
MEF2C
TSC22D1
AAAS
ARC
GNG8
WBP1L
STAT6
LMBRD1
ERICH6
GTF2IRD1
DCUN1D2
SBK2
BMI1
PPP2R5C
MRGPRE
RUNX1T1
BCAP31
ABCD1
PRPF40B
ORC4
MBD5
KLK6
SLC25A19
NCOA3
CCK
HOXC11
GZMM
ZNF131
GRP
APCDD1
SEC13
ERF
NTNG1
SOCS2
PHF2
ATP4A
MSRB3
MRPL38
LDB2
HUS1
S100A16
MADD
PTGIS
DDX59
SCYL2
DEPDC4
PRAC2
PRAC1
DOK5
RIPOR3
RARG
TRA2A
KLHDC10
ATXN7L1
ZEB1
SHOX2
KIF6
TMC4
ROCK2
PDE4DIP
TMEM126A
GATAD2B
ZNF574
TMEM271
SLC6A1
NFAM1
KCNIP2
GNAS
TAF7L
PPP1R16A
COL20A1
PHF7
BAP1
PRRC2B
ID2
RIMS2
NPC2
ISCA2
CAMK2D
RNASEH2C
IRX6
TM4SF1
TMEM30A
RBM27
GDF6
ARRDC4
CAPN1
GABBR1
E2F3
ATF7-NPFF
ATF7
SEZ6L2
ASPHD1
UNC80
EFS
TLCD3B
LIN7A
UBTD2
SERPINI1
PDCD10
ARHGAP39
KSR2
CDKN3
TFAP2A
TRAPPC2L
KCNB1
GALNS
DNAJC27
MTOR
KRT8
DPEP1
TCL1B
MELTF
SDC2
LHX4
TASP1
GJA1
GSC
ANP32B
CIART
AJM1
PTK6
NPIPB15
TNPO3
GET4
CFAP410
WNK1
SIPA1L1
IREB2
CYP4F11
COLEC11
C1orf21
AURKC
TPRX1
TMEM26
NUDT16L1
DUSP4
ZNF384
HSPA1L
HSPA1A
CPNE6
RGS9
FADS2
FADS1
CXXC4
MARCHF6
PDE1B
PRAME
PAN3
DICER1
ADRM1
RNF41
CTDSP1
PRSS22
MYOZ3
NUCKS1
GABPB2
EIF4B
RAP2C
HIF1A
RORC
RIN2