ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423837 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX3010277: A549

◢ SRX3010278: A549

◢ SRX150381: GM12878

◢ SRX3009984: GM12878

◢ SRX3009985: GM12878

◢ SRX2423904: HeLa

◢ SRX2423905: HeLa

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX824619: LNCAP

◢ SRX824620: LNCAP

◢ SRX2423836: MCF-7

◣ SRX2423837: MCF-7

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

SLC35E2A
SLC35E2B
PFDN4
PRKCI
PTDSS1
MTERF3
PDXDC1
DUX4
ZNF219
TMEM253
GIT2
ANKRD13A
FLCN
CMC2
CENPN
MYL12A
MYL12B
FAM53C
CDC25C
CDIPT
EIF3B
NOL8
CENPP
FBXO33
EED
OLFML2A
NR6A1
SMIM41
ATG101
TADA3
ARPC4-TTLL3
ARPC4
HDAC2
POLG
GNB2
BCL6
TMEM260
PIK3R3
FUS
UTP18
MBTD1
TIGD5
EEF1D
YY1AP1
DAP3
LSR
UROS
BCCIP
DNMT1
ATF7-NPFF
ATF7
IQCH
AAGAB
C21orf91
NDUFB1
CPSF2
WRAP53
TP53
SRI
FRG2C
BZW2
ANKMY2
INAVA
OGA
UQCRC2
LRPPRC
WASF2
PRCC
FOS
ASH1L
TAF15
OXR1
SPATA17
GPATCH2
DISP3
CNOT6
PAXIP1
CSDE1
PKNOX1
PPP1R13L
POLR1G
PPP5D1
CALM3
PSIP1
PRR19
PAFAH1B3
IFT52
SRCAP
LOC730183
MYO9B
HAUS8
FKBP3
FANCM
NDST2
DNAAF3
TNNI3
STK35
DGAT2
TTF1
CFAP77
RHBDD3
EWSR1
CDON
S100A13
S100A1
CHTOP
RNFT1
ATP8A1
TARDBP
PARK7
ARL4D
POR
FZR1
DOHH
RITA1
DDX54
CD164
PRMT1
HYAL1
TUSC2
HYAL2
USP15
ERCC6L2
UBE2B
CDKL3
C6orf62
ESRRG
PRPF40A
ARL6IP6
TSPAN4
POLR2L
CD151
MOCS3
DPM1
ZFP14
DLST
TRAPPC6B
PNN
UFD1
CDC45
CDK16
TBC1D17
PNKP
AKT1S1
MTCH1
FAM156A
BCLAF1
PMVK
ZFAND3
SELENOW
CDCA7L
UQCRH
LRRC41
RPN2
MROH8
SMC3
LOC102724770
DGCR6
PARD6B
KCNAB2
NOCT
BZW1
INTS2
UNK
H3-3B
GSTO2
TCP11L2
RNASEK
C17orf49
ALDH4A1
PRKDC
MCM4
SELENOT
SASH1
COQ10B
PTCD3
POLR1A
LYRM1
DCUN1D3
CNOT10
BRIP1
TRIM37
FRMD6
ART1
FRAT1
ZNF335
PRDX2
RNASEH2A
UBALD1
MGRN1
HDLBP
SEPTIN2
PSMD6
TOX4
RAB2B
RBBP6
TSKS
AP2A1
RMND5B
MED13
CSNK2A1
USP32
MRPS11
MRPL46
CCT5
ATPSCKMT
NFYC
SIRT4
POLG2
DDX5
CEP95
PPM1D
PCNT
C21orf58
PKIA
SS18
LARP4
FAM186A
GRIPAP1
DNAJC28
ZNF687
LANCL2
COMMD6
UCHL3
LUC7L2
FMC1-LUC7L2
FMC1
PPIA
EIF5
LRCH4
FBXO24
KMT2E
UIMC1
LIN54
GIPC1
DAZAP2
MADD
MIA2
MORF4L1
MAOA
TPBG
SYN1
CFP
SYVN1
PHRF1
NCOA3
KLF10
MAT2A
SNAP29
PI4KA
FRAT2
SHC1
PYGO2
PBXIP1
LOC101928120
ZNF285
HSP90AB1
SLC35B2
CENPE
SF3B4
MTMR11
APPBP2
AFF1
FRG2
DENND2C
HSPB1
UFSP2
C4orf47
HHIPL1
CCDC85C
TUBD1
RPS6KB1
ATG16L2
LRATD2
KLF7
CCDC200
WDR4
COPZ1
MTMR14
FAM227A
CBY1
TRIP10
GPR108
RAB28
ID1
SDR39U1
ROBO1
EIF4B
TRA2A
GSK3B
PPM1L
CEP63
ANAPC13
H2BC21
H2AC21
H2AC20
WDR38
RPL35
ARPC5L
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
ZDHHC5
SREK1IP1
CWC27
CLP1
NFX1
DPP9
YWHAZ
DDX42
CCDC47
MED26
MAPK1IP1L
RNF103-CHMP3
RMND5A
LSG1
WDR37
IDI1
PTCD2
MRPS27
HNRNPC
SON
GART
POLR1B
ETV2
COX6B1
NQO2
TRPM4
HRC
GTF2A1
PPP1R10
MRPS18B
ATAT1
TIMM17B
PQBP1
ZBTB8OS
RBBP4
CSPP1
COPS5
PTPN1
MRPL35
IMMT
POLR2J3
KAT7
HMGN2
UBAP2L
C1orf43
BCAS1
MICU2
RBM8A
PEX11B
RPL10
ZNF217
BCAS3
MEIS1
ZNFX1
SRSF6
PPP2CA
RBM3
FANCI
MYL6B
MYL6
PPP1R15A
PLEKHA4
NFKBIL1
DDX39B
ATP6V1G2
HEXIM2
POLD1
NR1H2
SLC35C2
PRCP
DDIAS
EEF1A1
NBN
TRA2B
TMEM219
PTP4A2
IQCE
ANP32E
RAVER1
ICAM3
PRMT2
STAG2
PPP4C
ALDOA
SRSF3
RBM39
CBWD5
STXBP3
CBWD3
CBWD6
AKIRIN1
PRR3
GNL1
TRMT12
CYTH2
PIF1
LIN7B
PPFIA3
C19orf73
SLC39A7
RXRB
RING1
HSD17B8
COL11A2
PPP2R5C
ANKRD12
SMARCC1
MNT
TXNDC11
SRSF1
EIF3E
PTOV1
RALY
SRSF5
INAFM1
ATP5F1E
ATF4
RPL11
RMI1
HNRNPK
TBX2
TANK
PIP4K2B
FAM166A
STPG3
TUBB4B
METTL2A
MORN2
DHX57
GET3
VCL
OSGIN2
C6orf226
TTLL7
UBE2A
CXorf56
HNRNPH1
VAMP2
TCF25
ZNF672
LY6G6F-LY6G6D
LY6G6F
ABHD16A
CLTC
SLC25A24
SLC3A2
INO80D
HIPK1
FTH1
TUFT1
ARAF
GMNN
HAP1
TMEM187
HCFC1
ARFGEF2
CHMP3
PABPC1
NCAPD2
MRPL51
CALM2
ZMYND8
PABPC4
ENSA
ZNF263
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
RAB11B
ZNF248
H3C6
RPLP1
H2BC8
H2AC8
GABPB2
DUSP1
SRXN1
SRPK2
UPF1
C8orf37
GNG14
DHPS
CNOT4
HNRNPA1
CBX5
MIB2
VPS45
PHF8
ZSCAN31
CLDN4
CELSR2
MORF4L2
HNRNPAB
CEBPB
HEXIM1
ZBTB37
OTUB1
BCAS4
RPS29
BOLA2-SMG1P6
ASAH1
ATP6V0C
AMDHD2
H3C13
H2BC18
PSPC1
SMC1A
RIBC1
DHX40
SETD2
HNRNPA2B1
CBX3
C3orf14
BRD2
CAP1
YEATS4
TMEM129
TACC3
SLBP
FNBP4
CYP2W1
COX19
SULF2
NCL
FAM110A
PPP2R5B
ATG2A
ERN1
CCNT1
VPS72
PIP5K1A
IER5
COL23A1
NARF
CYBC1
ANP32B
RNASE4
ANG
AZIN1
TBL3
RPS2
RPL3L
RNF151
NDUFB10
ELL
CPE
MED15
RPS11
RPL13A
ATXN7L1
YTHDF3
CELSR3
BMP7
SERBP1
ZDHHC20
HOMER1
PPP1R15B
SCAF1
RRAS
RPLP0
GCN1
EIF1
RHEB
ECH1
SMARCAL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PCIF1
SLC25A25
NAIF1
NR4A1
H1-2
LATS1
UBC
WDR6
TPD52L2
ABHD16B
TMEM79
SMG5
SYT1
NUDT4B
NUDT4
PPP4R3A
MUS81
CFL1
TINF2
GMPR2
H4C2
H4C1
H3C1
H1-1
PRMT6
ATP9A
ANKRD17
ARIH1
PAIP2
DOP1B
PCBP2
ZWILCH
RPL4
SNAPC5
TXN2
SDHAF2
CPSF7
WWTR1
PLCG1
EIF4A1
CD68
LOC100996842
DIDO1
RBM14-RBM4
RBM14
HSF1
BOP1
GID8
H3C3
H2BC3
DSP
H2BC17
H2AC17
H3C12
ACYP2
PTGR2
TRIM33
ZNHIT2
MRPL49
FAU
TM7SF2
MCL1
NASP
IST1
SLC39A5
RNF41
NABP2
RNH1
C11orf94
ZC3H10
RPL41
PPP4R3B
AP1G1
ZFP91
LPXN
TRIB1
ZNF706
TYW1
SBDS
LMNA
AEN
MARCHF9
CDK4
TSPAN31
AGAP2
HNRNPL
UXT
ELK1
KDM5C
RAB3GAP1
CFDP1
SCAND1
NUFIP2
HMBS
H2AX
DPAGT1
NEMP1
PSMD12
BICRA
NAB2
PMEPA1
RPL19
CACNB1
CUL2
NOTCH2
ING3
H4C12
H4C11
H2BC15
H2AC15
SLTM
TMEM190
TMEM238
RPL28
SURF2
SURF1
RPL7A
MED22
ZNF274
FBXL19
PPP1R14B
LOC114841035
FKBP2
VEGFB
WASL
HECTD1
SNW1
SFXN5
CSRNP1
CHD1
NOL11
SETD5
SP4
TOB1
CEP350
RGL2
PFDN6
SIVA1
ARL6IP1
ALG13
THAP9
SEC31A
UBQLN1
FCHSD2
PHB2
ING5
USP8
PTPA
CRAT
SRSF2
MFSD11
METTL23
XKR9
LACTB2
CSTF1
AURKA
SKP1
BRMS1L
RPS3A
ATXN2L
BCL7B
BFSP1
DSTN
ATP6V1G1
CAMSAP2
EIF2AK1
CHD2
ARPP19
SPRYD4
RNF7
ZZEF1
CYB5D2
BCL2L11
USP1
HES4
POLR2M
NPC1
NRAS
SLC50A1
EFNA1
DPM3
EIF4A2
TSC22D1
TOMM6
PRICKLE4
FRS3
TAF5
GABPB1
CLK1
PRDM10
FOSB
NAA50
ATP6V1A
DHRS12
CSE1L
KMT5C
HARBI1
ATG13
DDX6
TIA1
PCYOX1
USP22
GRK6
AFF4
PRR13
CD9
HSPA1B
SUCO
UBN1
GLYR1
MYO19
MAP3K2
PIGW
GGNBP2
PRC1
METTL2B
MED10
TARS2
UQCRQ
LEAP2
GDF9
RPL22
RNF207
MMADHC
STOML2
PIGO
METAP2
PMPCB
ZNF254
SKA3
MRPL57
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
PER2
FOXJ2
RTEL1
RPL12
LRSAM1
RPS12
PHF12
EIF2AK3
ZNF157
S100A10
TRAPPC6A
BLOC1S3
TST
MPST
CCNL1
ST20-MTHFS
NOP56
USP11
EIF2S2
UBE2D3
DDX59
MYC
PSMD8
SMG8
IPPK
RPS15A
TBCC
BICRAL
ATAD2
USP48
KDM7A
GPN2
GPATCH3
EGR1
SPAAR
HRCT1
ENOSF1
DDX3X
LMTK2
FUBP1
DNAJB4
NHP2
DIAPH1
NUCKS1
FAM43A
RBM22
FAM120A
LEKR1
TLK2
SERP1
EIF2A
PPP1R12B
UBE2T
DYNC2I2
XPOT
TMEM167B
WBP11
C12orf60
SENP6
NUP62
IL4I1
ATF5
TMEM43
CHCHD4
SPATA2L
TACSTD2
RNF5
AGPAT1
AGER
PIP4P1
PNP
PLEC
TUBA1B
PSMD14
TMEM258
FEN1
KMT5B
CTDSP2
TNFAIP1
IFT20
TRIQK
PRSS22
TUBA1C
CTNNB1
BTF3
CCT2
TEDC1
CRIP1
CRIP2
EHMT1
ARRDC1
ANKRD36
ZBTB11
RPL24
IVNS1ABP
IFRD1
LEO1
ATP1A1
MIA3
SUPT4H1
ATAD2B
MDM2
AMOTL2
RMDN1
CPNE3
ANKRD36B
CDC20
MBTPS1
CPEB4
MICALL2
KLF4
PWP1
SIN3A
SPATA2
MSL1
RIN2
ILVBL
ZCWPW1
PPP1R35
MEPCE
PWWP2A
RCCD1
PSPH
CCT6A
SURF4
PPM1A
TNRC6B
H4C9
H2BC12
H2AC12
H2BC11
H2AC11
HNRNPU
ST7L
CAPZA1
SUPT16H
ZNF668
ZNF646
GPR89B
TPRA1
HSPA4
NOP58
PRDX6
SENP5
TRIP11
RRM2B
ISG20
LPP
ARNT
CTXND2
USP54
ADAR
SQSTM1
PRPF3
SYNCRIP
SARAF
ARF4
NKIRAS1
TGM1
RABGGTA
FAM214A
EMC2
WBP2
MAN1A2
NR1D2
NUDT16L1
UNC13D
TRMO
TEX14
RAD51C
MTREX
DHX29
ACBD5
INTS8
SART1
PTPN23
NXT1
C14orf28
NET1
SF3B2
GAL3ST3
VMP1
PTRH2
NACA2
PSMC5
FTSJ3
UMPS
TOP1