ChIP-Atlas: Target genes

Potential target genes for CUX1

Query protein: CUX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424762 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CUX1's Target genes

◢ CUX1: Average

◢ SRX186609: GM12878

◢ SRX11668227: K-562

◢ SRX11668228: K-562

◢ SRX186627: K-562

◢ SRX20731966: K-562

◢ SRX20731967: K-562

◢ SRX2442518: K-562

◢ SRX2442519: K-562

◢ SRX2442520: K-562

◢ SRX2442522: K-562

◢ SRX2442523: K-562

◢ SRX2442524: K-562

◢ SRX3322072: K-562

◢ SRX3322073: K-562

◣ SRX2424762: MCF-7

◢ SRX2424763: MCF-7

◢ CUX1: STRING

MEIS1
PPP2R1A
ABR
TSHB
BNIP2
COX16
TUBD1
RPS6KB1
PLCD3
ACBD4
EIF2AK2
PPP1R3D
FAM217B
RGCC
BCAS1
FRG2C
SLC25A25
NAIF1
DUX4
SIRT4
CUX1
PCDHB3
KDM8
VBP1
KIAA1217
PHACTR3
WDR74
ESR1
SNRPD2
QPCTL
SLC30A1
PARD6B
NUDT15
LAPTM4B
SALL4
VCP
RPS29
FNBP4
ATMIN
TMEM214
PPP6R3
PAQR5
CLK3
COG3
RPS11
AASS
CYP24A1
WDR12
CARF
DENND11
CNPY1
SNRNP35
VPS16
PCED1A
RDH11
SEC22B
H1-2
SULF2
ZFHX2
THTPA
IRF2BP2
TMEM161A
RANGRF
WIPI1
TSEN54
CASKIN2
NXNL2
FBXL18
KPNA6
GSTA4
GMDS
CSTF1
AURKA
TMEM107
DHX37
BRI3BP
SNRNP70
SPAST
ZGRF1
LARP7
CNTRL
C5
SEMA4D
RIF1
UBE2D2
DIRAS1
CD36
MYLK4
ZHX2
GPD1L
PALLD
GLDN
POGZ
GSTP1
GTF2F2
FRG2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
AHCYL2
MTRNR2L1
TLE3
MAP3K7CL
CCT8
SLC25A24
PIGO
OR1I1
RGMB
CD55
FREM2
EXOSC5
BCKDHA
MAF
CCDC200
RAB11B
HEXIM2
PREP
SCCPDH
EIF4E
OS9
SEMA3E
ILF2
ITPKC
COQ8B
SLC6A3
MRPS23
BORCS6
BCL11B
FAM136A
RPN2
MROH8
DNAJC1
NTMT1
C9orf50
SRI
LIMK2
TBP
PSMB1
AKAP1
PFDN4
CRADD
COL23A1
TMED1
TMEM237
CAMTA1
TENM1
UBA5
ACAD11
PRR25
DEDD
PIH1D1
ALDH16A1
YY1
ZMYND8
TESK2
TMEM131
DHRS4
INTS8
TRIM55
TMEM161B
CPVL
CHN2
FTCDNL1
STX16
LSG1
TRIM37
KRTAP5-11
BCAS4
CELF2
B3GNT3
SLC35A3
ZNF570
ZNF569
NIP7
COG8
OR4D2
ADARB1
SND1
SLC7A8
RNF212B
KCNJ15
EXOSC2
PSMD6
PSKH2
ADCY3
RNF222
TMEM205
RAB3D
CCDC159
PIP5K1C
SAXO2
EFL1
KLHDC9
HNRNPA3
MCTS1
NIPSNAP1
MVD
BCAS3
SNW1
FNIP2
PRR13
NCOA3
ARPIN-AP3S2
ARPIN
PDE4DIP
MYO6
MTFR1
UBE3D
DOP1A
BASP1
RGPD1
ASIC5
TMCO6
ACTL6B
KLHDC8A
COPB2
RNFT1
MIOS
BFSP1
SMIM6
TMF1
CXCL9
ART3
VAMP1
SKA2
PRR11
SPINK1
MTO1
C17orf58
ANKRD33
WBP1
INO80B
IMMP2L
TMEM141
RBBP5
ABHD2
ZFYVE26
RAD51B
SLC26A7
TAF4
FAM160B1
PFN2
ZNF700
CTNNBL1
CUX2
GREB1
HDGFL3
SHMT2
RPS6KA5
DGLUCY
TTI2
SPTSSB
USP32
AHCY
ETFDH
C4orf46
RAPGEF1
IGSF5
SLC35A5
ATG3
SGPP1
ICE1
BMP7
H2BC15
H2AC15
ZFAND3
EOLA1
HSFX4
RACGAP1
VIPR2
ZNF585B
ACBD7
LATS1
HSFX3
APBA2
ATP2C2
OPRL1
LKAAEAR1
POLG
ALDH3B2
AGTR1
OAT
TTC39C
LRRC23
TXN2
TMEM225B
MMD
DET1
TLE4
ZNF410
TBL1X
NOP58
TRIM7
QSOX1
ATF1
IKBIP
APAF1
GGCT
LMNB1
ZNF263
VSIG10
ID2
NAP1L1
IBTK
FOXN3
SLC12A3
SH3BGR
GPBP1
SLC2A4RG
LIME1
APPBP2
HNRNPH1
LUC7L2
FMC1-LUC7L2
FMC1
PPP6R1
POLR3GL
ANKRD34A
PCM1
PPM1D
IFT46
SLC4A9
CCND1
TUBB4B
ZNF367
ATP5MC1
TUBB6
BTN3A2
CACNG1
DACT3
PAK2
PLA2G2F
AFTPH
SMARCD2
SFR1
TMEM211
UBE2C
CRLS1
TRA2B
PCDHA13
MARVELD3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PM20D2
PJA2
INTS5
AP2B1
SLC2A3
ACSS3
SPATA2
SNX20
ARFGEF2
OR2W1
SMYD3
CRYGS
MAN2A1
SERPINI1
PDCD10
CLN8
KBTBD6
IL20
CAP2
BAIAP2
FAM104A
C17orf80
ZFAND6
DCLRE1B
AP4B1
TXNRD1
VPS26C
TRIQK
TEX14
HES7
ALOXE3
RASEF
NCK2
R3HDM2
INHBC
SERPINA3
MTMR11
MKRN2OS
ACYP2
ATAD2
AARS2
KNL1
DHX40
UTS2B
CCDC50
ABCG2
FDX2
BATF
SH3GL3
CHGA
COPS4
RCAN3
CD276
ZBED9
GPR157
SIK2
RGPD2
HSPH1
IL18R1
BAHCC1
TAB3
PSME4
BRIP1
IQSEC1
VPS4A
KYNU
DCUN1D2
RPUSD3
FAN1
TRIP4
CHD1L
PRKAB2
CELSR3
KIAA1522
MMAA
MS4A8
SAMD1
ARNT
SRSF1
PSMB7
LPAR2
KRTAP3-1
POLR3G
MBLAC2
THOC3
DIO3
CRYAB
LSM14A
DIXDC1
MTFMT
HDAC8
PDCD6
CCDC30
NSUN6
ARL5B
ZBTB46
POLR2D
CEP78
GRN
PKM
HOMEZ
JTB
LIMA1
C14orf119
ACIN1
FAM72C
FAM72D
LRIG2
MTMR4
CDK11B
CDK11A
GATB
CNIH1
LENG1
SNX8
MUC3A
NFIA
AKR1B15
PSG9
ACTN4
DIAPH1
TBC1D31
PATJ
RIPOR3
EHD4
RERG
AIP
UBE2H
SPAG16
HIPK1
CLIP4
ZHX3
CCDC174
TXNDC16
PIKFYVE
TRIM69
RHOD
FOXD3
HIF1A
TAF9
RAD17
INTS2
AK6
ZNF623
FTSJ1
NUDT4B
NUDT4
GRB2
PRKCI
KLHDC4
BRINP3
RNF34
PDZRN3
NME1
PDIA4
SLC33A1
ATXN7L3B
FAM227B
DTWD1
FST
SPATC1L
CX3CL1
ZNF507
PRUNE1
MINDY1
KCNJ8
GPR21
CSNK1A1
POC1B-GALNT4
POC1B
GALNT4
GTPBP4
UQCRB
TMEM183A
FAM72B
SSBP1
TMEM125
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ATXN1
HOXB8
HOXB7
VAV3
ARHGEF6
RAD51C
ZMYM2
SHF
RNASE4
ANG
YWHAB
PNP
INSM2
GABPB2
PRSS41
COMMD2
WBP1L
CEBPG
S100P
CPLX2
HPS1
OPA1
EIF3C
DHX8
NOL11
SPAAR
MKS1
OTX1
RAB5B
HNRNPH2
GLA
TPD52
BCAS2
ZNF213
TMEM69
GPBP1L1
AADAC
RNF43
GRWD1
RGL1
ARPC5
GOLT1A
TMPRSS11F
KIAA2026
AP3M2
DYNC2H1
RBMXL1
PCBP2
MXRA8
KYAT3
CSTF2T
GNAI3
EPX
ETFA
ZNF385A
CSDE1
C2CD5
PHTF1
DCP1B
WDPCP
MDH1
MPP7
SNRPB2
HSH2D
C6orf89
ID1
IMP4
CCDC115
LIMS1
EIF2D
BAX
PPIL1
PMPCB
ITSN2
ZNF398
GARRE1
PRRG2
NOSIP
LSM14B
CLIP1
GNB2
HMGN1
ATF7IP
DARS1
EPB41L2
JPT1
SVIL
SLC38A2
ATG9B
ABCB8
HSPA1L
HSPA1A
MIEF2
FLII
SUPT7L
SLC4A1AP
TOX4
RAB2B
SEPHS2
ARMCX5-GPRASP2
ARMCX5
EXPH5
DENND4A
TBX4
POLR3E
IPPK
MON1B
EPHA7
EPO
FBXO7
USP2
CBWD5
CBWD3
SLC22A17
SETDB1
OR13C2
STX1A
ADAM17
KCTD3
C8orf37
RPL35A
IQCG
CLTC
ATP7B
AP1M2
ALG11
SGK3
AKIRIN2
CEBPE
SCGB1C2
SCGB1C1
GATA3
E2F8
LEO1
H3C8
H2BC10
HBP1
PRC1
PSME3
TM2D1
TPCN1
KLHL12
CEACAM7
C16orf54
ABCD4
OXSM
NGLY1
FZR1
SPATA9
RHOBTB3
TSPYL4
DSE
RMND1
ARMT1
STMN3
RTEL1
SPRED2
SNX12
NHP2
RPL24
KLRC2
TANGO6
ME1
OAZ2
GPR160
REN
DOCK2
PAXBP1
RSRC1
SHOX2
TUT1
IST1
USPL1
SPO11
HMGB1
FAM169B
CCNY
YJU2
LRRC37A3
TROAP
MKRN2
PSMC5
FTSJ3
WDR38
DSTYK
LDLR
RTF2
TARS2
TPR
ODR4
FOXI3
GOLPH3L
RTN4
MAX
NUP85
POLR2J3
PRKAG2
ELP1
ABITRAM
TPM4
CLUAP1
C16orf90
TBX3
PABPN1
DMRT2
TMEM139
CASP2
GET4
UQCRHL
SLC25A23
CRB3
ENSA
BCL2L1
BSDC1
ZNF713
SEMA3C
GDPD4
SMIM10L2B
ANXA7
MAPRE2
MEIKIN
GMEB2
ZP3
TMPRSS7
ABHD4
EIF3E
YWHAZ
CCNL1
HSPA5
ECHDC1
HMCES
NGDN
DNAJB1
TECR
TOMM40L
APOA2
CLDN4
SLC25A29
MINK1
ATXN7
ZNF337
WDR89
TRIM33
UROS
RBM8A
BCCIP
SEPTIN9
PALB2
DCTN5
WWOX
SP2
ZNF335
HSPB1
ZNF687
MTBP
MRPL13
H3C13
H2BC18
PPP1R42
ZNF750
UTP23
DDX41
ADA2
CSGALNACT1
SPAG1
GRHL2
THEM4
STOM
GTF2H4
FKBP3
FANCM
WASHC5
SNX11
NSMCE2
RPL23A
RAB34
LOC100287896
LIPT2
NPW
PEX7
SLC7A2
DENND2C
SLX1B
SLX1A
BOLA2B
BOLA2
NUP153
SLC26A2
SLC12A4
PDXDC1
ITPRID1
SERPIND1
KYAT1
UTP3
BAZ1A
GOT1
ZNF487
TMEM94
TCTEX1D2
EPHB3
SETDB2-PHF11
SETDB2
CAB39L
ZER1
ADPGK
SLC35E2A
NTNG1
SHC3
ZNRF1
PRKCSH
CCDC151
DEPTOR
PIGBOS1
PIGB
PDAP1
BUD31
SNX1
SIDT1
CIAO2A
ZNF3
SLC25A19
PRODH
LOC102724788
VPS37C
ABHD11
CBWD6
KIFBP
GOLGA7B
GDAP1
ARL14EP
RHD
MAFA
YPEL2
RNF216
OGDH
CALHM4
VTA1
NOP53
NMBR
KRR1
ZBTB20
LPIN3
RGPD8
RGPD5
RGPD6
SMG8
OTUD6B
AGR2
ADGRF4
RAB30
PDCL3
DTNA
ATG101
STAP2
MPND
METTL25
CCDC59
NTAQ1
ABT1
COG7
ZNF181
RBM25
ZSCAN32
ZNF174
TMEM71
THAP10
PHF20L1
LRRC49
LARS1
ATP5MC2
CYP20A1
DLG2
PC
TANC2
TRMT5
TMEM126B
SLC38A6
DAD1
ABCA5
RPL22
ZNF354A
C3orf49
TRPM7
KAT5
SLC35B1
H3C6
RABGGTB
HNRNPR
KHDC4
SENP2
PRKAR1A
MAPK1IP1L
FANCA
CSE1L
ZFP91
LPXN
RBBP6
URB1
FAM161B
COQ6
ADAM8
MDM4
UBQLN1
NRAS
OTUD7B
ZC3H6
MICALL2
U2SURP
ANKHD1-EIF4EBP3
ANKHD1
RPL22L1
RAB6A
PTDSS1
PPP4R3A
MTERF3
AP5S1
PCIF1
RAB24
PRELID1
DZIP3
CIP2A
GTF2H2
GPRC5A
FAM168A
PLD1
SMARCA4
COIL
SLC9A6
MRPL11
DCTN1
SAMD10
PRPF6
PUS10
PEX13
BOLA2-SMG1P6
C3orf14
C16orf95
DDX42
CCDC47
STPG2
DPP9
MRPS18C
HELQ
TSGA10
STRADA
SNRPE
PPM1E
C2orf15
AHCYL1
ZNF668
PTPN1
FBXW11
ASB6
ZNF646
UXS1
SPG7
NUDCD1
C7orf50
ARL6IP1
AP4E1
BMS1
NBPF15
TBC1D32
SLC25A36
MOCS3
DPM1
CDK20
PRKAB1
DHRS13
FAM220A
UACA