ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
ADNP
TRIM3
MTRNR2L2
MSH3
DHFR
PLCB4
RTBDN
MAST1
POLR3B
MTRNR2L8
ARL14EP
MYADM
BMP7
MZB1
SLC23A1
METTL25
CCDC59
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL44
C9orf152
PCCA
REXO4
ADAMTS13
ARHGAP40
ERGIC1
EXOC2
PSMD6
S100A16
MOB4
TMEM87B
AFF4
KRT8
KRT18
WDR74
COL23A1
CUEDC1
GNPNAT1
STX16
TACO1
SPRYD3
NOL11
ZNF500
PMF1-BGLAP
PMF1
UCHL5
RO60
TARS2
ZNF609
MUC5B
BCL3
BAZ2A
TTC39A
NOTCH2
PMEPA1
SMG8
IQANK1
FAM83H
MUC3A
PAQR4
KREMEN2
ARHGAP39
KMT2C
N4BP3
PLEKHG2
TOP3A
SMCR8
FAM221A
SCAMP1
DUX4
ZNF217
SKA2
PRR11
CYRIB
FAM20B
USPL1
HMGB1
SNAP29
PI4KA
INKA2
DDX20
MADD
REPS1
ALG8
MAMDC2
DNAJC10
GNAQ
DYNC1LI1
REXO5
ERI2
EMB
DSTYK
IPPK
EIF1AD
BANF1
LDAH
GGPS1
ARID4B
MTRNR2L1
MED23
GRK6
EED
SCARB2
FAM47E
SEC16A
C9orf163
CEP63
ANAPC13
ZNF860
OSBPL10
MARCHF7
ZNF408
ARHGAP1
DPY19L4
TPD52
BCAS2
DUSP6
EDN1
HIPK1
VPS13B
ZG16B
LEMD2
SNRPB2
FAM207A
TRIM48
SPOP
TRIM37
CPNE8
RPS7
ZNF518A
NDUFS3
KBTBD4
SMIM14
FLNA
RUSC1
RBBP5
ZC3HC1
WDR24
USP32
PSMB7
LSG1
TBC1D30
INTS12
GSTCD
ECT2
ZMYND8
DCAF10
TMEM199
POLDIP2
BCAS4
FAM227B
DTWD1
SLC25A36
TOB2
TOR1AIP2
TOR1AIP1
NEK5
CNOT3
GSE1
NQO1
USP38
MLPH
ID1
WDR11
NECTIN1
ATP5MC2
CNBP
BLOC1S5
CARMIL1
AP1M1
PPM1H
TAFA3
PPM1J
PMPCB
PGK1
APPBP2
AP3B1
SCYL3
TFF3
STMN3
RTEL1
WDR97
MAF1
RBSN
MEF2A
CXXC5
TMEM210
LRRC26
TEX14
RAD51C
SPHK2
RPL18
FAM83E
NOXA1
IFRD1
DEDD
CHD8
COMMD2
KANSL3
FER1L5
TRIM33
GABPB1
DNAJC25-GNG10
DNAJC25
GSPT1
PRMT6
SWSAP1
FFAR2
CPOX
UNK
H3-3B
MICA
ARL8B
SLC39A6
ELP2
CCDC200
MUC2
CYREN
PHF14
PCYT1A
SCNM1
LYSMD1
SLC34A3
RNF224
ADPRHL1
PLXNB2
UST
PLA2G15
SH3YL1
ACP1
MRPL1
SULF2
KRR1
RASEF
KMT2A
SYNGR2
MRPS33
ZBED8
DGKA
PDE8A
TTC6
FOXA1
OTUD7B
PPIP5K1
CKMT1B
H2BC21
H2AC21
H2AC20
DEXI
CLEC16A
TLNRD1
NRAS
TSPAN13
TMEM183A
SLC33A1
LNPEP
TCAF1
TOP3B
USP9X
LUC7L2
UTP25
ALG10
SETD9
ZNF446
ATAD2
PPM1D
ZFP62
PMVK
EEF2K
TMEM251
MOAP1
EPHB3
SNRPB
PSMA5
NBEAL2
CCDC12
CLTC
VMP1
PTRH2
KAZALD1
LRP6
ALG10B
TSEN54
CASKIN2
DDX59
BRIP1
PPP2R5E
INTS2
ZNF410
BRINP3
EGR1
CIAO3
PPIP5K2
TBPL1
RPL37
PPP3R1
RPS29
ZNF197
MMADHC
GSK3B
BCAS3
TRIP4
KMT2D
FMO5
PDS5A
FRG2
BZW1
GRIK3
PTPRN2
ZBTB7B
PLCG1
LINS1
ASB7
KIF26A
HNRNPA2B1
CBX3
NCOA3
ADH5
HEATR6
MON1B
ATR
SGPP1
LSM5
AVL9
YIF1A
TMEM151A
SLC24A1
PDE4DIP
PSMC5
FTSJ3
B3GAT2
GNPDA2
NPM1
TPTE
TPD52L2
ABHD16B
ATXN2
NEDD4
RAB1B
RCAN1
ERCC6L2
TOMM22
CRNKL1
CFAP61
RPL12
LRSAM1
DDX23
KIF22
TANC2
RHOH
NPAS4
KMT5A
ETFA
RABGEF1
FAM110C
SIRT4
PRODH
LOC102724788
RPS6KB2
WDR93
PEX11A
C6orf89
HSFX3
NSUN5
HSFX4
ZNF106
SNAP23
FRG2C
ARG2
CPLX2
CALHM4
HTR5A
MTFR1L
TRIB3
BCAS1
ERN2
IQSEC3
MFSD4A
SLC45A4
EIF2S1
ATP6V1D
RHCG
ZDHHC1
MED26
TGFB3
RACK1
FBXO46
MKRN1
CCPG1
C15orf65
DGKZ
ADARB1
ZC3H10
RPL41
TRMT12
PPP4R3A
TBX2
ECH1
DHTKD1
MXRA8
METTL3
TECPR1
MTMR12
NR1H3
ACP2
SPO11
HSH2D
H4C8
PARD6B
RPS26
FOSL1
TXNDC11
CAP1
KLC1
PPP1R11
INSM2
DMTF1
CCDC174
SLC25A40
DBF4
SLC35A1
TNS4
RPEL1
RALGDS
UBE3C
SLC39A1
CREB3L4
ZNF655
SPTBN4
BLVRB
CYP2J2
ARID3B
IDH3A
CST3
IER3
FLOT1
FKBP4
PFDN4
FLYWCH2
CRACR2A
OPRL1
LKAAEAR1
TEP1
FAM24A
DEF6
SNRPA
C19orf54
DHX8
PRORP
PPP2R3C
TMEM95
KCTD11
TRIB1
SLIRP
ALKBH1
DPF1
UBA1
SRMS
RAPGEF6
ARID4A
PERM1
CKS2
ZKSCAN2
RRM2
NAB2
UBC
ARPP19
NBPF1
GREB1
ZNF681
RPSAP58
TFF1
BAIAP2
CYB5R4
RNF139
MICALL2
CCNL1
NCBP2AS2
NCBP2
ANAPC15
BARHL1
RPL32
COMT
VPS26C
SUMO3
MYBPC3
RBBP8NL
ESR1
HDAC11
HCAR1
LRRC31
DHRS3
ANO7
TPK1
SAPCD2
NKX1-1
HES1
DDX42
CCDC47
AKAP1
PTPN1
MRPS11
MRPL46
NUCKS1
SMS
LIN54
PNKD
PABPC1L2B
REM2
TPD52L1
ING4
LHPP
CHD4
LLGL2
SLC25A24
PRR7
FAM107B
RPL35A
IQCG
ODC1
CD59
KPNA1
RARA
CST4
UGT2B15
ZNF335
ALDH3B2
FANCF
TMEM30B
PDE4D
ARFGEF2
FNBP4
CYP4V2
PLEKHF2
MTOR
RBM19
ADCY4
DPM2
HMG20B
PPIH
CAPN8
POLR3F
EHMT1
DZANK1
GFPT1
CRYM
RCHY1
GORAB
RHOBTB2
TPCN1
AHSG
SYT5
EXD2
DIDO1
CYBC1
WASHC5
PRKAG2
NSMCE2
ISG20
PROSER1
NHLRC3
HLTF
KCNH7
HSF1
BOP1
AMBRA1
TXNRD1
CANT1
TBC1D15
FAM83A
SLC1A5
NME1
RAB15
CHD2
SPIN1
TAOK3
SUDS3
SFXN2
ARL3
MRPS23
USE1
ZHX1-C8orf76
ZHX1
STK4
GTF2H2
TUBG1
RETREG3
RGS9
NXNL2
RASAL1
SLC16A5
VPS37C
SLX4IP
RAC3
MKKS
CSTF1
AURKA
GPAA1
EXOSC4
TUBD1
RPS6KB1
NPDC1
ZBTB8OS
TUFT1
RBBP4
OSBPL7
TNRC18
CSRP1
PDE11A
KIF5C
GOLGA1
HDGFL3
POLR2J3
ZNF576
METTL2A
IRGQ
RUVBL1
ESCO1
ZNF398
TEX22
SPRED2
MX2
SLC13A2
EIF3D
RAB3D
OSER1
RNF223
PPM1A
GSN
CCDC9
ZNF2
LYRM1
DCUN1D3
SCIMP
SNRPD2
QPCTL
CCDC149
AP4E1
ANKS6
PNPLA7
MRPL41
EPN3
ZFHX2
THTPA
CTCF
VPS11
BPNT2
RNFT1
TSKU
AADAC
HELB
BANP
MISP3
NEUROD4
ACY1
NDUFB6
TRIM59
LINGO1
GSTP1
DHX40
USP31
TFIP11
MIER1
CCDC97
TEN1
HARS2
HARS1
ACOX1
NFKBIZ
IPO11
FTH1
UEVLD
TMTC3
CEP290
RAB7A
SUSD2
GTF2H2C_2
GTF2H2C
ANKRD13D
WDR55
SMIM6
GRHL2
COX16
TMEM205
CCDC159
ASB2
JUND
UMAD1
CAP2
TOB1
SLC51B
RMND1
DNLZ
ARMT1
CIB3
BCL2L13
FURIN
VPS33A
DSTN
BFSP1
RMDN2
PPM1E
PLEKHN1
ZNF44
EEF1AKNMT
GGCT
AHCYL1
PRKAB2
CHD1L
CALM1
CSNK1A1
YWHAZ
SEPTIN9
HYAL1
EIF4A2
EIF4B
CST1
EFHC1
UBALD1
GTF2A1
KIF21A
TMBIM6
TNFAIP1
IFT20
HHATL
GRHL1
ABCF3
MRPS30
PKP2
MAB21L4
GRPEL2
BICD2
VMAC
NDUFA11
CLK3
UBE2K
SULT1A4
SULT1A3
NUDCD3
BOLA2
LAD1
GJC3
SSBP2
MRPL33
UFL1
NTMT1
CD55
LPIN1
TSC22D1
TMEM107
PDE12
XKR7
GOLGB1
RTF2
RGL2
TJP2
PRSS41
KLHL12
ACOT7
GSTA4
LFNG
CEP128
ZNF277
SNAPC5
RPS27
RAB13
EPPK1
DOCK4
PRKCZ
NME6
USP4
CDK5RAP2
MKRN2OS
MKRN2
NMRAL1
HMOX2
UNC45A
RNF130
HDDC3
ANKRD17
ITGB4
ZNF564
SGO1
C16orf74
ATP5MPL
MFSD4B
RAET1L
FBXW2
EBAG9
AGR3
WDHD1
SOCS4
HERPUD1
CAPNS1
TVP23B
NPW
TDRD7
ZFP36
EEF2KMT
CTTN
GTF3A
DDX50
C3orf14
CALML5
RBM45
FAM222A
CKMT1A
RGMB
SCRIB
IPO4
SGO2
P4HB
DLGAP3
TAB3
GTSE1
SLC25A32
MACROH2A1
DCAF13
ARL2
CHRM4
BOLA2-SMG1P6
ADAM8
SRP72
MATN3
KRIT1
ANKIB1
TSC2
PTPN6
NTHL1
DCLRE1B
C12orf57
AP4B1
SNX1
FMN1
DCP2
CYSRT1
CIAO2A
EYA3
CDH26
SMNDC1
ZDHHC12
SLC44A2
CAPZB
AKIRIN2
COMMD1
CCT4
TMBIM4
LRCH4
FBXO24
DCLK2
TSNARE1
DIO1
CD63
KCNB1
SEC13
PRR15
CSF3R
ST20-MTHFS
SNAP25
HOMEZ
HM13
ALG13
ZNF367
SYVN1
SMIM35
RPS11
PIP5K1A
PCTP
H2BC4
H2AC6
GATAD2B
PPP1R3E
PALLD
BCL2L2-PABPN1
BCL2L2
SGK3
PARP2
MON2
CTSZ
TMEM94
LRRC6
CD82
TPH2
RNF24
PPP5D1
LMAN1L
LDB3
CALM3
C8orf76
TIPRL
LIN28A
HIBCH
RRBP1
MAZ
EPHX1
DDX46
FOXJ3
CCDC22
CACNA1F
UBR7
GON7
GAPVD1
RAC1
ARNT
SERPIND1
SASS6
C19orf67
SRFBP1
RABEP1
ALCAM
TNPO2
TMEM222
SEC24A
NTAN1
SYT7
SLC26A1
NR4A1
FAAP24
CEP89
LRRC46
SLC39A9
SIK1B
SIK1
ERH
TPRKB
SRI
GCN1
DNPEP
SERP1
PAH
IGSF5
EIF2A
SLC11A2
IMPA1
GPR107
PSMF1
OCEL1
NDUFA4
PPIL2
VPS29
RAD9B
HLF
EPO
SLCO4A1
SLC20A1
METTL9
MARCHF11
GABPB2
ANKRD2
SLC25A42
MYCL
UBL7
TET3
TBCC
EOLA1
BICRAL
MNX1
EFCAB10
SLC39A4
SLC39A3
ESYT3
DTX2
CPSF1
ZBTB42
YEATS4
B3GNT3
LRRFIP2
IST1
PKM
ABL1
ASIC3
ZNF165
EIF2D
ZBTB38
SMYD3
TBL3
STAT6
RNF151
POU5F1
MACROD1
ENSA
STYXL1
SPECC1
SLBP
RGS3
MDH2
GDAP1
AHRR
SLC35E2A
CASZ1
MCM7
AP4M1
CHFR
TMED2
CSRNP2
CLCC1
VEPH1