ChIP-Atlas: Target genes

Potential target genes for NKRF

Query protein: NKRF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3322833 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
NKRF's Target genes

◢ NKRF: Average

◣ SRX3322833: GM12878

◢ SRX3322834: GM12878

◢ SRX2423793: K-562

◢ SRX2423794: K-562

◢ SRX9739052: MDA-MB-231

◢ SRX9739054: MDA-MB-231

◢ SRX9739056: MDA-MB-231

◢ SRX9739058: MDA-MB-231

◢ NKRF: STRING

CCNG2
FAM72C
FAM72A
FBXO5
NPAS4
TICRR
FAM72D
FAM72B
NUF2
MTFR2
UBE2C
ESCO2
SKA3
MRPL57
SNRPD2
QPCTL
BRD9
TRIP13
KIF20A
BRD8
SGO1
DZIP3
CIP2A
BIRC5
RRM2
RAD54L
SHCBP1
CCNB2
RAD51
NEK2
MIS18A
PLK4
PRCP
DDIAS
CCNB1
ZNF331
CCNA2
CDC6
VPS35
PBK
AURKB
NUDT15
UTP20
FANCI
BLM
TRAIP
CDC25A
TROAP
POU2F1
SMC2
SKA1
STIL
NCAPH
SHC1
CKS1B
DLGAP5
GTSE1
CENPM
FANCD2
KIAA0895
ANLN
CKAP2L
XRCC2
CEP55
CRNKL1
CFAP61
EXO1
TRMT1
POLQ
FANCM
CCDC150
WDR62
THAP8
IQGAP3
NUDT2
KIF24
BUB1B
RECQL4
LRRC14
KIF18B
SGO2
NEMP1
MCM7
AP4M1
MCM10
CEP135
HMGB2
MKI67
ZFPL1
CDCA5
EDC3
HROB
FAM111A
ASF1B
MND1
CDKN2D
FBXO43
C16orf71
ANKS3
NEIL3
CENPS-CORT
CENPS
TEDC1
RFC3
TTC27
CDC20
ARHGAP11A-SCG5
ARHGAP11A
UNG
MAD2L1
TMED5
CCDC18
OIP5
NUSAP1
MCOLN1
DIAPH3
CHAF1A
NOL8
CENPP
CDC25C
ASPM
FAM200B
GGH
KIF15
KIAA1143
BRCA1
KLHL18
KIF9
KIF2C
FKBP1A
POC1A
DYRK1B
INTS7
DTL
VRK1
CDCA8
C1orf109
RABL2A
SMC4
IFT80
SPCS1
GLT8D1
ZAR1L
BRCA2
HMGB1
QTRT1
ZGRF1
LARP7
KIFC1
CDK1
TONSL
REXO5
ERI2
MAP3K7
CEP43
H3C2
MRPL27
EME1
RRP12
CENPE
KPNA2
SASS6
CENPW
PARPBP
NUP37
CLSPN
TTF2
PCNT
C21orf58
RPUSD1
CHTF18
MARCHF8
UTP25
SKA2
PRR11
SUMF1
DNAH7
DBF4B
SPC24
KNL1
ZNF688
TTK
UFD1
CDC45
PLK1
WASHC2A
FBXW9
DEPDC1
TRMT61A
ATAD5
KCTD9
CDCA2
TMEM129
TACC3
TRIM37
PPIL3
NIF3L1
EFCAB11
MYBL2
KIF11
PDZD11
KIF4A
AGFG2
CSTF1
AURKA
PPIL4
SMYD5
KIF1C
INCA1
RABL2B
E2F1
ECSIT
CENPF
TIMELESS
METTL1
EEF1AKMT3
TIGD2
RBM19
RNASEH2A
HJURP
DIP2A
RAD51AP1
C12orf4
PPIH
GRWD1
FAM83D
H3C15
H3C14
DOLPP1
BCAS3
PEX19
CALR
PKMYT1
DYNC2I1
POLR2J3
SP4
RAD18
TIAL1
E2F3
CENPH
NET1
BLOC1S1
ATAD2
CISD1
IPMK
CENPN
METAP1D
DERL3
HASPIN
ACTR6
C2orf69
ZNF888
CCT2
CEP128
WDR90
HEXA
RNF40
CCDC189
PRPF38A
ORC1
VPS33A
IPO4
NDC80
METTL4
RCCD1
METTL15
KIF18A
NEURL2
CTSA
ZSWIM9
LIG1
FRAT2
C19orf48
CDIN1
SPNS1
DNA2
CDK7
KAT5
REEP6
PCSK4
THOC3
LIN9
FDX2
INAFM2
RMI2
REEP4
HAGH
FAHD1
FAM24B
NUP107
WDR4
PMS2
AIMP2
DSCC1
HECTD3
ESPL1
MSH3
DHFR
MFSD1
INKA2
DDX20
CKS2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
ZNF778
RAD9A
RANGAP1
TPX2
EBNA1BP2
CFAP57
SF3A1
CCDC157
PXMP2
POLE
SHQ1
PIAS1
TAF13
FAM76A
GCDH
DDX21
AUNIP
SUV39H1
ATP6V0D1
RRS1
RRP15
TEDC2
CEP162
HSP90AB1
IREB2
ETFDH
C4orf46
MIS18BP1
CDC23
H3C7
H2BC9
WASHC2C
WDR81
PDSS1
TCF19
CCHCR1
NAA25
TRAPPC6A
BLOC1S3
COMMD9
C5orf34
FRAT1
MELK
ENDOV
PRKAR1B
NFKBID
DYNLL1
PCOTH
MIPEP
COP1
RTTN
GPATCH3
MOK
FNTB
AAAS
MYO9B
HAUS8
CCDC86
RSRC1
C16orf46
AARS2
NEK10
NLE1
NDUFAF6
CCNE2
VARS1
NEK4
KCNAB2
AEN
MMUT
CENPQ
SLF1
KIAA0825
ZNF785
POC5
SUV39H2
ZNF367
IDUA
ZNF724
PSME3
WDR74
H3C8
TSR3
GNPTG
DPH1
ZNF497
MZF1
PEPD
LIN54
SLC25A26
MED30
URB2
TAF5L
FIGNL1
NDUFA2
IK
SCFD2
INPP5K
ZNF701
ACOX3
TRIP12
FBXO36
TFB2M
CNST
SLC25A10
MOSPD2
FANCB
FANCF
ALKBH8
IQCE
CPEB4
TMEM231
ZNF594
HGS
ARL16
CCDC146
H3C3
RNF166
CTU2
TOM1
GPATCH4
SPDYE14
SPDYE10P
CASTOR2
LENG1
DUT
DNAJC9
PPP1R16A
RER1
MORN1
RAD54B
PCNA
KIF22
WDR46
PFDN6
SMC6
GEN1
TRIP4
FBXO25
TRMO
RPS29
TAF4B
NAP1L4
TPRA1
LRR1
RCC1
COMMD4
PUM3
NOL6
SLC43A2
SMC1A
RIBC1
ATG14
VPS11
CDCA3
COX14
IQCH
AAGAB
CDC37
NBR1
BNIP3L
ZNF107
DCLRE1B
AP4B1
MED25
LTV1
PACRGL
CNNM2
CARS1
NOLC1
WIPI1
GLRX5
CFAP54
UBXN11
KIF23
GINS4
THADA
CFAP298-TCP10L
CFAP298
MON1A
MAEA
PRC1
TFIP11
HSPA9
IQCG
LMLN
POMT2
GSTZ1
POLR3D
SECISBP2
FARSB
DHX37
NAGPA
RPUSD4
FAM118B
OGDH
FAM161B
COQ6
SNIP1
RPAIN
NUP88
DPH2
KATNBL1
ADPRS
WDR36
RECQL
GOLT1B
LOC101928764
CFAP43
CENPA
PNPT1
TOM1L2
DRC3
ZNF92
FBXL20
FAM174A
PSMC3IP
DEPDC1B
PPIL1
ZFYVE1
NCLN
TRMT6
MCM8
GINS1
STOML2
NOP16
HIGD2A
COG7
QTRT2
CCDC191
TCTN1
C17orf97
SPAG1
UBFD1
EARS2
RCL1
MRE11
ANKRD49
GDAP1
KIF14
FANCC
EFCAB6
TWNK
MRPL43
LYRM4
FARS2
NUP35
ZBTB49
LYAR
RNMT
FAM210A
ADCK1
TAF5
IKBIP
APAF1
RNASEH2B
ATR
RUVBL1
PPWD1
CENPK
URB1
PPRC1
SFXN2
ARL3
TMEM258
FEN1
WFDC3
DNTTIP1
LRRC29
PCNP
BIN3
PITHD1
TDG
HCFC2
GLT8D2
MIER1
DNAI4
DHX33
UBN2
CMSS1
LAMP1
TMEM186
PMM2
DDX42
CCDC47
MRPL3
FPGS
C20orf96
RPL6
PTPN11
SLC49A4
HSPBAP1
ZNF273
ZNF519
KAT2B
H2AX
CEP295
MCM5
STK11IP
ANKRD54
OSCP1
SPDL1
AP5Z1
GMNN
SPACA9
AK8
C10orf143
ING5
DDX49
COPE
NUDT1
MRM2
CYB5R4
TOP2A
ERI1
WEE1
HTR5A
NSUN6
ROPN1L
NR1H2
NEU1
INTS12
GSTCD
E2F8
MYBBP1A
NCL
PIMREG
ATP6V1H
ZWINT
YBX1
DCK
PHB2
SLC39A6
ELP2
PABPC1
FAM174C
BUB1
MRM1
SETD4
GBA
IPO11
TMEM192
TMED8
SAMD15
ZWILCH
RPL4
TXNDC17
KIAA0753
PNO1
SPEF1
DHDDS
LSG1
DDX10
RPLP0
GABARAP
TK1
AFMID
NXF1
QSOX2
SYCE2
CFAP410
RHEBL1
FOXJ1
TIMM21
FBXO15
LDHA
GATB
SPC25
FZR1
UFSP2
BBS1
DUS3L
LRRC59
PROSER3
TP53INP1
IMP4
CCDC115
SERTAD3
VPS26B
NCAPD3
ELAC2
GLE1
CLPB
MCM3
PCLAF
TIMM44
FAAP24
CEP89
CRK
SUPV3L1
CYB561D1
YIF1A
CDKN2AIPNL
TRMT5
SLC38A6
UBL7
ZNF473
VRK3
DUSP18
NME7
BLZF1
CHEK1
CDK11B
CDK11A
PPID
HSPBP1
THBS3
MTX1
ANAPC7
RBKS
BABAM2
NARS2
SLC7A5
ATG101
VPS50
HEPACAM2
RFK
LARS2
YWHAG
TXNL4A
RBFA
RARS2
ORC3
TSC1
GFI1B
NOTCH2NLC
POLN
HAUS3
NOTCH2
C1orf159
PEMT
C12orf45
STK32C
LRRC27
SH3BGR
LCA5L
MIS12
DERL2
ZNF593
C1orf232
RACGAP1
UNKL
INTS8
DAZAP2
METTL18
C1orf112
PIGO
GTF3C4
DDX31
TOMM22
ADSL
CIT
RPSA
ZNF680
RPS27L
TMEM120B
BRMS1
ZNF557
OSGEP
APEX1
AXDND1
CCDC77
RPIA
MVK
PRCC
PISD
HAT1
IFT57
TACO1
SYNJ1
SLC36A1
HSPH1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
IFT88
PDF
MED20
BYSL
C5orf51
SRPRB
PRKDC
MCM4
ATG16L1
MDM1
KLHL12
TCTN3
DNAJA3
NOP56
KLF16
NHP2
MAK16
KLHDC4
SPATA5
NUDT6
TUSC2
ASPSCR1
TOMM40
PAK1IP1
C6orf52
HACL1
BTD
RBL2
UBE2S
HBP1
LOC100287896
LIPT2
TTLL11
RFC5
TTF1
MRPS2
C9orf116
SLC25A6
DDX19B
AARS1
CSE1L
CLUAP1
NUDCD2
HMMR
TNFAIP1
IFT20
MNS1
PWP2
LOC102724159
FSIP1
ZNF718
GTF2B
LARP4
MTHFR
CLCN6
RHBDD2
CFAP69
HMBS
RAB28
RUNDC3B
GFM1
SPATA33
GALK2
COPS2
DYNC2LI1
DARS2
CENPL
COQ10A
TTLL5
ERG28
IFRD1
DOP1A
PIF1
ATIC
MXD3
RRP9
PARP3
TOP1
MRPS16
RPS13
TTLL4
TOGARAM1
KLHL28
C12orf75
CCDC91
HAUS6
ZNF513
RMC1
RBL1
SLC12A9
COQ8A
ZNF430
ISCA1
USP2
SNRPE
MARS2
FIS1
FOSB
MYDGF
PPP1R37
NEK11
ASTE1
PBRM1
GNL3
ZNF507
HEATR1
RTEL1
TCTN2
TNRC6A
G2E3
SPG21
PNKP
ZNF324
CYC1
LETM1
EIF2S2
SIRT3
PSMD13
GPN3
FAM216A
NUDCD1
LCLAT1
TSPAN10
NPLOC4
TIMM23
DIMT1
WDR61
ETF1
NDUFB3
FAM126B
RNF220
PEBP1
BICD2
EXOSC5
BCKDHA
TPRKB
FAM222A
SPICE1
EEF2
NUP214
TTC16
PTRH1
IARS1
SNX15
POLE3
C9orf43
SART1
HSF1
BOP1
TBC1D31
DHODH
CDK5RAP3
TMEM222
ITGB3BP
EFCAB7
PIH1D2
NKAPD1
STK19
DXO
TMX2
MED19
NOM1
PPP2R3B
SPPL2A
MYBL1
TADA2B
CCDC96
VPS18
WDHD1
SOCS4
ING2
NAGLU
CREBRF
SMARCC1
CAAP1
MALT1
TAX1BP1
SPAG16
NAT10
CELSR3
ARHGEF39
YEATS4
MTR
CCDC34
HEATR5B
GPATCH11
ZNF93
ZBTB9
POLR1B
SLC35E1
NAA38
CYB5D1
RPP40
TIMM23B
PARG
OXNAD1
DPH3
GUSB
STK36
RNF25
EXOSC6
DCXR
EXD1
CHP1
C1QBP
BBS5
RSL1D1
SPATA4
POLR3E
AHI1
CCDC113
DNAJC25-GNG10
DNAJC25
LETMD1
EFTUD2
CCDC103
SPOUT1
EFHC1