ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3450331 | JMSU1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◢ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◣ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

LPCAT3
TNPO3
VGLL4
SLC25A20
TAGLN2
ANAPC15
COTL1
DLG4
ACADVL
S100A2
CRY1
ETFDH
C4orf46
SIRT5
PDE12
RRN3
CDK11B
CDK11A
ABHD6
NDUFS7
ACACA
MLYCD
CLCF1
DHRS3
SREBF1
CAT
AXL
ECH1
RXRA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ACAA2
FASN
TBP
PSMB1
TBL1XR1
WDR74
LY6K
UPF2
KCNMA1
AMOTL2
PLEC
OTUD7B
ETFA
COQ5
RNF207
UROS
BCCIP
SLC50A1
PTX3
NOL7
DENND4B
AKR1C2
RIPK1
ZBTB37
KMT2A
MMP19
GMPPA
SH3BP4
HSDL2
FLOT1
TMEM139
C16orf95
ESRRA
STT3B
DBI
C2orf76
SPRED2
ROCK2
TFAP2A
USP49
PTPN4
NIBAN2
CCDC88A
OSMR
BRF2
GBA
TMEM230
FAM227B
DTWD1
SYDE2
NR2C2
KRT80
RARB
PPP1R15B
CRABP2
HSD17B4
GPR39
AJUBA
ATXN2
NFKBIA
PEX19
GRHL3
ACSL3
TAF9
RAD17
AK6
AURKAIP1
PSAP
GPRC5A
MTRNR2L2
OARD1
NFYA
H4C14
SLC25A1
MACROH2A1
TMEM53
ARMH1
MAP2K3
ENO3
MYL12B
SCARB1
PRELID3B
SCOC
PHYH
ITGB2
H3C15
H3C14
KAT6A
GCN1
SERTAD2
WDFY2
TSPAN4
SPAAR
ACADS
LMNA
HIC2
ISCA1
USP32
KANSL3
H4C15
E2F3
ASB1
SULT1C2
CARHSP1
VIM
SDCBP2
SRCAP
LOC730183
SIRT6
ANKRD24
DCAF10
LONRF3
FSCN1
NOTCH2
NEURL2
CTSA
BRCA1
MXRA8
DOT1L
NUF2
B4GALT7
RGPD8
RGPD5
SCD
HIVEP1
SMAD7
PARP4
NUDT4B
NUDT4
FRA10AC1
AHNAK
ERLIN2
MTRNR2L8
IBTK
AGXT2
SRD5A3
PDCD1LG2
IFRD1
TRMT2A
RANBP1
KLF11
EIF4E
RPS3A
PLD1
RCOR3
OXSR1
DZIP3
CIP2A
TBC1D7-LOC100130357
TBC1D7
UPRT
ABCB7
FAM98B
TRAPPC3
LAMP1
ZNF746
DNAJC11
AP1M1
SPEF2
PTPRS
STX18
CEP70
TPRA1
KLLN
KEAP1
STK10
PLPBP
RNF168
SKIL
PUS10
PEX13
PLEKHA2
SMAD3
SMG5
BOLA3
MDM2
NOLC1
COMMD2
GPR137
SYNPO
SCAF1
RBAK-RBAKDN
RBAK
NANP
MAF1
TNFRSF12A
PLIN2
MICALL1
ANK1
MTF2
DPY19L4
COPS7B
IL4I1
PAFAH2
SLC9A8
FAM207A
ZGPAT
ARFRP1
S100A16
PPP1R12B
MRPL3
DICER1
CPA4
ABHD15
TP53I13
FRG1
CDKN2A
ARL14EPL
RNFT1
ZNF76
ARHGEF11
RANBP9
TCTEX1D4
BTBD19
LETMD1
ZBTB40
SCAP
MFAP3L
UPF3A
PLEKHG4
NKIRAS1
NR1D2
ACYP1
ZC2HC1C
SLC39A3
TMEM182
MSL2
NUP153
PCCA
LEKR1
SUN2
ZNF846
RIN1
GPAT3
MRPL34
ACTR3
RAD54L2
TEF
CLTC
TANK
OGFOD2
TATDN3
NSL1
ZNF384
MCUR1
CFLAR
ECI1
PCID2
CUL4A
MAP3K7CL
HINT3
ZC3H6
KLF7
UBR4
SPIN1
RPS19
ERCC1
HERC5
NMNAT1
LZIC
DENND6A
RGPD2
RGPD1
CHD1L
PRKAB2
DAGLB
KIRREL1
TMEM222
ZFP57
PRR7
CD63
MMD
RBL1
GFI1B
TSC1
NAA50
ATP6V1A
SF3A3
GSN
H4C12
ARIH2
H4C8
GABPA
ATP5PF
CREBL2
HERC1
INTS1
KCNIP3
MTRNR2L9
PRKAG2
PTEN
TEFM
GSDMD
MCL1
RRNAD1
ISG20L2
ETFB
RBM15
MRPL4
STK11
FOXJ3
SSBP2
GNE
GFER
REXO4
TMED5
CCDC18
SLC25A46
STX16
RBBP5
CYP4V2
PARL
NTN4
FZD5
EIF2AK1
DENND3
C16orf72
LPIN1
MELTF
CD83
ABCA1
SUPT5H
RCAN1
OBI1
KANK2
CAV1
NFE2L2
POLD3
PDE4DIP
HNRNPF
WASHC2A
RPL37
TXNDC11
SLC25A45
MOB3A
IZUMO4
PTMA
TRIP12
FBXO36
HMGA1
TRABD2A
DMAP1
YARS1
S100PBP
ATP5MC2
MED23
YTHDF2
CPSF1
CCDC57
AMDHD2
CCNL1
LNPEP
ITGB3BP
EFCAB7
SLC33A1
PAK1
ADGRA2
RNF145
ATR
ENO1
HRH1
SDC3
TARS2
RABGGTA
STK17B
ABHD2
SLC20A1
CAMSAP2
ZBTB38
PPP1CC
FLNC
SLC45A4
RBMS1
H4C4
RBSN
DAW1
HOMER3
GABPB2
RNF220
CTNNA1
SOCS7
EPM2A
SCNM1
LYSMD1
ALKBH3
ALDOA
LIMA1
S100A6
AKIRIN1
PHF19
UHMK1
ZBTB45
RBM28
BRD2
BRWD1
SMARCAD1
NSFL1C
DDHD2
DUS1L
TBCEL-TECTA
TBCEL
NOXA1
ARHGEF12
KIAA0232
IGFN1
HSPE1-MOB4
HSPE1
HSPD1
ZDHHC3
EXOSC7
EP400
ZNF341
TMEM68
TGS1
DUSP23
KIF3B
C3orf62
GLUD1
JMJD1C
UBE2Q1
ZNF239
SHLD2
GBE1
LGALS1
ZFAT
MTOR
ACADM
RDH5
SEC13
HMCES
ESRRG
RAB11FIP5
KAT6B
TMEM184A
EXD1
CHP1
KCNE1
PEX14
ZNF839
MLLT11
CDC42SE1
ELOVL6
DCP1A
MFSD3
PFN2
POGZ
OPA1
UBC
CEP192
PLEKHM3
THEM4
RBM17
SLC25A4
FGFRL1
DEK
ZER1
YES1
CDK5RAP1
RPS7
NDST1
NFAT5
ANGEL1
ANKRD33B
SLC25A34
ST3GAL3
UQCRC1
ATP5MC3
UBR5
SKIV2L
NELFE
C6orf89
WDR25
WARS1
DONSON
TACO1
CCN2
NBPF15
SESN1
CEP57L1
RBKS
BABAM2
PIM1
DSTYK
WDR36
VPS13D
TAB1
MYL12A
ATXN1
C1RL
RBM7
C11orf71
PLS1
ITGBL1
NR2C1
INTS12
GSTCD
TOB2
TBC1D19
ZNF687
RARA
CDK12
ID1
SEH1L
SLC35A3
FAF1
MC1R
KMT2D
CUL1
RNPS1
RAC3
DCLRE1B
AP4B1
USP37
CNOT9
CTF1
SNX24
DBNDD2
RRAS
GGT7
VOPP1
ARHGAP29
ACSF3
KMT5B
MLLT1
PEX3
ADAT2
SBF2
ZC3H7A
BRPF1
TECPR1
TTI1
RPRD1B
MRPL44
CALM2
GEMIN7
HOXC10
SSX2IP
NUP107
LRP6
RARS2
ORC3
PRMT9
AGPS
DPH5
UCN2
PTP4A2
ITGB1
HNRNPR
RPL27
H4C5
GTF3C5
CENPH
MAD1L1
KCTD18
ALG5
KLF16
PANK2
EDC4
RUVBL1
PXT1
KCTD20
CDKAL1
EEFSEC
POLRMT
EPB41
TMEM186
PMM2
AP1B1
DTNBP1
SSU72
GTF2H2C_2
GTF2H2C
MTHFR
ATPAF1
CLCN6
FAM8A1
GPR156
WASHC2C
PITPNM1
BMS1
JRK
AK3
NABP1
MAPRE1
ADPRHL1
AADAT
NME1
DPP9
DCP1B
SORBS3
LARS2
GDI1
BNIP1
MRO
NCEH1
CRCP
TMEM37
SMYD2
TRIB1
PGM1
NCOA4
FAN1
CPLX2
DEDD
CCT5
ATPSCKMT
CAP2
THAP3
NDUFS3
KBTBD4
EIF3F
TYMSOS
TYMS
ROPN1B
WDR24
ZFR
PRKCQ
SH3D19
NDUFC2-KCTD14
NDUFC2
PARVA
DNAJB2
RRAGC
ASXL3
TEX12
PIEZO1
COL6A2
TMEM41B
CTNNB1
TOMM40
C12orf73
LIMS1
ATXN7
GATAD2B
HMGN2
CCDC106
IST1
IPO4
MICOS10-NBL1
MICOS10
RTTN
ASH1L
HNRNPA3
DOCK7
C2orf49
ATP5MPL
ZNF564
DTNB
MARCHF8
SUCLG2
HERC4
CSF2
PPP5D1
CALM3
PPP2R5B
CTSC
NT5E
AVPI1
DST
THEM6
FOXK2
USP42
MRPL58
DIPK1A
AFG3L2
SH3TC2
AIFM2
CHCHD1
MRPS15
GGCX
PDE4C
VEZF1
SYNJ2
ISY1-RAB43
ISY1
IER3
SMARCD2
GREB1L
TIMM23B
PARG
ARL8B
SUPT7L
SLC4A1AP
E2F7
MAP10
SNX25
ZMIZ1
SAMD11
SAR1B
LTBR
BRIX1
PSMF1
STK40
DUSP12
NAPG
FAM234A
CLTCL1
UNKL
RFFL
NR1H3
ZNF292
KDM3A
MTIF2
GTF2H4
WDFY1
HSPA6
C1orf174
IGF2R
EIF5A2
NDUFV2
UBE3B
KCTD10
GNAL
TCF3
IMPDH1
EXOSC4
IMPA1
SLC39A7
RXRB
SYT7
UBE2R2
PLAAT3
RHBDD3
EWSR1
SELENOT
DHCR24
TBC1D9
HEMK1
HACD1
ADAMTS12
EZH2
IRS2
SMIM12
CC2D1B
SRXN1
RUFY1
TRAPPC10
KAZALD1
PSMG3
BACH1
ZBTB20
ARID1A
CLASP1
SLC25A51
CCDC186
ERMARD
PLSCR1
COL7A1
KPNA7
SEC23A
PICALM
RNASEH1
PEF1
TBC1D5
MUL1
EIF4EBP1
CLOCK
KPNA1
OXA1L
HRCT1
SERP1
EIF2A
TIMM44
MTMR4
H3-3A
ATP2A2
CLCN3
TMEM242
EBAG9
SEC24C
SETD9
ZNF696
GPR160
H2BC10
RREB1
MSLN
TMEM259
U2SURP
BAZ1B
WDR7
IMPA2
CLK1
MKRN2
NFX1
MIEN1
RAI14
KCTD9
CDCA2
EMP3
UAP1
NBPF1
PDS5A
YEATS4
TMEM41A
HPS3
ZNF214
NLRP14
SDHC
FGF1
PKD2L2
JOSD1
MRPL21
IGHMBP2
ARID5B
BMPR1A
TTC26
EPHA2
SFSWAP
ZNF532
SHC1
FBXO31
CKS1B
MAP1LC3B
ZDHHC5
ADRM1
PARP9
DTX3L
ZBTB8OS
RBBP4
ARMC8
DUSP1
HENMT1
SLC25A35
DDX5
CEP95
CGGBP1
C3orf38
NCBP2AS2
NCBP2
CD55
PRRC2B
KLF12
CAPN1
TM7SF3
SCAND1
DENND5B
PRELID3A
SLC39A13
CDC42EP4
MTMR10
FOS
KCNJ4
ARHGAP22
MRPL30
MITD1
COQ8B
PSMD6
UNK
IDI1
CDKL3
UBE2B
PPP3CB
YBEY
MCM3AP
WDR37
CENPM
ME3
YWHAH
SLC35D1
CAPS2
CWC25
CCN5
ATP5F1E
TDP2
ACOT13
ANXA5
PCBP1
ETHE1
MCAT
PLEKHA6
HUS1
MDC1
MTERF4
SIK3
TXLNA
TBC1D1
DHRS13
ZNF12
SOCS5
MANBAL
ANAPC5
COQ7
EIF5A
ANXA7
TSPAN10
NPLOC4
ZBTB17
PSMD1
MYBL1
DNLZ
HES4
INF2
IRF2BPL
CFAP20
ATXN3
TNFAIP8
VPS72
PPP1R13B
MYLK
ZNF639
RUSC1
PLEKHG2
UBE2E2
H4C11
ZSWIM1
MAIP1
GOPC
CYREN
PCYT1A
ABHD12
SNAP47
JMJD4
UQCC3
LBHD1
ANKRD1
ERN1
ATXN7L2
S1PR1
INO80D
COL4A2
COL4A1
VSIR
RRP15
MRS2
GATAD2A
FANCD2
WHAMM
INSR
SLC35G2
MSH2
NXPH2
CCDC174
POLDIP3
ATP1B1
ZMPSTE24
MRPL39
PRDX1
AGK
TBC1D13
ENTPD5
BBOF1
RAB12
PRELID2
RNF6
RNF213
KIF13A
NOL12
HSPA8
GATD3B
GATD3A
ZNF740
CSAD
MBNL1
KBTBD7
RGPD6
TIMM23
MAML3
PRPSAP1
NDUFB1
CPSF2
ATRN
TADA3
ARPC4-TTLL3
ARPC4
EPHA5
ASAP1
YEATS2
DUSP8