ChIP-Atlas: Target genes

Potential target genes for PRPF4

Query protein: PRPF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708080 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PRPF4's Target genes

◢ PRPF4: Average

◢ SRX10976818: Hep G2

◢ SRX10976819: Hep G2

◢ SRX4708032: Hep G2

◢ SRX10976790: K-562

◢ SRX10976791: K-562

◣ SRX4708080: K-562

◢ PRPF4: STRING

H2BC12
H2AC12
H4C11
H4C12
H2BC11
H2AC11
PRDX1
H2BC17
H2AC17
H3C2
ZFAND6
H2BC21
H2AC21
H2AC20
EEF1A1
H1-4
TESMIN
SRSF6
HERPUD1
SRSF7
H3C4
H2BC7
H2AC7
EIF1
RCOR3
UBE2S
SRSF2
MFSD11
H1-2
RPS12
H4C14
H2AX
FUS
ATF4
RAD23B
FAM53C
CDC25C
UBC
NAA38
CHD3
MDM4
OAZ1
HSP90AB1
ACTB
NXF1
CALR
SLC9A1
RPLP0
BRD2
DDX3X
PPIA
H4C15
C19orf48
MAT2A
H3-3B
MTHFD2
CIRBP
H2BC15
H2AC15
DDX5
DDX19B
AARS1
ADARB1
H2AC19
H2AC18
H3C15
H3C14
RPS2
BRWD1
NPM1
H2AC4
MCL1
GTF2IRD2
P4HA1
RPSA
HNRNPA3
FOSL1
HSPA5
WDR74
TUBB4B
GLUL
TRA2B
H3C13
H2BC18
H2BC8
H2AC8
RPL3
HSPA1B
RPS20
RPS9
SESN2
E2F3
CEP95
FTL
H2BC14
H2AC14
HNRNPAB
RPLP1
DUSP1
HSPA9
IER5
RRM2
HSP90AA1
MORF4L1
RHEB
ATF3
ACTG1
SCAF8
HNRNPH1
MTRNR2L2
MARCHF7
NASP
UBE2L3
MTA3
TUBA1B
OGA
TOB1
ASNS
DDIT4
FBXL20
JUNB
EIF4A1
H2BC13
H2AC13
YDJC
CCNL1
H2BU1
H2AW
UBR5
TOP3B
CHAC1
H2BC4
H2AC6
CTNNB1
JPT1
TRIB3
CYCS
RPS23
ATP6AP1L
FTH1
NRF1
FOS
C12orf57
SRRM2
HNRNPA2B1
CBX3
CSRNP2
SKP1
NUP214
RPS3
HMGA1
SLC3A2
PIP4P2
RPL13
PABPC1
CALM2
MYLIP
TRMT2A
RANBP1
EGR1
DNAJA1
APTX
GTF2IRD2B
ENO1
TFRC
SCARB1
TBL3
CEBPB
GARS1
PRAME
TAF1D
C11orf54
MPC2
DCAF6
EIF4A2
ZBTB2
CSKMT
C11orf98
RPL12
LRSAM1
MRPL40
HIRA
MTRNR2L9
ZNF143
EHD1
EIF3J
RPS16
MTRNR2L8
TMSB4X
TUBA1C
STMP1
NCOA7
NABP1
DGCR8
RCC1
FAM83D
RPL10A
BZW2
ANKMY2
LDHA
BAIAP2
ARL6IP1
POLR2J3
H3-2
DDX21
PHF13
ANGEL1
DR1
SLC38A2
MATR3
H2AC16
TAF15
SLC1A5
H4C3
FSCN1
KLF6
NCL
MEMO1
AFF1
SLC16A1
HMGN2
ZC3H11A
RPL23A
KMT2E
ENOSF1
PLEKHG2
RFWD3
HNRNPDL
ENOPH1
PCBP2
PPP1R10
MRPS18B
SETD5
CD55
AP5B1
H2AZ1
BAG3
KPNA2
PRKAG1
RPL13A
GATAD2B
SLC20A1
CKS2
SRSF10
NUCKS1
CSDE1
CFL1
PCK2
NRL
RPL35
ARPC5L
H4C5
MED15
SFPQ
ODC1
CA8
PAFAH1B2
NFYC
LZTR1
ZBTB4
POLR2A
KDM3B
GTF2A1
CITED2
SUB1
YBX1
H3C10
SOD1
RPS8
GAPDH
BCR
SPDYC
HBP1
EIF5A
RPS5
UBE2D3
RPL36
H1-10
GHITM
XPOT
CSE1L
NDUFS7
NOC4L
DDX51
ATF1
TMEM267
SLC39A10
STMN1
UAP1
NFE2L2
RPL5
RSAD1
H4C9
RBM39
BCLAF1
EEF2
HSPA8
YWHAG
NBEAL2
LRPPRC
SRSF1
KCNK5
MYL12A
BCL2L13
DDX59
TNFSF9
MPP5
SRSF5
VCL
CLPB
PCBP1
MADD
SNRPG
ARL15
DNAJB1
NOTCH2NLC
SLC35E2A
NOTCH2NLB
NOTCH2NLA
WDR4
GADD45A
GTPBP4
TMPO
MAPK1IP1L
RPS3A
CANX
CDK11B
CDK11A
PBLD
HNRNPH3
SNAP29
PI4KA
TAF9
RAD17
AK6
RPL15
NKIRAS1
ACTR3
PPIF
WDR1
LRCH4
FBXO24
WASL
TENT5C
PPP4R2
NUFIP2
RMI1
HNRNPK
ZNF740
CSAD
ZFAT
PEX5
C12orf65
COMT
TUBB2A
EIF4G2
XBP1
ANO10
ABHD5
SERTAD3
SREK1
VAPA
UBR4
DMTF1
LSM8
ILF3
SF1
NOP56
ID2
HMGB2
LUC7L2
RPS13
SIRT4
RPL18A
HNRNPL
ZCWPW1
MEPCE
BAG6
APOM
CTSC
ETF1
GTF2I
PSAT1
YTHDF2
SUPT3H
EIF4E
RPL38
SRSF3
TMEM41A
TBC1D22A
HNRNPD
NOTCH2
RPL8
TBL1XR1
SLC35E2B
EIF5
TRIAP1
MCM7
AP4M1
MAP1LC3B
FBXO31
IPO7
EIF2D
TRIM25
SH2B3
DHRS13
LRRC37A3
DRAP1
C11orf68
LTA4H
TRIM28
RRP1
BRD3OS
POLR3D
MXD1
MCOLN1
DNAJB4
PSMG2
CEP76
CALM1
FAM3C
ZNF76
STT3B
NACC1
RPLP2
GORASP2
TPT1
ACBD6
TBRG4
H2BS1
SMAD5
TIGD5
EEF1D
TPI1
CENPC
ID1
HEXIM2
PNP
SDCBP
POLR2J2
HIC2
SMC1A
RIBC1
DNAJB12
HNRNPR
NRDC
ICE2
TOB2
VARS2
RPL14
UCHL5
RO60
HINT1
H3-3A
VEGFA
SSU72
TMEM68
TGS1
CZIB
PTP4A1
LMNB1
ZNF274
EIF2S2
TAF4B
YWHAZ
MRPS14
AHCTF1
VPS52
RPS18
H4C1
SDF2L1
PCF11
GTF2H2
ACTR3B
DEDD
UBA52
LRRC59
PCIF1
ATF7IP2
SBNO1
TYMSOS
TYMS
WDR25
WARS1
ZFAND5
SPATC1L
AK2
NCOA3
STYXL1
MDH2
NIBAN1
MARS1
ARHGAP9
ATP5F1B
CDC42
PTPN9
CAPRIN1
ZC3H6
DHX9
IFRD1
NUP62
IL4I1
ATF5
SPHK2
RPL18
UIMC1
ZNF655
TP53BP2
PSMG1
IGF2BP3
MORC3
TEAD2
EIF4B
ZNF367
ESYT2
RPL17-C18orf32
RPL17
RPL32
FBXO5
GMEB2
BAZ1B
H3C7
SNX5
MGME1
CRKL
RBM12
CPNE1
THUMPD3
TARDBP
MKNK2
CRCP
VMAC
NDUFA11
IARS1
GTF2H2C_2
GTF2H2C
RPL28
LSM14A
TRIM27
IQSEC3
YARS1
S100PBP
C5orf24
SP3
RBM17
FHL2
HNRNPF
ANP32B
RNPS1
DCAF10
ERMARD
EFCAB2
PAIP2
LSR
SERPINB9
DHX15
SLC25A1
TRAF7
RPL19
GLS
NMNAT1
LZIC
RUNX1
SEC63
RNF11
ZBTB40
SLC25A3
RBM15
SFT2D3
ZNF460
THAP5
DNAJB9
MAPK1
TUBB
ZNF24
PPP1CC
FMC1-LUC7L2
FMC1
ALDOA
TNPO1
MKRN2
PPP1R14B
SRD5A1
NSUN2
PSMD5
DDX17
CCNI
ATAD2
PHF19
SERBP1
FNTA
FBXO4
CCPG1
C15orf65
MICOS10-NBL1
MICOS10
IER5L
GMPS
TOMM6
H3C12
NUTF2
CENPT
LANCL2
SSNA1
ANAPC2
SMG5
PTMA
RTN4
SAR1B
FUCA2
THAP7
NGLY1
PRRC2A
DEK
GTF2B
BRAF
RBMXL1
KYAT3
SRSF11
SDE2
TM2D3
GOLPH3
TSEN54
CASKIN2
CTCFL
IMMT
C16orf72
CSRNP1
REPS1
ZNF124
MIF4GD
SNAI1
ZNF3
JUP
SLC25A5
ZCCHC7
RPL22
CCN1
PRRC2B
MAN2C1
PRMT1
PMAIP1
RPL10
CAMTA1
BPTF
USP14
FAM8A1
UBXN8
ZNF621
LONP1
CATSPERD
UBAP2
NQO1
USP42
PRPF40A
ARL6IP6
ADK
ASH2L
SOD2
SERP1
EIF2A
ANKRD17
BTG3
HLCS
COIL
NUP153
MYC
HSP90B1
CARS1
GDF15
SARAF
CREM
KAT6A
RBM25
METAP2
EIF1B
BCAT1
RPS14
RPS10-NUDT3
RPS10
NOP58
BCAP29
FAM222A
VDAC2
GGNBP2
HLTF
RPL11
STARD7
PDIA3
DPY19L4
OR1F1
MRTO4
EMC1
ING1
HOXB9
ARID1A
RPS15A
ZNF425
ZNF398
SREBF1
TMEM60
PHTF2
RFX3
SNRPD1
TADA3
ARPC4-TTLL3
ARPC4
USP47
THRAP3
GTF2H3
EIF2B1
RPL27A
MRPL48
CLIC4
DNMT1
JADE1
ANXA2
TMSB10
ZNF787
ZNF786
NANS
RCC2
TPR
ODR4
IMPDH2
SND1
RPS28
NDUFA7
UBA2
JUND
ZCCHC8
ADGRL1
PABPC4
POLG
F2RL3
INPPL1
IBA57
EZH2
PSMD12
SLC25A36
HCFC1
MTHFD1L
ADNP
NFIC
CCNB2
MTF2
PPIL2
POLR2J
SNX1
PCBD2
MTHFS
CDKN1C
RAD23A
RAC1
DGAT1
HSPB1
RNF19B
UBE2Z
KATNA1
KIF21A
DARS1
ACVR2B
CD164
ZNF518A
UCK2
PUM2
GDI2
PSMA5
RPS24
SLC7A5
DDX39A
PPP1R15A
AZIN1
ECI1
CCDC50
EIF4A3
C16orf95
VOPP1
RAPGEF1
KIF15
KIAA1143
SLC7A1
UTS2B
MTG1
HMGCS1
E2F6
LRRC61
ACTR3C
ANK1
COX5A
SINHCAF
CYP51A1
HYOU1
NUP133
LRIF1
EGLN2
SGF29
SON
GART
PIGW
MYO19
BHLHE40
KMT2C
PRPF19
BACH1
STIP1
TMEM39B
HEXIM1
CCT2
DUSP28
ANKMY1
G3BP2
SRCAP
LOC730183
ATL2
CHD4
C2orf42
NCDN
KIAA0319L
SAT1
ZNF487
DYRK1A
KMT5A
PRELID2
IPO11
SLC25A4
RPL22L1
SERF2
DYNLL1
TXLNA
EIF4G1
U2AF1L5
U2AF1
CAMLG
MYO9B
HAUS8
DIPK2A
KDM5B
FAM133B
SNRNP70
SMIM29
PDCD6IP
PDLIM7
SVBP
ERMAP
GLCCI1
ARRDC3
PIK3R3
INO80
CREG1
SNAPC5
USP34
ZCWPW2
AZI2
TRA2A
H4C4
RHBDD3
EWSR1
CCDC71L
CTCF
HNRNPU
TBPL1
ZER1
ARID1B
THBS3
MTX1
KAZALD1
ZBTB7B
SMARCC1
ERBIN
LUC7L3
COMMD1
CCT4
PCNT
C21orf58
YWHAH
UBE2J2
AP4E1
RPS21
SLC30A6
CACNA1H
LARS2
FAM76B
CEP57
CDKN2AIP
CENPS-CORT
CENPS
MRPL12
SMG9
RMND5B
RNF111
ATXN2L
RBBP6
MND1
ZBTB8OS
RBBP4
KDM1A
LDLR
ZNF343
NUDT3
SOCS2
YPEL3
CNBP
CD2AP
SETD2
CDK4
NFKBIZ
CBSL
CBS
CEP135
PPP6R3
NUBP1
EXOSC8
HSPA4
RPS19
METTL9
DCLRE1B
AP4B1
PHF3
PTPN2
NADK2
E2F8
DGUOK
SEPHS2
POLDIP3
WTAP
ZNF644
GSK3B
KANSL1
ZNF397
SART1
TMEM222
RAD50
PEX3
ADAT2
DDX50
CABLES2
CLCC1
MAPRE1
HPCA
PTPRU
BRK1
R3HDM2
RAB12
CXCL2
TAF4
PSMD7
INTS6
ETFA
PPT2
NFAT5
PRRT1
GCN1
BCORL1
OTUD4
BTG1
NSD2
UNK
TMEM168
ORC2
MTRNR2L1
NBN
ZNF627
MTF1
PFN1
NCOA5
ZC3H12A
ATP2A2
RPS4X
ING5
VPS37D
DDIT3
SLC2A1
MTR
P4HB
ALKBH2
SDHAF2
CPSF7
TUBGCP5
CALU
UFL1
CCAR2
B2M
MFSD14A
GABPB1
CHCHD10
DYNLL2
TRIM13
GSE1
HOMER3
S100A13
CHTOP
ZFP1
EIF4H
PHGDH
PAXBP1
KAT6B
C1QTNF5
DNAH14
MANBAL