ChIP-Atlas: Target genes

Potential target genes for ZNF3

Query protein: ZNF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457356 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
ZNF3's Target genes

◢ ZNF3: Average

◢ SRX3322078: Hep G2

◢ SRX3322079: Hep G2

◢ SRX11165972: K-562

◢ SRX11165973: K-562

◣ SRX5457356: K-562

◢ SRX359978: LoVo

◢ ZNF3: STRING

NPAS4
CCDC9
PDE8A
ANKRD13C
LIN28A
XKR7
HTR5A
NKX1-1
DRAM1
MTRNR2L2
MSH3
DHFR
SUPT3H
KIF5C
ATG4D
MTRNR2L8
PSAP
TMEM63B
MRPL14
JAG2
ELANE
CFD
IQSEC3
CCDC200
L1CAM
TNFAIP8L1
INSM2
CELSR3
MTFR2
TMEM119
PIP5KL1
DPM2
MAFK
RTBDN
MAST1
CRK
ARL4D
NEDD1
PLIN3
TMEM114
DUX4
GDF5
CEP250
WDR74
STX5
UBQLN4
RAB25
LAMTOR2
TPT1
CPLX2
RPS28
NDUFA7
PPP5D1
CALM3
EPHA10
MFAP3
FAM114A2
ZC3H18
CARHSP1
RAPH1
FZD1
FUCA2
UBE2H
ZNF182
SPACA5B
SPACA5
HPCA
FAM24A
RPS15
APC2
FBXW8
SPOCD1
MTRNR2L1
MUC3A
DHX16
EAPP
SYCE2
CCDC130
DRD4
LRRC25
ACAT1
ART1
TMEM242
REX1BD
MTRNR2L9
YTHDF2
THUMPD1
ZNF23
COL23A1
GLRA1
CIC
ETFDH
C4orf46
TFB1M
PHRF1
PRKACG
MAMDC2
PEAK1
HMG20A
CPNE9
IL36RN
IL36B
MAPK8IP2
EIF1
PPP1R18
NRM
SLC39A13
EML2
KCNN1
SNX19
AP1M2
SIGLEC10
SH3PXD2A
CPT1A
NUP214
TTC12
SMPD2
PPIL6
MICAL1
SNRNP25
POLR3K
KLK4
TMEM43
CHCHD4
SCG3
MYH9
IQCE
OSBPL9
ELOVL6
RIPPLY2
CYB5R4
CCDC22
CACNA1F
DLGAP3
FTH1
TOP3B
EBI3
RBM38
SNRPA
C19orf54
VARS2
GTF2H4
KIAA1958
C9orf147
TMEM72
RTN4R
MANEAL
RAP1GAP
CACNB2
NDUFB7
PRR29
ICAM2
RBP7
ICMT
HES3
KLHDC8B
CCDC71
LCK
FAM167B
UBB
LILRB4
SNAP25
H4C2
H3C2
H2AC4
MAP3K3
BARHL1
MED23
PSMD9
HPD
BAHCC1
POMGNT1
DNAJC6
ZSCAN25
TANGO2
ARVCF
RAB3A
NUF2
PTGIR
GNG8
BROX
AIDA
MOGAT2
PTPRN2
VGF
MRPL2
KLC4
CUL7
ZNF391
USE1
OCEL1
LYPLA2
GALE
PCBP1
TCIRG1
NDUFS8
RHOG
RPS7
YES1
PDE4A
RTN3
DMTF1
ATL3
TPK1
CEP295
EPHA2
H4C12
H4C11
H2BC14
H2AC14
GALR1
PLEKHN1
NOC2L
KLHL17
FCMR
CCDC71L
NEMF
YDJC
CCDC116
SDF2L1
FGD3
FAM102B
RAB10
MRPL40
HIRA
TGFB3
IFT43
ERN2
ONECUT3
SMCO4
SLX1B
SLX1A
CORO1A
BOLA2B
BOLA2
HBG2
HBG1
CACNG3
TBC1D19
SSBP2
TMEM14B
BLOC1S5
SNAI1
AKAP14
CYP4V2
PRAME
TJP3
RHAG
PIP5K1C
ANKHD1-EIF4EBP3
ANKHD1
ANXA11
SDSL
TMEM9B
EEF1AKNMT
UAP1L1
SAPCD2
STX16
EIF2B3
E2F6
KLHL22
CADM3
TEFM
ZBTB8OS
RBBP4
MAT2A
RAB37
SPDYE16
PKD2L2
CD55
C19orf71
RGPD1
RGPD2
SCRT1
DGAT1
MED15
CMIP
RPL5
SMARCC1
N6AMT1
DCAF10
CYP3A43
ATP2A3
ZCCHC7
DDB2
PRF1
SRRM3
SF3A3
CCT8L2
CCT2
WDR36
H1-2
RGS19
OPRL1
LKAAEAR1
HDAC1
ENTPD2
TRIT1
ZSCAN9
TCAIM
KCNE1
H2BC15
H2AC15
RABGEF1
ZNF746
PGBD2
KRBA1
BIRC2
FRG2C
MYLIP
COX20
PUM1
ORC5
ZNF628
ISOC2
HPS5
GTF2H1
MICALL2
SDCCAG8
RITA1
DDX54
CEP170
EPOP
AGAP3
TK2
CKLF-CMTM1
CKLF
ZNF655
TPH2
CTNNB1
LGR6
COA3
CNTD1
H4C9
H2BC12
H2AC12
ANGPTL7
CENPE
STRN4
SMARCC2
FKRP
IRF2BP1
SUSD3
NET1
STK38
SELENOH
OGDHL
KIAA1191
ARL10
COLEC11
TTC26
WARS2
SCFD1
NBPF1
THEG
IL26
LSM10
MGAT1
ING3
PRSS22
RBBP5
DNAH14
H2BC17
H2AC17
H3C12
FUS
FAM133B
SMIM17
ST7
KDM4A
HERPUD2
H2BC11
H2AC11
SUMF1
RNF214
PCSK7
CENPC
CBLL1
TIPARP
CALB1
BTNL9
TRIM44
TUBB3
TRDMT1
TRA2B
MC1R
CSDE1
CHD2
EEF1E1
MAPK1
HMGCS1
AARS2
INKA2
DDX20
NPPB
PBLD
HNRNPH3
NFE2L2
NUP153
NR5A1
ECE1
H6PD
ID1
UNK
SRSF7
H3-3B
TULP1
PNRC1
PEX3
ADAT2
ATP5MC2
SPG11
HMGN1
FBN3
NGB
TATDN3
SCGB1C2
SCGB1C1
ODF3
NSL1
FAM227B
DTWD1
NBAS
ACBD6
RMND5B
FH
SCAMP2
METTL15
KIF18A
SREK1
LHX9
C1orf53
YIF1A
TMEM151A
HIC2
H2BC21
H2AC21
H2AC20
GSDMD
TXNDC2
SSBP1
THAP9
SEC31A
TMEM39B
GOSR1
FOLR1
P2RX6
NUFIP2
PGBD5
H4C3
H1-6
ZBED9
SLC35E2B
SLAMF6
DUSP10
COL1A1
UBR4
PRR15
POLRMT
FGF22
EED
CSNK1G2
INTS12
GSTCD
SLC44A2
YAE1
TBL2
MORC3
LAMTOR5
EPN1
ENTPD3
BBS5
OSER1
CSF3R
SLC35F6
PIRT
NCKAP1L
LMTK2
LZTR1
SMIM30
BIRC3
STX18
TMEM167B
SLC7A4
ITGA8
FAM149B1
ECD
PHF19
OAZ1
NAF1
MKLN1
JSRP1
ADARB1
LMOD1
SLC29A3
RTL10
NEK1
INTS6L
H3C6
H2BC8
H2AC8
GNB1L
COX18
CLCN3
BRIP1
ZNF718
ZNF595
MRPS7
MIF4GD
GGA3
LUC7L2
FMC1-LUC7L2
FMC1
SIKE1
SCAMP4
RSPH14
RAB36
KCTD3
EP400
ADAT3
EVI5
PPIP5K2
PELI1
NSUN4
PTPRS
LRIF1
WASL
MRPL17
ENTPD8
ATP5MC3
RPS29
POLR1F
RICTOR
MPZL1
AP3B2
ZNF484
TTC4
TMEM217
TBC1D22B
ANGEL2
ADGRE2
PRX
SLC25A51
SERTAD1
MRRF
FBXO22
ERI1
CBWD6
CBWD5
CBWD3
MTRNR2L10
LPIN1
MARCHF4
RPS26
UBR2
MLH1
MIA3
HINT3
GTSF1
EPM2AIP1
CLASP2
CETN3
RPEL1
RIPPLY3
IQCB1
HSD3B7
GAS8
EAF2
DBNDD1
ALDH18A1
GPR37L1
WDR48
SCN11A
LOC102723971
ZSCAN22
RCHY1
G3BP2
DTX1
ENOSF1
KLHL20
CDC73
RAP1GDS1
NRF1
NBN
IL20
STX3
METTL2B
LRRCC1
LRRC37A3
JMJD1C
FASTKD1
FAM111A
MLN
FIBP
CTSW
PTEN
KLLN
SP3
SDCBP
PSMG1
HECTD4
ANKRD46
PROC
HDAC2
NFATC2IP
PHTF1
TRAF6
SF3B5
RAG1
CYP2R1
COL6A2
ZNF184
DNPH1
SLC25A25
RBM28
THOC3
EPS15
TMEM267
ACTL6B
VPS26C
UBN2
TMEM63A
NIBAN1
LEFTY1
GPR78
GPN3
FAM216A
ERRFI1
CDC42BPA
ITGB3BP
EFCAB7
TEX46
PACC1
KDM1A
ERCC1
CEP85
ARHGEF19
CHGB
CCNC
MST1
RFC1
RESP18
PPIL2
PAXBP1
NOL7
CPNE4
CHD1
CCNL1
POLR1B
XRCC2
MRE11
LYSMD3
CENPW
ANKRD49
PTP4A2
RNF141
PIP4P2
KMT2E
FBXO4
ATXN1
CA4
NUDT7
NR1H3
DPY19L4
ACP2
H2BC5
H1-4
THADA
SPATC1L
PNPLA6
KCTD7
INPP5D
TTC33
TAF13
SLC5A3
SDHAF3
MRPS6
CCND3
YARS1
S100PBP
RPL32
PAFAH2
MOB1B
H2BU1
H2AW
GOPC
FANCD2OS
CCDC138
BRK1
AGBL3
USP30
SVOP
ZNF425
ZNF398
POLR3E
SLC35A3
WTAP
SOD2
RNF39
PVRIG
PPP1R11
POLR1H
HBP1
GOSR2
FEM1C
EPRS1
COA7
CDC42
TASOR2
CNNM2
UMAD1
STAM2
SH2D1B
PRMT2
PARPBP
NUP37
ERBIN
DCAF8
CWC22
PALM
IQSEC1
STRADA
RAD23B
PRSS57
POT1
NAP1L4
BPHL
HACL1
BTD
TCEANC
TTC9B
STMP1
PDLIM5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS18C
MIER1
HNRNPA2B1
HELQ
GATA1
DNAI4
CCDC188
CBX3
BSND
ANP32B
TMEM88B
ANKRD65
RTP3
LTF
INO80C
GRPEL2
GPR61
GNAI3
EXOSC9
CHRM4
UFL1
THAP5
PAX6
MMP8
MMGT1
MGA
HSFX3
HEY2
FAM155A
EOLA1
DNAJB9
CNTRL
C5
ABCA3
TRIP4
PCLAF
THG1L
UBE2L3
TSACC
TADA1
SNAP29
RPL15
PI4KA
PDCD2
NKIRAS1
MYL12A
MRPS16
KLHL12
HSPA5
H2BC4
H2AC6
FIP1L1
ELF2
DNAJC9
CCT3
HDAC11
BAIAP2
TSEN54
LLGL2
CASKIN2
RAD9A
ELAVL3
SRSF1
SLC25A13
LHFPL4
IFNAR1
GTF2H3
EIF2B1
CLCF1
MYH7B
GSS
LSM5
AVL9
PAPSS1
PDE4C
LTN1
VPS37C
USP45
TSTD3
TMEM60
SRSF2
SLC25A36
RBM7
RBBP6
RAB18
PSMB10
PHTF2
MICOS10-NBL1
MICOS10
MFSD11
LCAT
DUS4L-BCAP29
DUS4L
CTRL
CPED1
COG5
C11orf71
LHFPL5
CLPS
GTF2H2
ANK1
DHX40
ZNF614
TNPO1
RTN4
LIMA1
KRT28
EFR3A
BAZ2B
ATP6V1C1
H4C14
H3C15
H3C14
H2AC19
H2AC18
ZMPSTE24
UTP20
TSPYL2
RINT1
RHCE
PUS7
PRPF4
OPN1SW
MACO1
EEA1
DARS1
CZIB
CES5A
CEP152
CDC26
CCDC136
B2M
ALKBH3
KPTN
ZNF248
XKR9
RWDD1
PPT1
PPP1R12A
POLK
PHKA1
NDUFS4
NDUFA4
LACTB2
KDM4D
ITPR1
GPR89A
CWC15
CERT1
AEN
RGS3
SAYSD1
ZFC3H1
XPC
UBE2D3
THAP2
MPHOSPH10
MCEE
LSM3
FBXW2
ALG8
ZFP36
ZKSCAN8
XXYLT1
UNC5B
SLC30A5
PLEKHG2
PCBP3
NDUFS3
MRS2
LYPLAL1
LRRC8B
KBTBD4
FAM180B
DIO1
ARHGAP39
ACSL3
SPDYE7P
POM121
SMARCAD1
RBM45
PDE11A
DUS2
DPEP2NB
DDX28
ZNF627
YTHDC1
SYNJ1
SEMA6B
OCIAD1
KATNA1
ETAA1
CBFA2T3
DMAP1
ZBTB22
VRK2
TOMM20
TAPBP
SMIM40
RANBP2
RAB33A
PPP1R8
POLR2C
NDUFV2
MTPAP
H4C15
GFM2
ERCC6L2
EHD1
DAXX
CFAP299
AIFM1
LMO7
LSR
XYLB
TXNDC12
TNPO3
TMEM183B
SYPL1
SUPT4H1
RC3H1
PRRC1
PRR20G
MTX2
MRPS35
MRPL22
IGLL5
GEMIN5
FRA10AC1
EML4
BTF3L4
BLOC1S6
ATP10D
AGPS
GCFC2
DNAAF2
MTF2
DDIT4
ZNF397
ZCWPW2
TBC1D15
SLC2A1
RRM2
RAB5A
POLB
PDCD6IP
H3C10
H2BC13
H2AC13
EFHB
CRB1
AZI2
AP3B1
AIG1
ADK
THAP7
NDUFS7
MTR
TTC30B
TIMM17A
SNX14
PRKRA
PJVK
NSRP1