ChIP-Atlas: Colocalization analysis

Colocalization analysis for GCM1

Query protein: GCM1

Cell class: Placenta

Sort key: SRX26001063 | Trophoblast stem cells

Color legends

ChIP-seq data:

H-H

H-M

M-M

H-L

M-L

L-L

N.D.

Same

(Peak intensities are High, Middle or Low)

STRING data:

1000

750

500

250

N.D.

(Values = STRING's binding scores)

Downloads: TSV (text), GML (Cytoscape)

Links: Movie and Document for ChIP-Atlas Colocalization

Cell types	Exp. IDs	GCM1's Colocalization partners		◢ GCM1: Average	◢ SRX26001062: Trophoblast stem cells	◣ SRX26001063: Trophoblast stem cells	◢ GCM1: STRING
Trophoblast stem cells	SRX26001063	GCM1	↻				≫
Cytotrophoblast	SRX5162257	RELB	↻				≫
Cytotrophoblast	SRX5162256	RELB	↻				≫
Cytotrophoblast	SRX5162255	RELB	↻				≫
Cytotrophoblast	SRX5162254	HDAC1	↻				≫
Cytotrophoblast	SRX5162253	HDAC1	↻				≫
Cytotrophoblast	SRX5162252	HDAC1	↻				≫
Cytotrophoblast	SRX5162248	CREBBP	↻				≫
Cytotrophoblast	SRX5162247	CREBBP	↻				≫
Cytotrophoblast	SRX5162246	CREBBP	↻				≫
Trophoblast stem cells	SRX26001062	GCM1	↻				≫
BeWo	SRX24602134	VGLL1	↻				≫
BeWo	SRX23800504	TFEB	↻				≫
Trophoblasts	SRX22817942	EP300	↻				≫
Trophoblasts	SRX22817941	EP300	↻				≫
Trophoblasts	SRX22817940	EP300	↻				≫
Trophoblasts	SRX22817939	EP300	↻				≫
Trophoblast stem cells	SRX20732799	TFAP2C	↻				≫
Trophoblast stem cells	SRX20732798	TFAP2C	↻				≫
Trophoblast stem cells	SRX20732797	TFAP2C	↻				≫
HVMF	SRX199858	CTCF	↻				≫
HVMF	SRX199856	CTCF	↻				≫
BeWo	SRX1993444	ZSCAN5A	↻				≫
BeWo	SRX1993439	ZSCAN5B	↻				≫
BeWo	SRX1993438	ZSCAN5B	↻				≫
BeWo	SRX1993437	ZSCAN5A	↻				≫
Trophoblast stem cells	SRX17306263	NRIP1	↻				≫
Trophoblast stem cells	SRX17306262	DLX5	↻				≫
Trophoblast stem cells	SRX17306261	DLX5	↻				≫
Trophoblast stem cells	SRX17306260	ASCL2	↻				≫
Trophoblast stem cells	SRX17306259	ASCL2	↻				≫
Trophoblast stem cells	SRX17306258	DLX6	↻				≫
Trophoblast stem cells	SRX17306257	DLX6	↻				≫
Trophoblast stem cells	SRX17306256	DLX6	↻				≫
Trophoblast stem cells	SRX17306255	DLX6	↻				≫
Trophoblast stem cells	SRX17306253	TFAP2C	↻				≫
Trophoblast stem cells	SRX17306252	TFAP2C	↻				≫
Trophoblast stem cells	SRX17306251	TFAP2C	↻				≫
BeWo	SRX16711529	ARNT	↻				≫
BeWo	SRX16711528	ARNT	↻				≫
BeWo	SRX16711527	ARNT	↻				≫
Placenta	SRX16500272	CTCF	↻				≫
Placenta	SRX16500271	CTCF	↻				≫
Placenta	SRX16498487	CTCF	↻				≫
Placenta	SRX16498486	CTCF	↻				≫
Trophoblast stem cells	SRX16314550	TFAP2C	↻				≫
Trophoblast stem cells	SRX16314549	TFAP2C	↻				≫
Trophoblast stem cells	SRX16314548	TEAD4	↻				≫
Trophoblast stem cells	SRX16314547	TEAD4	↻				≫
Trophoblast stem cells	SRX16314546	MAFK	↻				≫
Trophoblast stem cells	SRX16314545	MAFK	↻				≫
Trophoblast stem cells	SRX16314544	GATA2	↻				≫
Trophoblast stem cells	SRX16314543	GATA2	↻				≫
Trophoblast stem cells	SRX16314542	FOS	↻				≫
Trophoblast stem cells	SRX16314541	EP300	↻				≫
Trophoblast stem cells	SRX16314540	EP300	↻				≫
Trophoblast stem cells	SRX10003072	MSX2	↻				≫
Trophoblast stem cells	SRX10003071	MSX2	↻				≫
Trophoblast stem cells	SRX10003070	MSX2	↻				≫