ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
ZNF76
ISX
HES1
ANKRD40CL
STX16
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
NEK2
KRTAP3-1
HK1
RNPEP
LRRC59
APOA2
CDK5RAP1
TCF20
HOXC5
EPRS1
ARHGEF12
INTS9
HMBOX1
PI3
GUCY2C
ZBTB45
ZNF501
MRPL44
MALRD1
CDHR5
SLC45A4
HOXC6
HOXC4
PIK3AP1
RHOH
CCDC90B
STAT3
CASC3
ATF3
NUF2
ADAP1
HOXB4
ADNP
ZNF226
UBR2
CXCL2
RBM47
TUT1
KCTD5
C1orf226
TATDN3
NSL1
TEFM
PIK3C2A
DEPP1
NNMT
NCOA5
PRPF19
LRP2
ALG10
ZNF512B
ZGPAT
ARFRP1
AKR1E2
DUSP18
SPOP
MRPS16
GRAMD2B
NFAT5
AJUBA
PPP1R3D
FAM217B
JAML
MIA3
HNF4A
TRIM2
TMPRSS4
GBA
NR5A2
INTS4
ACOX2
MMACHC
CCDC163
MRPL53
TMEM248
CALM2
MRPL21
IGHMBP2
KMT2D
STAT6
SLC30A10
TOB1
BBS1
TM9SF4
YWHAB
THAP1
CFAP69
TRMT61B
CHPT1
PEX3
ADAT2
TFPT
PRPF31
BANP
CTNNBL1
WDR36
DCP1A
CCNL1
ZNF530
ALG10B
HIBADH
HPN
H4C12
SMG7
USP30
NPAS4
UBXN1
RAD51B
MARK2
E4F1
RIC8B
ADARB1
S100A2
TMEM126B
DLG2
TMEM60
PHTF2
KPNB1
RBBP5
GCNT4
MGAT4A
HEPH
RAB3C
SLC30A4
GSDMB
TPX2
IQSEC3
MEP1A
DDX23
TMEM69
GPBP1L1
SOX30
C5orf52
MAZ
ZNF341
TARBP2
HOXB3
MRPL3
UBB
SNX17
EIF2B4
CRLS1
VILL
ACOT1
EMP1
SLC51B
RPL23A
PCK1
SDHAF3
NDUFS7
VIPAS39
AHSA1
DAGLB
STAT1
PLEKHM3
ANK3
ZNF248
ALKBH3
MRPS14
PPIP5K2
GIN1
PRPF18
BMF
EIF3F
RRN3
TTBK2
RPS7
NCOA3
ARHGDIB
TSR3
GNPTG
KIF3B
KBTBD8
TOB2
G3BP1
ZNF721
PIGG
ZNF770
PLD3
C19orf47
AP3B1
HERPUD2
SLC18A1
C17orf75
SIRT4
SLC33A1
TMEM199
POLDIP2
COX16
CFAP20
PLEKHG6
NR1H3
ACP2
HACD2
DYNLT3
MARCHF8
JMJD1C
TNFAIP1
IFT20
GTF2H2C
GTF2H2
RNF7
FRA10AC1
SREK1IP1
CWC27
SC5D
MPZL3
SCAND1
LMO7
ARHGAP27
INTS6
CHKA
ATXN2L
CASP4
UBAP2L
C1orf43
TACO1
PDPR
ARHGAP45
CCDC59
ELP3
ZSCAN32
ZNF174
NODAL
MANSC1
SNX19
PIGU
TBRG1
SH3D19
TFRC
COL5A2
IFRD1
MOB4
MMP15
H4C4
TBL1X
ATP2B4
RAPGEFL1
NDUFC2-KCTD14
NDUFC2
FASTKD1
SF3B2
GSTO1
TMEM123
SLC25A16
HOXB9
NR1D1
ARIH1
YAP1
MYL6B
EPC2
RANBP2
CTDP1
CKAP5
RPL37
ZNF384
TMEM242
PRRC2C
BUD13
ARMH3
SLCO2B1
SH3RF2
KDM1A
KBTBD7
POLD4
GULP1
PKP4
OGDHL
ZFP62
AKAP9
PBLD
HNRNPH3
ZFHX3
SNRPC
DGCR6L
TMEM167B
INTS5
KRR1
ZCCHC8
GSK3A
SUPT7L
SLC4A1AP
ADGRE5
MTF2
MED23
C11orf65
NEURL2
DNASE1
CTSA
TSSC4
USPL1
HMGB1
SURF6
FAM227B
DTWD1
CALML4
TSEN15
ABT1
SP2
ZNF510
SMUG1
RALGAPB
MBTPS2
SMIM30
SCAF1
PLIN2
SPRED2
WDR89
EHBP1
ADGRG1
STK31
SLC25A36
TEAD4
AAR2
RNF145
MRPS33
LIMA1
LTN1
RAB5B
INTS12
GSTCD
CLPB
DENND4A
ARFGAP1
CTSB
PPIL1
SLC30A6
LIN37
DSTYK
CUL7
ANKRD13D
MTG1
MAF1
FANCD2
STT3A
KIFBP
CHCHD3
COPS7B
NMNAT1
LZIC
BLOC1S6
HSD17B4
LASP1
ARL8B
AGR2
MITD1
ZNF749
POFUT1
PLAGL2
BOLA1
ARHGEF28
AQP11
RBM25
RTTN
VTA1
NMBR
DPY19L4
CLDN12
TYMSOS
TYMS
EXD2
HOOK2
FURIN
CCDC88A
GTF3C3
OGT
WDPCP
MDH1
SYMPK
PRORP
PPP2R3C
NAGK
FOXA3
OTUD6B
SLC46A1
ATP5MF-PTCD1
ATP5MF
IDH1
TJP3
ASMTL
SF3B5
CRBN
RCE1
PRDM11
VPS50
HEPACAM2
SELENOP
RPS3A
DIDO1
CLEC16A
ATL3
CYCS
OPA1
SAR1B
PLEKHG1
NRBF2
DMAP1
CDC42BPA
BAX
PPIL3
NIF3L1
GTF2H2C_2
KLB
RAB5IF
FITM2
PDSS2
POLR2J3
GTF2IRD2B
PSAP
APOLD1
NR0B2
DCTN3
RHEB
ZNF212
RTEL1
ZNF337
RPL24
LY6G6D
ARID4A
ETV4
ZC3H15
ZNF577
OIP5
NUSAP1
NOSTRIN
OGFOD2
IFTAP
TMEM97
ZW10
ZSWIM3
ACOT8
TTC36
TMEM25
PPP1R12C
CREBL2
HOOK1
CLTC
RSAD1
MTIF2
FGFR4
EIF1AD
BANF1
TMED5
CCDC18
OTUD7B
SHANK2
SEC23A
AMOTL2
TMEM230
RALGAPA2
ZC3H6
KANSL3
STAU1
NPHP1
FOXN3
TRIM15
SNX5
MGME1
PPME1
C2CD3
MKRN2
ZNF622
UQCRFS1
RESF1
ORMDL3
JTB
FAM98B
TBC1D19
TOP3B
CMTR2
NOTCH2NLB
DDX46
CTU1
TAMM41
PUS7L
IRAK4
CIZ1
CCDC186
CNOT1
YAE1
GTF2IRD2
LATS2
DDX19A
TES
CCAR2
ZSWIM6
KDM5B
SRCAP
LOC730183
PALD1
LGMN
CALM1
ZBTB20
PEX12
MRPL40
HIRA
WDR74
YWHAZ
BMPR1A
PSMD3
ZMPSTE24
AURKAIP1
MRPS15
SLC24A1
SCNM1
LYSMD1
INTS14
MRPS17
G0S2
AMACR
C2CD5
LARS1
ZNF805
ZNF233
RTRAF
PIBF1
DIS3
HUS1
RNF43
ATP5MC1
CYP51A1
CSTF1
AURKA
RNF34
RGMB
SERTAD3
TMEM176B
TMEM176A
OVCA2
GTPBP10
EIF4EBP2
ARNT
CCDC15
ANXA4
ATP5MPL
SELENOH
P4HA1
CEP350
NDUFV1
DYNC1I2
SSBP2
CLP1
SNRNP70
MRM3
GLOD4
FNIP2
EPC1
IST1
UGGT1
PAAF1
COA4
ZNF211
ZNF317
GPRC5A
EIF3D
MZT1
BORA
RPL27
WDR33
MCTS1
SORL1
CCDC150
SRP9
WDR75
PKIB
KLHL12
GOT2
MNAT1
TSC1
RPTOR
MT1F
HNRNPAB
GFI1B
CEP120
ZNF235
USP3
MRPL16
B4GALT7
HNMT
HIKESHI
RBM6
REXO2
PICALM
RPUSD4
FAM118B
RAB30
HBS1L
UGT2B7
METTL3
GATAD2A
CCNT2
PPP1R12B
TTPAL
TIMM23
MVB12A
ZNF565
ZNF146
OXSM
NGLY1
TRIP4
SRPRB
LYPLAL1
SFR1
SPRING1
RNFT2
CCNDBP1
ZNF17
SH3TC2
WASHC2A
DNM1L
YPEL5
LDHA
UCHL5
RO60
MTERF1
UBE2V1
EIF3K
COA1
STAG1
ZNF26
UBA52
KIAA1586
DEF8
KHSRP
SKIL
NLK
YTHDC1
FSTL3
AP5Z1
HMGCR
HTRA2
TGOLN2
RNF214
PCSK7
ID1
PCNA
DLAT
DCLRE1C
ZNF292
KMT5B
NECAP1
MRPL10
LRRC46
GGCX
KDM3A
CLASP1
TVP23B
S100A14
NOL7
MDP1
MDM2
FEM1A
H4C15
H4C14
ZSCAN22
MORN4
DHDDS
TMEM140
TFEC
SPRY2
POGLUT3
HSP90AB1
PHYHIPL
FGFBP1
MTRNR2L8
MRPS31
CAPNS1
TCTA
RHOA
POLR1B
ZFP2
PPID
POMZP3
NUDT5
CYP2S1
COA3
CNTD1
CDC123
AP1M1
CDK12
BLCAP
SHF
ACVR1
NUP54
CIAO3
ZNF461
TAF1D
CDKN2AIPNL
C11orf54
MRE11
ANKRD49
POLK
CERT1
CALR3
C19orf44
NME1-NME2
NME1
NCR3LG1
FOXJ3
COMMD2
STX18
ZBTB40
TBPL1
SPIN1
RCAN1
HDAC2
GTF2H4
NFE2L2
FAM149B1
ECD
C2orf42
MYL6
SYVN1
THYN1
SPRED1
RPP14
PAX6
HTD2
GSDMD
FBH1
DUS2
DDX28
COMMD9
CDC42
ANKRD16
ACAD8
KNL1
H4C11
DDX1
IARS1
SLC3A2
PRPF6
RTN4IP1
QRSL1
JRK
CREBZF
ZNF628
TCIRG1
ST3GAL6
RPS26
CALCOCO1
AP1G1
CTR9
CISD1
ZNF518A
NEU1
UTP25
ZNF23
SRRM3
SGF29
CTSC
ATAD3B
KAT6A
HAL
CHD8
ZNF239
ZNF221
TRAPPC10
SERPINB6
BRCA1
ANAPC15
SH3BGRL2
COMMD3-BMI1
COMMD3
BDP1
TTI2
HEXIM2
ARF4
ATP5F1E
TOMM7
CYLD
LRP6
UBE2Z
WNK4
CCDC66
THAP12
SLC37A3
PRPF8
PAK1
NUP62
NSA2
IL4I1
GVQW3
GFM2
ATF5
SMG5
ZBTB26
PAPOLA
DYNC2H1
ZNF544
ZNF165
XYLB
PDE8A
F7
ENGASE
DNAJC9
NDUFAF5
ESF1
TXNL4B
DHX38
MAD2L1BP
GTPBP2
FDXR
TRAF6
SIK2
SCAMP4
RAG1
CCDC117
ADAT3
PRH1-TAS2R14
DUS4L-BCAP29
DUS4L
COG5
SMIM10L1
PPRC1
ZNF56
MRPS18C
HELQ
VTN
SEC62
CHMP4B
STRADA
YME1L1
WASHC2C
TBL3
RAB5C
NFKBIA
MICU1
MAP3K8
THRAP3
NOTCH2
FBXW2
SLC25A13
PTK2B
CCNJ
ALPI
GOLGA5
ZNF219
SMARCAL1
DLC1
DKK1
TSFM
LARP4
VPS37B
SP6
PHB2
OTUB1
RGPD6
RGPD5
PPP6R3
AASDH
TEN1
ACOX1
FNIP1
RPS13
TMEM126A
TIMM22
TAOK1
SMCHD1
RPL10A
RGPD8
GPAT3
DYNC2I2
TAPBPL
ZNF33A
SRSF6
PRKAB2
CHD1L
MPHOSPH10
MCEE
ELP6
DUS3L
NOTCH2NLC
SSNA1
RABL6
PLD6
NDUFAF1
KCTD18
ARL2BP
ANAPC2
TSPAN8
ZDHHC5
NRDC
EPCAM
CWF19L2
TIGAR
RNMT
FAM210A
SKP2
LMBRD2
TUBG1
RETREG3
RAD54L2
CD55
COA6
COX20
ZC3HC1
ZNF230
SULT6B1
PDF
GTF3C6
CEBPZOS
BRF2
CDC14B
DNM2
ZNF25
THNSL1
NDUFA5
CCAR1
C16orf46
SRPRA
ZNHIT3
APOBEC1
RPS5
RTF2
PLAAT5
NFYB
ABRAXAS2
NRL
DCAF11
THAP10
LRRC49
EMSY
UBOX5
FASTKD5
OBSL1
MAP1LC3B
KDM4D
INHA
FBXO31
CWC15
FABP1
SUGT1
RAB1A
RBSN
OSER1
PITRM1
BUB3
CRYGC
CLNS1A
WDR70
TSR1
TMEM86B
SGSM2
SEC13
SART1
NAALAD2
MAP2K1
KDM5A
FBXO4
FBXO22
CHERP
CCDC77
CS
IMP4
CCDC115
DBI
C2orf76
HEATR1
RAB11A
POLE4
ZNF571
ZNF540
VAMP5
USE1
SGK2
PNPLA6
OSBP2
MBTPS1
AQP10
AARS2
PREPL
CAMKMT
UTP15
ANKRA2
AGGF1
PPIG
UBC
TTC26
NUP58
MRPL55
RDH11
TOMM40
KRT8
HINT3
CLDN4
ZNF394
TRMT44