ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111321 | BE(2)-C
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◢ SRX111320: BE(2)-C

◣ SRX111321: BE(2)-C

◢ HOXC9: STRING

NRL
DCAF11
DEPP1
TNFAIP2
GALNT16
SLC6A2
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
GLDN
ING3
UBXN10
NRSN1
FBXW2
ZSCAN31
STRN3
AP4S1
LPIN1
KIAA0319
SEMA5B
PRR13
GPR68
HOXC4
TOMM40L
APOA2
WIZ
SLC25A25
KATNB1
KCNAB2
PIH1D1
ALDH16A1
SLC17A8
DUX4
HES6
OLFML2B
SMYD3
PPP5C
RIMBP2
CMTM4
ITGB5
ZNF654
CGGBP1
DIABLO
C1orf185
SYBU
GFRA3
CPO
RMDN3
C6
MTRNR2L2
MSH3
DHFR
CITED2
MFSD6
CENPF
TIAM2
GRWD1
GABRA1
PHLDB1
LIMS1
GDF11
NCK1
ABCA12
DRGX
FAM163B
RAPGEF2
TLE3
SULT1C4
BFSP2
C14orf180
C1orf100
TBX15
LENG9
PHF14
IGFBP5
GNL2
KCNK16
TCF4
COMTD1
ELAVL4
CHD1
MACROD2
VAV3
SLC12A3
HOXC6
PRKD3
CRYBG1
SLITRK5
ZBTB45
IFT57
EXOSC2
ATG9B
ABCB8
CHCHD3
PARVA
PRKAR2B
P2RX1
MECOM
PLEKHS1
DCLK3
TNFRSF19
NTN4
COX16
RSAD2
KBTBD11
MTRNR2L1
LRRC15
MAD2L2
ZZZ3
ADGRD1
TSHZ2
FOXN4
HAPLN1
FRG2C
PHOX2B
OPRM1
RBKS
BABAM2
NTN3
TAS2R20
ZBTB39
KHDC4
ADCYAP1R1
DAOA
CYTH3
GGT1
STON2
EVI5L
ATF3
ZNF488
IQSEC1
IGDCC3
TFPT
PRPF31
CHRM3
SYNE3
DNAJB8
VPS52
RPS18
GJA5
SMAD9
SPINK5
GSX2
MTRNR2L8
TRIL
KL
PPM1A
KDM4B
EEF1AKNMT
NRG1
PLXNA1
NPTXR
LIMA1
ABAT
SGIP1
PLEKHA5
DRD2
GGCT
SLAMF8
VSTM2A
KIF26A
H3C15
H3C14
H2AC19
H2AC18
ZFAND6
CHST6
PRKG1
RARB
RAB11B
NSD2
PWWP2A
MPP4
DIPK1A
WNK1
DLX6
ZNF350
PPP3CA
B3GLCT
MFSD12
COX7A2L
MFSD8
ABHD18
ZNF510
SLC31A2
DIXDC1
RGS4
TIMM44
MTHFSD
C3orf52
ANKH
AOPEP
AFF3
CDH18
CATSPER3
TMOD1
FAM219A
DNAI1
SLC17A2
GPR107
LOXL1
LYN
CARS1
SH3GLB2
SLC7A14
SIRT4
UTS2R
BAMBI
USP40
PRKAG2
RAB39A
RIC8B
MAPK13
KHSRP
ZNF552
ICA1
MTA1
SH2D3C
PAFAH1B2
USP7
SEMA4B
PLA2R1
ZNF555
ACVR1
FRG2
SRP14
GOLGB1
PMVK
RAG1
ARFIP1
PDZRN3
CCNG1
PSMB2
CYP8B1
RMDN2
HEBP2
TECTA
MRPS14
ITM2C
SNAP23
CHD9
CP
ABT1
ARL14EPL
EFCAB6
QSER1
BEND4
RNF4
ITSN1
CRYZL1
HEXIM2
APMAP
PWWP3A
PDE3A
GPR83
CAPN10
CRYGB
PTBP2
ANKHD1-EIF4EBP3
ANKHD1
SLC35B4
ZNF608
COL21A1
ASNSD1
ASDURF
LSMEM1
TUB
NEMP1
TOM1
TMEM126B
DLG2
RAB14
GSN
EPRS1
FAM107B
PSMC1
TJP2
HTR4
FDPS
TCERG1
ZFPM2
PBX3
TBRG4
MAP1LC3B
FBXO31
NOMO3
NOMO1
TPM1
TMEM60
PHTF2
RBM15
RNF24
KCNAB1
AGL
ILF2
RACGAP1
PRPF4
CDC26
PCOLCE2
KNL1
TBCC
BICRAL
CALCOCO1
EIF3D
MRPL28
KCNK15
SLC48A1
XAB2
PCP2
HOXA6
HOXA3
ZNF132
VEPH1
PSENEN
LIN37
BCL9L
AMMECR1L
PDCD1
PRRC2B
SNX7
UBE2V1
CEP152
ADAMTS19
PSMD6
MARCKS
C14orf93
DBH
IGFBP3
GP5
SHC1
FLAD1
CKS1B
ARID5A
TBX2
RAB31
RAPGEF3
TBC1D4
PC
SUGP2
ARMC6
DHRS2
MC4R
REX1BD
TCP1
MRPL18
VSTM5
SLC18A1
CPN2
RHBDD1
ASF1B
DPH2
ATP6V0B
MRPL27
EME1
LIPG
TPGS1
SPSB3
PHKB
ITFG1
MEST
PTPDC1
AKAP11
ARHGEF3
ZNF667
FLYWCH2
RPS7
PRUNE2
MDM4
STAMBP
GDF5
CEP250
SORL1
GBA
ZSWIM4
TTC12
PRKAB2
CHD1L
C3orf38
MRTFA
TLN2
CAND1
THRAP3
FAM161A
PRR25
ASXL2
BAX
DPP8
ZNF566
ACSS2
PHF19
NOSTRIN
MAP2
SORT1
ARID5B
B3GALT2
KIAA0895
AP1M1
ANLN
RASGRP1
RFTN1
ADGRE5
FCF1
CREBL2
AREL1
EHD4
MKKS
SMCO3
SELENBP1
OSBP2
GPRC5A
HERPUD1
GNG12
ZNF749
PTBP1
WRN
PURG
RUFY3
MN1
NGDN
TUBB2B
RIMS2
TRERF1
RABGAP1L
TUBB1
ANO6
SNX6
NCOA2
NFYC
SYNPO
AHCYL1
POGZ
TLX3
ETS2
CCDC33
CAMK4
NDUFB5
MRPL47
WBP4
ELF1
GCSAM
NME7
BLZF1
ZNHIT3
RPS26
STYX
CCDC59
SDR39U1
FOXP1
NUMB
ERMAP
DDX41
CCDC38
AMDHD1
HOXA5
UHMK1
ANTXR2
MLLT3
TXNRD1
TIGD6
HMGXB3
GABRR1
SEPTIN11
CCDC130
ABCC5
KRT19
CERKL
WAC
POLR1H
ZNF417
TMEM100
FRMD3
RPP25
HES1
LCN9
GAST
INTS4
ESRRB
PDE4D
GRAMD1B
ZNF430
ZBTB40
TUBA1C
ID4
MEX3B
SRPK2
UBA5
YLPM1
TNRC18
LOC100129484
SEL1L
TDRKH
FAM214A
B3GNT4
DCC
LRGUK
BBX
PLAC1
PCSK6
LARP1
PDIA6
ZSCAN32
ZNF174
PODN
CHST12
USF1
WDPCP
GTF2A1
EGR1
ULBP3
CFAP69
CEP41
VPS72
LPAR5
RP1L1
LGALS8
GALK1
UBE2J1
TRAF7
CNPY2
RBM25
ZFYVE26
RAD51B
FOCAD
CCDC89
NOM1
SKA2
PRR11
TRIP10
GPR108
ECE1
CAPNS2
E4F1
MYT1
RPL27
FOXN3
COX7C
PAM
RHOQ
CFAP20
CDIN1
ATP6V1E2
AGTR1
PKD1L1
ALG10
UBE2S
COA1
NAPB
BAHCC1
SRRD
HPS4
SPATC1L
LRMDA
ASB6
TMCO5A
CYTH1
PRL
AKAP6
DHX8
ALG10B
ZMYND8
B3GNT3
TM7SF3
TDRD9
ATP5MPL
FGF14
SULF2
PRSS41
HS3ST5
PALB2
DCTN5
TMEM94
LRRTM3
CHAC1
POLR3E
SLC8A1
C12orf73
MAP1B
SLC7A5
SLC26A7
CYP19A1
FBXO34
HAPLN2
WDR46
PFDN6
CNIH4
JPT2
CNOT3
SLC36A4
ICE1
METTL7A
EML4
ZNF148
PABPN1
C15orf62
BCL2L13
ZNF25
CALM2
RBM12
CPNE1
ERCC6L2
NECAP1
SERP1
EIF2A
SMAD1
TUFM
SH2B1
COG7
SFRP4
EPDR1
ZNF226
RHOB
BCAS3
MTA3
KCNG3
ISLR2
ARL17B
ARL17A
THEMIS
FAM13B
KDM7A
HNMT
KCNT2
CARD8
DMAC1
GRK5
EPB42
ASB8
LINGO1
MRPL34
DDA1
EHBP1
SRCAP
SLC25A16
LOC730183
C12orf43
STARD13
KCNH2
SF3B6
FAM228B
IRS1
HIGD1C
DACH1
BAZ2A
UTP25
CEP85L
ZBTB12
EHMT2
C2
MOV10L1
HAND2
PTPRE
ZNF331
ETFBKMT
ANKRD40
HOMEZ
APBA2
CLDN4
ZNF586
PODNL1
DCAF15
MYL10
RBFOX2
SLC26A2
KCNMB2
COX20
LY6G6F-LY6G6D
LY6G6F
ABHD16A
CYP51A1
COG3
PSME3IP1
MICU1
TSPAN12
PPP2R2C
ELMO1
PRMT5
ZMYM1
DST
PARP1
MED27
SSRP1
P2RX3
RNF224
CYSRT1
PTGER2
OTOGL
SLC34A3
PXMP4
KDM5B
FAM160A1
DOCK1
CDKAL1
CDC25C
LARS1
IRF2BP2
AUH
OTUB2
MXI1
CLASP2
TAGAP
CSMD3
UBALD1
GTSE1
COBLL1
BTN3A1
RET
COPS7A
TRMT61B
THOC5
HTR2B
DGKB
MLC1
MIA3
WWOX
STK11
PHB2
SCAF4
ZNF234
ZC3H11A
ZBED6
TMEM178B
TAF1A
SLIRP
CPLX3
ALKBH1
VIPAS39
AHSA1
ZNF227
RBP5
CLSTN3
TSPAN14
SHC4
TUBG1
RETREG3
TNS1
NOMO2
VLDLR
ANXA2
RAB30
ZNF792
ZNF503
TXNL4B
SEPHS2
MESP2
DHX38
MGAT4C
TOMM40
TRIOBP
SP2
TP53BP1
ZNF682
LONP1
CATSPERD
ADAMTSL2
DPP9
WDR74
STRA6
OSBPL6
OAF
CDK12
SURF6
NBN
GTPBP10
CDIPT
LOC100289561
CENPA
CNOT1
STX6
VPS45
YIPF4
TMEM35B
HP1BP3
SARS1
DAB2IP
SELENOW
HIC2
TRIM24
SEC14L1
RSPH9
PHF12
FAAP24
CEP89
SUPT7L
SLC4A1AP
BDNF
CRYBG3
SLC35A3
TMEM79
SMG5
AMOT
GNA12
RFT1
MAP2K4
INTS5
TPD52
ZNF548
JMJD1C
RTRAF
TMEM231
TTC31
CCDC142
GRIK4
MVB12A
ZNF773
ZBTB3
PSMD8
MIR1-1HG
LDLRAP1
HIKESHI
CRYM
CCDC86
BICDL2
SLC44A3
HPS3
SUGT1
MSRB2
GSK3A
ITM2B
UBP1
PCNX4
BCL2L10
NT5C2
WDR89
CUX2
ZNF317
H2BC6
STK11IP
TNRC6B
BAZ1B
ZNHIT1
RBMS2
PLOD3
DUT
HAGH
FAHD1
PCBD1
SLC39A9
ERH
MBNL1
DAPK1
PTPRR
MYH15
HIBADH
HEPHL1
H2BU1
H2AW
NEURL1
SLX4IP
MAST4
SLC37A3
ZNF251
TFAP2B
ARHGAP24
RPRD2
PPIL1
C6orf89
SETD9
PRCC
ST8SIA3
PCBP3
MIOS
KCNJ3
TPCN1
TFAP2A
IRF2BPL
SHD
SYT15
USP54
MTFP1
EPHX1
TYK2
POP5
HNRNPUL1
MATR3
RBL2
RAB11A
C5orf63
ZNF687
SIKE1
GPR151
DEGS2
TMEM101
PRKCSH
CCDC151
WDR91
PRICKLE1
SNX17
EIF2B4
RAB5B
ZNF738
COQ7
BRD3
BOK
PIGM
FILIP1
TMBIM6
SDE2
TOMM70
LNP1
ZSWIM3
ACOT8
MYL6
MED25
FUZ
TAMALIN
ERGIC2
POLR2J3
ID2
LMAN1L
PRRT4
EYS
ZFHX4
RAD52
SYMPK
RGS10
NSUN3
FOXA3
EPHA6
DHFR2
CYB561
PGM2
ATP2B4
ZNF225
NCS1
ZNF264
DPYSL2
WNT5A
SLC41A2
KRT13
TSPAN8
RBM28
BANP
VEZF1
DLC1
LCN6
MRPS23
TVP23C
MMACHC
CCDC163
ZKSCAN4
TANC1
PTP4A3
PAN2
KRT20
FNDC3A
FAM222B
CAVIN4
PXYLP1
TM9SF4
NDUFB3
FAM126B
SEC22B
TAF5
NAA16
WBP1L
OR5K2
SMIM30
MTRF1
LUC7L3
FNBP4
FAM120AOS
FAM120A
DESI2
UBL4B
COL5A2
ZCCHC8
YJU2
ATP5MC2
GALNT14
ZNF423
U2AF2
THADA
PTPRO
IPMK
CISD1
BAIAP2
GLE1
YARS2
TMEM107
RPL23
RBM19
PIK3CA
KLHL25
ETV5
TRAF3IP3
P2RY6
PLXNB2
LBR
OSBPL9
SUFU
ACTR1A
VPS29
RAD9B
ASPM
ZNF627
TAS2R13
STARD9
P2RY12