ChIP-Atlas: Target genes

Potential target genes for RTF1

Query protein: RTF1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11380123 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RTF1's Target genes

◢ RTF1: Average

◢ SRX13834116: DLD-1

◢ SRX13834129: DLD-1

◢ SRX15147195: DLD-1

◢ SRX15147196: DLD-1

◢ SRX15147197: DLD-1

◢ SRX15147198: DLD-1

◢ SRX11380120: LNCAP

◢ SRX11380121: LNCAP

◢ SRX11380122: LNCAP

◣ SRX11380123: LNCAP

◢ RTF1: STRING

FRG2C
MTRNR2L1
DUX4
FRG2
COL23A1
UGT1A3
CDH11
H3C15
H3C14
H2AC19
H2AC18
H4C11
H3C13
H2BC18
LOC105378979
H2BU1
H2AW
H2BC5
H1-4
H4C12
DLG2
IFIT3
H4C15
H4C14
H1-2
H4C2
H3C2
H2AC4
H2BC21
H2AC21
H2AC20
H3C10
H2BC14
H2BC13
H2AC14
H2AC13
UCKL1
FAM240C
H2BC11
H2AC11
LRRC6
EEF1A1
GDF15
H3C4
H2BC7
H2AC7
IER3
FLOT1
FBXW4
H4C7
H3C7
H2BC9
PANK1
H2BC15
H2AC15
LEMD2
CALM2
C1orf159
SFN
TMSB10
H4C5
H3C12
H2BC17
H2AC17
UBC
DDIT4
PMF1-BGLAP
PMF1
PAN3
H2AX
H4C9
HTT
H4C1
H3C1
H1-1
RPL22
MRPL28
WDR43
H1-3
WAPL
TNFRSF6B
ATXN2L
TM9SF3
UBE2J2
H4C3
H1-6
PTP4A1
PRDM5
YRDC
C1orf122
RDH14
OGA
WDR4
LEMD3
EXOSC10
TLE4
STK40
H2BC12
H2AC12
NUTM2E
RHOB
PABPC1
AP3D1
HNRNPM
ZCCHC3
ZNF362
GALE
TIAL1
ERRFI1
IREB2
PWWP2A
NUP62
IL4I1
ATF5
TARDBP
SPG11
TMEM87B
RCC2
PDXDC1
GADD45B
KHDRBS1
RNF34
REEP4
AMD1
RNPEP
LOC100289561
EIF4E
ACTB
FANK1
DNAJC11
ETAA1
HSCB
CHEK2
PALD1
LRRC47
SFPQ
ICMT
YTHDF1
BBC3
WASF2
HEXIM1
ZNF367
RCC1
PAXBP1
PABPC4
RC3H2
NABP1
AJUBA
KDSR
JUNB
ADCK2
ABRAXAS2
WSB1
TNKS2
PPA1
NFYB
RCN1
PARD3B
GAPDH
ANP32E
BRPF3
TNKS
PINK1
HNRNPU
CLTA
RRP7A
POR
FEM1A
MICOS10-NBL1
MICOS10
HPS1
AMMECR1L
UHRF2
HSPA1L
HSPA1A
FAM120C
POMT2
GSTZ1
FH
RNF220
PDCD6
EIF3A
DUSP16
TSC22D1
CCAR1
POM121
SETD7
CDK8
CDK17
ATL2
PEX6
BTG1
ATMIN
PSKH1
ATXN1
SFT2D3
DYRK1A
ACTRT3
ZC3H12C
RPAIN
NUP88
STX10
MAP3K2
IER2
SSU72
ZC3H6
TUBA1C
EPCAM
HSPA4
ADO
SF1
LRCH1
FABP5
SOCS1
INTS6
AXIN2
RPL11
RABL6
LOC100287896
LIPT2
BOD1
MRPS18B
PLCB4
IVNS1ABP
CCDC200
RRAS2
RAB43
TOP2B
MTX2
H4C4
H2BC6
RBM17
EIF3B
RIC8A
BET1L
ZFYVE27
RBM15B
METTL8
DCAF17
FOS
RIOX1
SCMH1
ROCK2
PGS1
KIAA0232
ATP1B3
TAX1BP1
PAM16
CLDN4
RNF213
PPP1R26
C19orf48
TAF5
STRN3
SLF2
H3-3B
DUS1L
CLSPN
AP4S1
XPNPEP1
TRMT1
NF2
NACC1
LHX4
GRK5
FBXO9
CILK1
STRN4
PSMD11
PPM1B
MT1E
FKRP
MFSD14B
ATAD3A
NDUFA6
ID1
HIPK3
SRBD1
LMNB1
FBXO34
NCOA2
MAP11
GHITM
EIF4G3
EHBP1
RDH11
HPS6
CRLS1
SPTSSB
USP24
UBE2R2
SPRED2
RMI2
EIF5A
DLG5
ASF1A
SLC1A5
MTFR1L
ZBTB2
PROB1
PLK2
MZB1
JMJD1C
INPPL1
CCNJ
TINAGL1
TCERG1
MTFMT
MCMBP
LRP8
PET117
PDCD7
NR2C2
N4BP2
LRPPRC
KAT14
CAPNS1
ZNF746
YLPM1
NT5C
MAN1A2
IPPK
UBTD1
REEP3
MMS19
HSF1
COP1
BOP1
UHRF1BP1
SMURF1
RPN1
PSMD3
SIRT4
RNF10
PFN2
MYO5C
MTA3
LONRF1
H6PD
FAM136A
AGFG1
SEPHS2
GLG1
CDC42BPB
AHDC1
UBE2G1
EIF1
BIRC6
AZIN1
H3C11
H1-5
AMPD3
WHAMM
UBXN4
PPP3R1
NUDT19
FSD2
UBE2Z
SCAF8
KCNAB2
EPS15
E2F3
SAP130
PPRC1
OARD1
NFYA
GPR137
EDEM1
BRD7
BAD
ZNF398
TRIM4
RUVBL1
EEFSEC
SPCS3
EID2
CTDSPL
CLDN7
C10orf95
YAP1
TMX4
SARAF
PTOV1
MTIF3
MAML1
FADD
DDI2
GTF2I
GMPS
FBXL17
AGO2
PTPN23
FYN
BCL2L13
MFHAS1
HES4
GADD45G
FIBP
CCDC85B
ZFP41
DUSP28
ANKMY1
POGLUT3
LOC100421372
HSPA14
CDNF
SLC25A38
SETD6
SET
INO80D
GABPB1
WASL
TXNDC5
SPAG8
NUP54
NFU1
HINT2
SP3
KAT7
ITPRIPL2
ATE1
ZNF487
UBE2V2
TGFA
SHB
NPEPPS
NDST2
NBL1
ATP6V0E2
ZFP91
ZCWPW1
ST7
PCGF6
PAIP1
MEPCE
LPXN
CRPPA
STRIP1
LSM14A
TRIB3
MCPH1
LACC1
FAM86B2
CCDC122
AHCY
SLC35E2B
ODF2
LYSMD2
GMEB1
SELENOW
MT2A
MAPKAPK5
KMT5A
CSNK1G2
ADNP2
SULT1A4
SULT1A3
SLX1B
SLX1A
SKI
SCAF4
KIF1B
GSPT1
BOLA2B
BOLA2-SMG1P6
BOLA2
VAPA
UNC119B
SLC39A10
PIGM
KIAA2013
C8orf37
ZNF101
UQCRFS1
PTBP3
DGKH
ATP13A1
ZNF518A
SYNCRIP
SCRN1
ALDH18A1
TMEM260
LTBP1
KLHL36
CSRNP2
COPRS
AVEN
TLE5
SORT1
SNTB1
PDP1
FEZ2
ZNF3
TIMM13
SLC25A13
PGK1
NUDC
MAN1B1
ATOX1
TMEM116
SPPL3
SLC35E2A
SIRT3
PSMD13
NBPF1
HECTD2
FBXO11
ERP29
CUL5
TUBB4B
TASOR
SLC25A6
SIN3A
POLR2J
MACROH2A1
FAM166A
YIPF4
TRERF1
SRCAP
SMIM10L1
RAB1B
PRH1-TAS2R14
PPIA
LOC730183
HLA-E
DENND10
DDAH1
CRIM1
CCN1
C12orf66
ATG4D
HSPB1
CCDC116
AKIRIN1
SPG7
SFRP4
RSRP1
EPDR1
CDK2AP1
ZNF800
UBE2L3
TAOK1
SMAD1
PPP6R3
LIG3
UHMK1
SPR
PCNX2
MFSD6
CYC1
CCDC71
AK2
ACAP2
ZNF598
TMEM9B
TMBIM6
TCF7L2
SIMC1
RASA2
RAB11B
PKD2
PHF3
MRPS35
GTF2A1
GRK2
ZCCHC7
VAMP3
UTP18
RNF13
NT5M
MBTD1
FBXO42
EMSY
EIF2S2
DIP2B
CREM
CLSTN1
UBE3A
TALDO1
SGF29
PRNP
MSANTD2
IL17RB
HOMER1
H2BS1
FGFBP3
CPT2
CHDH
C6orf62
XPO6
TUBGCP5
SOX4
RFX1
PTMS
OGFR
MND1
JOSD1
GTPBP1
ZBTB4
UBE3C
SLC35G6
RDX
POLR2A
PGAM1
PFKL
KLF6
ID2
DCAF10
DAZAP2
ZNF143
TPD52L2
RNF19B
PTCH1
OTUD3
LUC7L2
IDNK
DENND4B
DENND2B
D2HGDH
BLOC1S4
ABHD16B
ZBTB8A
USP19
UBE2N
RB1CC1
POLR3D
PI4K2A
NOL11
C14orf119
ACIN1
TRAPPC8
SPATA5L1
SIRT1
POC1A
PHLDA2
MROH1
IER5L
GCC1
GATM
FSCN3
FAM86B1
EIF4H
DR1
CCSER1
ARF5
ZNF337
ZBTB14
WDTC1
UBALD1
PKD1
MIER3
MIEF1
ILKAP
HIVEP2
CAST
ARID1A
AFF1
RNF207
POMZP3
MFSD14C
MAMDC2
KLF10
ILF3
HNRNPLL
HGH1
DNAJC10
CHURC1-FNTB
CHURC1
ZBTB39
TRAFD1
TAMM41
RNF169
RGS10
PGM1
KLF7
KDELR2
FUCA2
FOXJ2
FAM160B1
BAG3
TBC1D12
STMN1
RSF1
RGPD8
RGPD6
RGPD5
PPP1R9A
PIAS4
PDZD8
NMD3
KRT19
CSGALNACT2
CHPF2
APOLD1
AAMDC
TIGD6
SBNO2
RER1
PLEKHN1
MORN1
HSBP1
HMGXB3
SUV39H2
SRPK1
PSMC1
GATAD1
CASP3
ZNF263
VPS13D
TSPAN10
RND3
NPLOC4
KDELR1
IGF2R
GRIN2D
GLO1
GADD45A
C16orf72
APTX
ACOT7
TUBA1B
TTC13
SRF
SLMAP
COLGALT1
CLASP2
CBWD5
BMPR1A
TMEM181
STMP1
SLC25A3
SDF4
RUNDC1
RITA1
PTGES3L-AARSD1
PTGES3L
PCYT1A
NDUFV3
NARF
MRPS2
ETF1
DDX54
C9orf116
B3GALT6
TRAP1
TECPR2
TCOF1
SLC6A9
RUFY3
NSMCE4A
NHLRC2
MAFG
INKA2
HSPH1
H4-16
H2AJ
DDX20
DCLRE1A
CINP
TMEM131
SYNGR4
SIN3B
RAB23
PCIF1
ORAI1
MFAP3L
MCM9
JUND
IL4R
H2AB3
H2AB2
H2AB1
FBXL5
F8A3
F8A2
F8A1
DARS1
ZNF652
UBN1
PGLS
PARP8
NUDT18
NEK9
MKLN1
GRHL2
GLYR1
CIRBP
ZMYND11
XPO7
TBK1
SUGP2
SPEN
PLXNB2
NUDT2
MOV10
KIF24
DHPS
BRD3
ARMC6
ARFGEF1
ZNF638
SCAND1
RNF114
RAD23B
PRRC2C
PCOTH
OTUD4
MIPEP
LTO1
LRP2BP
JAGN1
ELAC1
DNAJA2
ATIC
ANKRD37
ACBD3
YTHDF2
USP22
TOM1
SMAD5
SFXN1
PPP2R2D
PKN1
NFATC2IP
MARVELD2
IRF5
EIF4A1
CNIH4
BPNT2
ATR
ABRACL
XRN2
TEX264
PTPN9
MYO10
IDE
HIP1R
GALK2
CSKMT
COPS2
CBWD3
C11orf98
AEBP2
TEKT2
TAS1R1
SIPA1L1
SEPTIN8
NOL9
METTL9
MARVELD1
LSM14B
KIF5A
HINT1
DCTN2
CUL1
ARHGEF17
ADPRS
WNK1
TSPAN14
THOC7
SRSF6
SAMD4A
RP9
PPP6R2
PFDN4
MGRN1
LRRC37A3
IRF2BP2
GLCCI1
EPC1
CEP68
ATXN7
VWA8
TMEM51
SYMPK
SLC7A1
PRR30
PREB
POLR2J3
PGAP2
NUP205
ME1
HNRNPA0
GORASP2
FOXA3
FBRS
ZC3H13
UBE2B
RAB28
PPP4R3A
PCM1
NRBF2
KHSRP
IFIT5
CDKL3
ZNF195
VPS29
UROS
UBE2Q2
UBE2D1
RBBP6
RAD9B
NFAT5
FOXK2
FAM53C
CDC25C
BCCIP
ANKRD13C
ACTN1
ZNF503
ZC3H7B
WBP4
TOP3B
RANGAP1
PUSL1
PTDSS2
PRR12
PRMT6
PPP1R8
NAA25
N4BP2L2
MARVELD3
KDF1
KCTD15
HMGCL
EXPH5
ELF1
ATXN10
APLP2
ACAP3
VCL
UACA
TSPYL1
SNX19
SMAD4
SLK
SEC24B
RNF19A
MIB2
GATA6
FUT4
FAM169A
DSE
BSDC1
BIK
AP1G1
ACTR1B
ZFR
XPO1
UHRF1BP1L
TRIM27
ST20-MTHFS
SLC25A24
RNF126
PRRT2
PNRC1
PAIP2
PAGR1
MVP
MRPL19
IPMK
HDLBP
HASPIN
GLCE
GAN
DNAJA1
CISD1
ZMYND12
PPCS
PHLPP2
PFKP
NIPAL2
NCOR2
MAP2K4
KMT2A
KAT6A
FEM1B
COX5B
CCDC30
ANKRD36B
VRK1
USF1
TMPO
SPATA5
SAAL1
RARS1
PPP2R3B
PLEKHA1
NUDT6
MORF4L1
MAP3K20
ITSN2
HABP4
GGPS1
FDX1
EPN1
CUEDC2
CSNK2A2
CSNK1D
C1QTNF6