ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
MTRNR2L1
RGPD2
RGPD1
MTRNR2L10
EMILIN2
METTL15
KIF18A
IDH3B
MTRNR2L2
MSH3
DHFR
CCDC59
NAGPA
MTRNR2L8
RBM19
SUMF1
NGDN
TRMT1
NACC1
ATG14
MRM3
GLOD4
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
ISY1-RAB43
ISY1
GATB
CDC23
MTRNR2L6
VPS50
HEPACAM2
MRPS18C
HELQ
GPATCH3
MRPL39
PPWD1
CENPK
TSR3
GNPTG
MAMDC2
ZFYVE26
RAD51B
UBE3B
COPS7B
SMG8
RBM48
PEX1
ZNF165
GTF3C5
EIF2D
SPNS1
MRPL1
SFSWAP
C8orf33
RTTN
LMAN2
COMMD9
KRR1
WASHC2A
RANBP6
GET3
ZC3HC1
MED24
NDUFAF2
ERCC8
COL23A1
ERAL1
PHF5A
ACO2
MED6
SSNA1
ANAPC2
TMEM41A
TMEM199
POLDIP2
WDR18
POLR3F
DZANK1
MRPL44
NOC2L
KLHL17
SREK1IP1
CWC27
TRAPPC2L
GALNS
NCAPH2
LMF2
BRIX1
PSMB7
SUPT7L
SLC4A1AP
INTU
TCTN2
CNOT3
TRIP4
PUS10
PEX13
TOMM22
NDUFS3
KBTBD4
TFPT
PRPF31
XAB2
PCP2
DNTTIP2
EIF3H
ALG1
BSDC1
PPT1
TIMM22
C16orf91
POLR1F
VIRMA
NDUFS7
TOMM6
MRPS15
ZNRD2
FAM89B
MTIF2
PEPD
RNF26
FEM1A
SAP30BP
RECQL5
CWF19L1
CSPP1
COPS5
URM1
PDCD6IP
LARS2
FBXL12
RBM42
MRPS14
FAM162A
CCDC58
NUP214
USHBP1
BABAM1
UQCC1
MRPL45
EIF1AD
BANF1
RRP15
NOL8
CENPP
MRPL55
TMEM208
LRRC29
RPTOR
SETD3
CCNK
FASTKD2
PEX19
TMEM101
EIF3F
CRBN
TEKT2
ADPRS
TAF3
BBS1
TSR1
SGSM2
ZMAT2
HBS1L
DBT
LIN52
ALDH6A1
TMEM126B
DLG2
TPRN
TMEM203
NDOR1
PFDN1
MTBP
MRPL13
NPM3
FGF8
PMPCA
ENTR1
UBIAD1
WASHC2C
NSFL1C
HEXA
NUP160
DNAJC30
BUD23
NMNAT1
LZIC
TIMM17A
TRIAP1
MKS1
VPS11
BRF2
TXN2
GPATCH4
SF3B2
GAL3ST3
MRPS11
MRPL46
SF3B3
COG4
SLC39A4
CPSF1
RCE1
MYL5
ATP5ME
RTN4IP1
QRSL1
TRMO
DDX23
YIPF2
TIMM29
MRPS22
SPRYD4
MRPL21
IGHMBP2
SENP1
PFKM
COX10
HNRNPA1L2
NOL11
IPO11
MOCS3
DPM1
CEP20
COX16
C5orf51
PSMC3
NMT1
DCAKD
ATP5MF-PTCD1
ATP5MF
MRTO4
EMC1
ZNF213
METTL16
COMMD4
MRPL2
KLC4
QRICH1
MRPS31
TAS1R1
NOL9
PISD
C12orf43
KAT8
PIGL
NCOR1
DUX4
UTP20
TRMT61B
NUP54
KCTD5
TACO1
C17orf75
SPATA25
NEURL2
CTSA
WDR74
RBX1
LONP1
CATSPERD
SUGCT
MPLKIP
ATP5IF1
PELP1
MFN2
TOP3A
SMCR8
ZFAND2A
RABL3
GTF2E1
VPS33A
TEFM
ZSCAN22
NCAPD2
MRPL51
ARFGAP2
RDH5
ITGA7
BLOC1S1
ZNF17
OSCAR
NDUFA3
RPUSD4
FAM118B
NDUFAF1
UHMK1
OXNAD1
DPH3
MRPL58
THUMPD1
HSPBP1
BRSK1
VCPKMT
ZBTB45
SLC25A53
OS9
ATP7B
ALG11
GRWD1
OPA1
OAZ3
MRPL9
XPO4
CDK5RAP1
TAF2
OR2T1
DNAJC11
TATDN3
NSL1
MZT2A
TPP1
ERICH4
DMAC2
STX18
MRPL48
VPS25
LIN7C
POLR1H
SPATA20
MNAT1
TNPO3
LAMP1
VAC14
ABT1
ANKRD13C
PPP1R7
PASK
WDR24
KDM4D
CWC15
DNAJB12
RNF6
ERGIC2
ZZZ3
TJAP1
RNASEK
C17orf49
TMX2
MED19
WDR48
SCN11A
USP54
EIF3E
ALKBH3
COPS8
MPHOSPH10
MCEE
TSN
AURKAIP1
SLC7A6OS
PRMT7
TIMM21
FBXO15
POLR2K
FBXO43
SYF2
MED23
SLC35A3
HMGCL
DUS2
DDX28
DIABLO
MRPS10
TM9SF4
USP30
NOC4L
DDX51
NGB
ZDHHC6
VTI1A
TRMT44
ACOX3
STX16
CSTF2
TBRG4
ZMPSTE24
SEC16A
C9orf163
ZNF770
SUPV3L1
PHB2
WDR53
FBXO45
XPC
LSM3
ZNF2
DOHH
RPS28
NDUFA7
TAF11
ANKS1A
KLF1
GCDH
ARMC8
HAX1
DDX46
ZKSCAN4
WDR83OS
WDR83
MAN2B1
NDUFB5
MRPL47
FDX2
USP8
SLC35B1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SLC25A26
SYNGAP1
CUTA
SMPD4
MZT2B
ZC3H18
FAM187A
EFTUD2
CCDC103
NDUFV1
NDUFA10
WDR36
RFXANK
BORCS8
SART3
ISCU
EXOSC3
MTO1
EEF1E1
SNRPC
KLHDC4
SRPRA
APTX
CCDC43
LSM5
AVL9
TUFM
SH2B1
CCAR2
C8orf58
ZCCHC4
FANCD2
YBEY
MCM3AP
CDKAL1
NUF2
RPUSD2
CCDC32
LRRC8A
KYAT1
TRUB1
STOML2
PTPN21
TAX1BP3
EMC6
METTL2A
PUM3
NUP155
GTF3C3
MTRNR2L3
GOLGA3
RANBP3
NDUFA9
AKAP3
UQCRC1
UBL5
MTMR4
MAP3K7
MCOLN1
TBC1D22A
MRPS17
C1orf198
ZNF205
TYW1B
ZBTB8OS
RBBP4
GTF2H3
EIF2B1
ZSCAN30
RPS7
TBC1D17
AKT1S1
DPP9
PEX3
ADAT2
ZDHHC16
EXOSC1
ZKSCAN8
CCDC97
C12orf73
UBXN11
PIGK
NDUFAB1
UBN1
GLYR1
AP3S2
NFKBIL1
ATP6V1G2
DDX39B
EMC4
SLIRP
ALKBH1
SF3A3
FRG2
ARFGEF2
ZNF461
MED4
PHAX
MRPL35
IMMT
ACIN1
SELENOH
COMMD2
GBA
WDR11
TSR2
SDHC
MPZ
AP5Z1
TERF2IP
KARS1
NOP16
HIGD2A
MED27
NCSTN
COPA
PWP1
MAPKAPK5
L3MBTL2
CXorf56
FAM32A
ZNF408
ARHGAP1
ZNF383
MED9
ZBTB11
NSUN4
IQCH
AAGAB
MRPS7
GGA3
AP1G1
PTCD2
MRPS27
TRDMT1
SH3YL1
ACP1
AP3S1
STMN3
RTEL1
NXT2
MTOR
CWC25
THBS3
MTX1
POLR2J2
TMEM126A
GCN1
TMEM230
GOSR1
SMG7
MRPL53
TOP3B
ZNF561
UMPS
ASH2L
SSBP1
PCID2
CUL4A
HIRIP3
ELP5
CTDNEP1
SPTLC1
TTC31
CCDC142
GPATCH1
YIPF3
POLR1C
UQCRB
ATAD3B
SPC25
PTCD3
POLR1A
MRPL20
NUP107
MRPL4
TEPSIN
NDUFAF8
PSMB2
MED18
TMEM128
SEC13
PRPF38A
ORC1
WDR4
MED25
FUZ
SDE2
METTL1
EEF1AKMT3
CYP27B1
DCP1A
NSA2
GFM2
DUS4L-BCAP29
DUS4L
COG5
YY1
VPS52
RPS18
OSBPL9
REXO4
ADAMTS13
FAM149B1
ECD
SMU1
ITGB3BP
EFCAB7
MRPL3
MRPS18A
IMMP1L
ELP4
ANAPC5
SF3B6
FAM228B
GTF2H4
TBC1D23
CEP162
ALG10
NME3
MRPS34
EME2
SLC33A1
TMEM217
TBC1D22B
MFSD5
TBC1D19
SCAF11
LYRM4
FARS2
TMEM183A
ATP6V1C1
MAGOHB
FAM104B
ZNF79
SEC11A
PSME3
ITGB1BP1
CPSF3
GRPEL2
WASHC5
NSMCE2
POMZP3
SNRPD3
GUCD1
DHX40
TIMM44
ABRAXAS2
CSTF2T
MRPS35
MIA3
PEX14
DFFA
FRA10AC1
EXOSC9
ANKFY1
ANAPC1
NOB1
GTPBP10
ZNF195
PSMC4
GPN1
CCDC121
ATXN7L1
DNAJA3
SRRD
HPS4
ZNHIT2
FAU
PCNP
NUFIP1
GPALPP1
MRPS23
RNF166
CTU2
SF3B5
FAF2
RUVBL1
EEFSEC
PHF23
DVL2
MDP1
CHMP4A
ZNF497
TM2D1
ANAPC11
ALYREF
SPDL1
AQR
CMTR1
ZCCHC10
NDUFA5
NOL10
NR1H3
ACP2
VAMP3
METTL14
MFSD1
PNPT1
SSU72
ZNF721
PIGG
INTS9
HMBOX1
TTC26
RPAIN
NUP88
NELFA
MAGOH
FCF1
AREL1
DDX19A
SAP18
RAB3GAP1
MYSM1
SDHAF2
CPSF7
MTRF1
TBCC
BICRAL
RAD54L2
CHM
NOLC1
IPPK
BHLHB9
SPAAR
CACTIN
HIF1AN
UBE2L3
ZNF581
ZNF580
CCDC106
NOL12
PRR3
GNL1
DHDDS
EIF4B
WBP1
INO80B
ZNF614
NDUFC2-KCTD14
NDUFC2
ATP6V1G1
RPL9
LIAS
SDR39U1
VPS41
MYNN
ACTRT3
C6orf89
PPIL1
ZWINT
OTUD6B
DNAJC25-GNG10
DNAJC25
ZNF501
OTUB1
DDT
MRPL37
CYB5RL
GID4
ATPAF2
DDTL
PPIL3
NIF3L1
NUDT5
CDC123
RBBP5
ZNF839
MED28
NDUFAF5
ESF1
FKBPL
ATF6B
OSGEPL1
DNAJC13
STK36
RNF25
MAZ
METTL2B
NME1-NME2
NME1
OSGIN1
TBL3
NDUFS4
THAP10
LRRC49
KLHL7
VPS35L
RBM28
B4GALT7
TMEM237
NFX1
EIF4G2
TOR1AIP1
TOR1AIP2
RBM23
PRKRIP1
TFIP11
RMDN3
MRPS18B
ZNF292
ILF3
NDUFB3
FAM126B
BORCS7
DDX49
COPE
THOC1
ZNF594
LCMT1
RSL24D1
YJU2
JRK
RNASEH1
MED21
DOLPP1
CLPTM1
ARMC1
RPP30
GPAM
MITD1
TFB2M
CNST
TBC1D30
GNS
NOXA1
TMA16
UBE2L6
TSFM
UTP15
ANKRA2
SDHB
PAF1
TBC1D15
SEC24C
FAM227B
DTWD1
CCDC57
TBCK
AIMP1
COQ3
NKAP
THBS4
MTX3
ATRIP
DDX47
ZNF426
GRN
FAM207A
COPS4
POLR3B
MAN2C1
AASDH
PPAN-P2RY11
PPAN
ANGPTL6
ZSCAN9
LEMD3
SPC24
TIMM50
BMS1
UBN2
GOSR2
ALG10B
CENPW
NCBP2AS2
NCBP2
NDUFB6
RBPJ
SERP1
EIF2A
VPS37A
CNOT7
MRPL27
EME1
TUT1
ZNF3
HTRA2
DQX1
PSMB6
NAT10
SIRT3
PSMD13
WDR25
WARS1
WDR97
MAF1
TRAPPC4
RPS25
NUP133
ZNF507
TCERG1
UBA5
ACAD11
TBCCD1
DNAJB11
PSMC2
DNAJC2
RUVBL2
GYS1
RPL23A
RAB34
PLAA
IFT74
GATAD1
ZSWIM8
CHCHD1
COQ5
NARS1
RPAP1
KIF22
DPP8
HSD17B10
ANAPC10
ABCE1
AHCY
DCTN6
ZNF875
POLR2J3
BNIP1
TRIM23
TRAPPC13
SHLD3
MESD
DMAP1
LTN1
IKZF2
FBXW9
INTS12
GSTCD
BRCA1
PFDN4
ANTKMT
RNF181
CCDC137
SDHD
BLOC1S6
SEC22B
WDR20
HSP90AA1
RPL37
CRYAA2
CRYAA
BRMS1
B4GAT1
YARS2
MALSU1
TRAPPC8
MFSD8
ABHD18
ZNF579
ZNF304
ZSWIM1
ZNF181
METTL17
PINX1
GID8
DIDO1
ZBED5
PPIG
VTA1
NMBR
SAMD10
PRPF6
STK16
GLB1L
MRPL22
GEMIN5
EXOSC5
BCKDHA
TDG
USE1
MICU2
IVD
C1D
ATP6V0D1
AGRP
PSD
FBXL15
IARS1
MTMR9
COPZ1
TYW1