ChIP-Atlas: Target genes

Potential target genes for CBX3

Query protein: CBX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190214 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CBX3's Target genes

◢ CBX3: Average

◢ SRX3010075: GM12878

◢ SRX3010076: GM12878

◢ SRX055346: HCT 116

◢ SRX055348: HCT 116

◢ SRX055353: HCT 116

◢ SRX055354: HCT 116

◢ SRX130495: HCT 116

◢ SRX130496: HCT 116

◣ SRX190214: HCT 116

◢ SRX8512748: HCT 116

◢ SRX3010018: hESC H1

◢ SRX3010019: hESC H1

◢ SRX116427: K-562

◢ SRX186764: K-562

◢ SRX190188: K-562

◢ SRX13327955: LNCAP

◢ SRX13327956: LNCAP

◢ SRX13327964: LNCAP

◢ SRX13327965: LNCAP

◢ SRX18378472: LP-1

◢ SRX13327957: MCF-7

◢ SRX13327958: MCF-7

◢ SRX13327959: MCF-7

◢ SRX13327960: MCF-7

◢ SRX13327961: MCF-7

◢ SRX13327962: MCF-7

◢ SRX13327963: MCF-7

◢ SRX13327966: MCF-7

◢ SRX13327967: MCF-7

◢ SRX13327974: MCF-7

◢ SRX13327975: MCF-7

◢ SRX13327976: MCF-7

◢ SRX13327977: MCF-7

◢ SRX13327991: MCF-7

◢ SRX13327992: MCF-7

◢ SRX13327993: MCF-7

◢ SRX13327994: MCF-7

◢ SRX13327995: MCF-7

◢ SRX13327996: MCF-7

◢ SRX6712570: MCF-7

◢ SRX6712571: MCF-7

◢ SRX6712572: MCF-7

◢ SRX6712573: MCF-7

◢ SRX822009: T-47D

◢ SRX822010: T-47D

◢ CBX3: STRING

RFC1
INTS12
GSTCD
UTP11
WDR36
LEMD3
TACO1
NUF2
PIK3R3
MRPL44
HTR5A
STX16
WDR11
TRIP4
SSBP1
FRA10AC1
KDM3B
RNF130
TRUB1
DMAP1
DCP1A
GTF3C3
DHX40
VPS29
RAD9B
MRPS18C
HELQ
SF3A3
NME1-NME2
NME1
TEX46
KDM1A
PEX3
ADAT2
NPAS4
CDC16
UCHL5
RO60
RPS7
MTF2
LRRC59
SMG8
CDK5RAP1
ALG10B
C10orf88
MNAT1
OPA1
DSTYK
SAR1B
VTA1
NMBR
SLC37A4
KANSL3
FER1L5
COX16
USP30
ZCCHC7
HIF1AN
MED23
DNAJC25-GNG10
DNAJC25
SDHAF3
BBS1
TBC1D19
NDUFA12
EIF2B3
TAMM41
TATDN3
NSL1
CCNC
ABCA3
HMGB1
USPL1
RPL37
DEGS2
RPA2
RAD54L2
CLUAP1
C16orf90
IKZF5
ACADSB
ABLIM3
NDUFS3
KBTBD4
TMEM242
DRG2
FMNL3
FLACC1
HELZ
MRPS23
PLEKHM3
COMMD2
SEC22B
RBBP5
LAMTOR5
FOXJ3
CCDC59
SLC33A1
SELENOH
NOC3L
TMEM41A
STX18
HLTF
C17orf75
SLC24A1
INTS14
AATF
AIP
CWC25
SNAP47
JMJD4
NDUFC2-KCTD14
NDUFC2
FAM228B
SF3B6
MITD1
DFFB
CEP104
CEP350
TSFM
PPP6C
TTC4
ITGB3BP
EFCAB7
AP3S2
CCDC88A
DCAF10
MTRNR2L2
MSH3
DHFR
CDIP1
MTOR
BSDC1
GFM1
BNIP1
NECAP2
RPL5
GTF2H2
GTF2H2C_2
INTS5
FANCD2
DPY19L4
PCP2
STXBP2
UTP3
NUP54
PLEK
ZNF212
NDUFAF5
ESF1
CTNNB1
C11orf49
C8orf33
RABGAP1
SRFBP1
DDX18
MFF
TTC26
R3HCC1
RPL38
ANKRD46
FAM133B
TRMT61B
EXD2
GGACT
DUS1L
TCERG1
MTERF1
ZBTB40
TOP3B
PAFAH2
BMS1
FAM227B
DTWD1
NDUFAF1
LSG1
SRRM3
LARP1
CCAR2
C8orf58
TUT1
NOC4L
DDX51
SLC30A6
MRPL21
IGHMBP2
WASHC2C
IPO4
DHX8
KIF15
KIAA1143
KLHL20
GOSR1
XKR9
LACTB2
EIF2D
ZMPSTE24
FXN
AAR2
UBOX5
FASTKD5
C12orf73
SLC44A1
CWF19L1
SLC35B1
DUS2
DDX28
NOL11
TRIAP1
CC2D1A
C19orf57
ALLC
WDR24
ZCWPW1
MEPCE
ALG10
CSRNP1
RINT1
MTIF2
KRR1
TSPAN10
NPLOC4
PBX3
PDE11A
RBM45
WDR70
ZFYVE27
SLC1A7
USH1G
OTOP2
AGK
METTL15
KIF18A
PPIP5K2
GIN1
LRRC37A3
PSCA
MFAP3L
CCDC86
SCNM1
LYSMD1
WASHC5
NSMCE2
MRPL16
CCDC174
SECISBP2L
RBSN
IRGM
DNAJC11
ZNF791
ZNF490
JRK
ZNF579
NOL7
FRG1
SLC39A3
TIMM22
NAT10
NR1H2
SAAL1
DHRS13
PPM1H
CCDC107
SPOCD1
C18orf21
CDKN2AIPNL
PARL
ANAPC5
NAF1
RNF216
GOT2
TVP23B
IPO11
NUP107
PBK
CRB1
RPP14
HTD2
GTF2H2C
CDC73
FAM135A
PNPLA7
ZSCAN22
TCFL5
CDH17
SEMA6A
INA
PAXBP1
ALKBH3
GPAM
SLC25A32
DCAF13
SRP68
GALR2
SCN5A
MRPS31
GALK2
COPS2
ZNF609
GPRC5C
THUMPD1
SLC25A51
DDX46
MRPL55
SPOP
LARS2
TMEM222
MAGOH
MOB4
ARL8B
RAB18
EIF3F
NLRX1
ATP5MC2
CDIPT
NOP16
HIGD2A
FGF1
CORO1C
ZNF572
ZNF280C
TCTN3
ATL3
RNF166
CTU2
SLC39A11
ANGEL1
VIRMA
RNF151
TBL3
SNRPB2
RUVBL1
ZC3HC1
TMEM68
TGS1
POLR3B
TAF1C
ADAD2
CCNL1
TAF5
PSMB7
SPSB1
CCDC126
ERLIN2
PRKCE
ZFR
RANBP2
ASB5
COIL
LSM12
G6PC3
TMEM79
SMG5
TMEM101
ZNF292
CYB5R4
NUP153
BORCS7
SMC3
ZNF721
PIGG
TBC1D13
PSMC2
DNAJC2
NMNAT1
LZIC
DNAJC19
PRRG2
NOSIP
TXNDC9
EIF5B
NCEH1
SPRYD7
STAT3
ZBED9
CENPW
RPS3A
TUBGCP3
PDIA5
INO80C
DNAJC24
DCDC1
ACAD9
ZNF205
M1AP
TATDN2
GBA
PNPT1
ATP5MC3
CYRIB
GORASP2
DYM
AQR
ANAPC11
ALYREF
COX7A2
C19orf53
LEMD2
LDAH
GTF2H3
EIF2B1
DDX41
SMIM12
TEFM
SDAD1
NUS1
GIP
PSMD3
MFSD4B
SLC35A3
ARL14EP
SRSF11
LRRC40
KAT7
ZNF286A
NR1H3
ACP2
TIGD6
HMGXB3
RPS14
EPRS1
HINT3
MRPS14
CUEDC2
TMEM115
RPS20
TCHP
BOD1L1
TIGD1
EIF4E2
CFAP20
COA3
CNTD1
MAGOHB
VPS25
PPY
API5
STEAP1B
TRIM59
RPS13
SEC13
LAMP1
RPL27
FASTKD1
FBXO43
RPS15
POLR2K
RANBP3
POLR2J3
YIPF2
TIMM29
MTMR9
UBXN6
FAM24A
TOR1AIP2
MYBPC3
TOR1AIP1
LTF
TPRKB
EEFSEC
RAG2
IFTAP
MRPL1
EBI3
DHDDS
RPL29
YJU2
NOP14
GRK4
ARHGEF12
SOD2
WTAP
ZSCAN30
SH3GL1
CHAF1A
EIF3E
EIF1AD
BANF1
AK2
ATR
ZNF3
RPTOR
TBPL1
TEKT2
ADPRS
KPNB1
SH3BGRL3
PRKACA
PSMD9
HPD
TMEM170A
OGFOD2
RARS1
LSM5
AVL9
PCBP2
C2CD5
AARS2
SLC9B1
TTC1
LRRC47
KDM3A
PMPCB
DPP8
FBXO38
NSA2
GFM2
MRPL22
GEMIN5
MCOLN1
RBM28
DUSP6
POLR1H
SNRPE
FZD1
SCAF11
PIGL
NCOR1
GTPBP10
ZNF165
UNG
ALKBH2
ASB6
HNRNPA1L2
AURKAIP1
TMEM107
PDCD6
CNNM2
TTI2
NOS3
FAF1
EIF3G
NSUN5
NUP214
MAPKAPK5
LOC112694756
MAP3K13
TFPT
PRPF31
MMUT
CENPQ
MMADHC
NUDCD1
RPL6
COPS8
PTPN11
STK25
GPR180
BICDL2
RTTN
MTHFD2L
WBP1
INO80B
KNL1
KCTD5
NEK3
C8orf37
UBE2Q1
C6orf89
PNPO
ABLIM1
TRAPPC9
PIKFYVE
BUB1B
RABEP1
PPIG
BUD13
POLR1F
MEST
MRPL12
COMMD9
C12orf43
B4GALT5
KIF1B
VPS33A
MAP3K7
PPP4R3B
RBM42
USP4
ETFDH
C4orf46
MIGA1
ZNF268
MRPS15
ZNF670
BRF2
CEP120
ADPRHL1
SEC14L1
CAAP1
MTRNR2L8
PTCD1
CPSF4
CASC3
EDC4
TSEN15
RRM1
SCAPER
AMHR2
THOP1
SGTA
TMEM167B
UTP23
THEM4
NDUFB7
ZNF280D
PDE12
NUP133
EIF4A3
PTPN4
EZH1
SPTLC1
DDX1
IQSEC3
WDR74
FNTB
STEAP2
ATXN2L
FBXO34
ARTN
AP4E1
ARPP19
ZNF696
EIF3B
DDX19A
SCAP
PKN2
TDG
PARK7
APOA1
STXBP3
RRP15
EXOSC9
NR2C1
SMARCD2
SOS1
SAMD4B
STXBP4
COX11
CUL2
NDUFAF6
LOC101928764
NDUFS7
LPIN1
AGGF1
HRH1
IL10RB
SNRPB
TTLL12
MAPRE3
ARMC1
ACOX3
TRMT44
HEATR1
POLR2C
NCBP2AS2
NCBP2
ERCC5
NCOA7
TTLL11
SLMAP
C9orf72
PRPF18
RC3H2
MED18
THAP4
ATG4B
CDK12
SLC6A17
SREK1IP1
CWC27
CARD19
TOMM22
HAGH
FAHD1
LIN54
MFAP3
FAM114A2
MRPL58
RAD54L
LOC400499
DTD1
SSNA1
ANAPC2
FANCI
GOSR2
SPRYD4
ABT1
OTUD6B
FER
ZNF862
GRPEL2
ACVR1
CCNA2
TMEM208
LRRC29
FASTKD2
CCDC66
PPP6R1
AQP2
CHMP7
RRP8
ILK
RASAL2
NOLC1
MBTPS2
PUS1
SLC12A6
NUTM1
NOP10
GAN
HIBCH
TTC32
POT1
HIP1R
RANBP6
PSMC1
ZNF197
SMIM8
TDP2
ACOT13
TPK1
RAB5IF
MPHOSPH10
MCEE
ANAPC10
ABCE1
TMEM132A
USP37
CNOT9
FBXO22
SRP9
MRPS17
BANP
LMCD1
HNRNPD
CRBN
COG2
HDAC2
SGCA
RHOG
ATP5MPL
TDRD7
STMP1
AGFG1
ZKSCAN4
TRNAU1AP
ZNF23
PLS1
DCAF8
SLC35F5
OGA
FANK1
SNX17
EIF2B4
SEPSECS
KSR2
TAS1R1
NOL9
ADNP
POLR2J
TBC1D15
PCID2
CUL4A
PSMF1
PIGC
NSFL1C
UTP25
CA2
ABCC11
SLC35A4
APBB3
LONP2
MRPL3
KLHL12
CTDSPL
FAN1
ZCCHC4
B3GAT3
PLD3
UGGT1
C19orf47
ARL14EPL
PGS1
THAP12
GVQW3
MRPS33
SPRED2
DEXI
CLEC16A
ABRAXAS2
BET1
YTHDC1
RNF43
BOLA1
TTC14
MKRN3
PINX1
EXOSC6
MIA3
STK38L
MED4
PTPRF
TRMT10C
NFKB2
ATG5
RAB4A
MTBP
MRPL13
MRPL10
LRRC46
ILF2
CPPED1
NUP155
TSSC4
PRKAB1
LTA4H
RPL22
HPS5
GTF2H1
RMND1
ARMT1
KRAS
DHX33
RFFL
PIP4P2
MRM3
GLOD4
FSCN3
VPS4A
PPRC1
MAGEA2B
MAGEA2
GNAL
ATP6V1C1
CHMP1B
MKRN1
CEP295
SNRPD3
GUCD1
SNRPD1
TMEM259
YARS1
S100PBP
EXOC3L1
CNN2
E2F4
TMA16
PPA2
GTF2B
CCDC115
ZNF599
BOLA2
C16orf91
SLX1B
SLX1A
BOLA2B
RHBDD1
FAM187A
EFTUD2
CCDC103
ILF3
PEX14
DFFA
PTP4A2
GSR
SUGCT
MPLKIP
PSD
FBXL15
PDE6D
COPS7B
STAG1
ADPGK
POLG
USP15
VMP1
PTRH2
SF3B5
TRAM1
SUPT5H
SYT7
SBSPON
CCNT1
ZNF554
TOMM6
TRAPPC8
VWA5B2
ATG4C
ZNF169
E2F6
ZNF562
STOML2
ALS2
PSMD12
ZNF148
ERLEC1
ASB3
CBWD5
MRPL40
HIRA
DIDO1
GID8
EML4
ANKRD22
USP36
UBE2J2
POLR3E
ZSCAN25
MRPS21
POLD3
KDM5A
CCDC77
POLDIP3
METTL2A
RPL26L1
XRRA1
SPCS2
MLX
COASY
BDP1
CCDC200
C8orf76
ZNHIT6
MEAK7
SLC22A18
TPRG1
TMEM186
PMM2
WDR45B
RABGGTA
LSM6
OSBPL7
VPS72
SCP2
CDKAL1
SMN2
SMN1
SRSF7
ANKRD17
PPIL3
NIF3L1
NIP7
COG8
MFSD14B
PUM3
VCPKMT
ZNF226
KHDC1L
PPIL4
ZNF594
EMC4
CIAO2B
CES2
COL14A1
SURF6
EPB41L4B
ZFPL1
TMEM262
CDCA5
MAP2K1
LOC100130520
CD300H
COL23A1
SLC25A19
PDCD6IP
TRIM46
KRTCAP2
NUFIP1
GPALPP1
HIF1A
ZC3H3
TSEN54
CASKIN2
CALM1
NPIPB6
RNF32
COPS4
RBFOX2
RBM48
PEX1
TOR1A
MRPL45
CREBL2
PSMD11
CLUH
PSMB6
OTUD3
AP2A2
TMED1
SEC62
SUMF1
SH2B1
DGAT1
TUFM
H4C11
DRAP1
C11orf68
BPTF
TMEM248