ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1916933 | Epidermal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◣ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX8512760: HCT 116

◢ SRX10382406: hESC H1

◢ SRX10382407: hESC H1

◢ SRX10382422: hESC H1

◢ SRX10382423: hESC H1

◢ SRX10382428: hESC H1

◢ SRX10382429: hESC H1

◢ SRX10382442: hESC H1

◢ SRX10382443: hESC H1

◢ SRX873813: Keratinocytes

◢ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

MTRNR2L2
FOXJ3
POLR3E
MTRNR2L8
NCOA7
H4C8
BRAF
UBE3C
ZNF839
SACM1L
ATXN2L
TIA1
MVK
PGK1
SLC35E2A
PPP6R3
EEF1A1
PRMT5
PDE4A
METTL26
B4GAT1
BCAR3
NPAS4
LTA4H
POLG
SLC35E2B
HSPA6
SHF
KNL1
GSTA4
VPS37B
LUC7L2
FMC1-LUC7L2
FMC1
CREBBP
GBA
FAM71E1
EMC10
APOA1
ING3
HECA
RBM23
NDUFS7
ILF2
C8orf37
RABEP1
RGPD2
RGPD1
RFX1
CCDC107
SS18
PAK1
RANBP2
HOMER1
DCT
HES4
RAB11A
DPP9
RNASEH2A
EFTUD2
CCDC103
DYNC1LI2
ZBTB21
ATP1B3
HMGN4
JARID2
JOSD2
EIF4A3
MTRNR2L9
HSPE1-MOB4
HSPE1
HSPD1
GNB1
NOCT
YTHDC1
DPH6
RNASE4
ANG
CDC42
TMEM259
PAXBP1
ANKLE2
RPS29
RPL9
LIAS
UBB
SMURF1
AP2A2
GOSR2
LYNX1-SLURP2
LYNX1
RALGAPA1
ELL2
HINT3
WDR45B
USP36
SMARCC2
SUDS3
ZNF547
TRAPPC2B
PPIL4
POLR3F
DZANK1
ARIH1
IPO13
CD164
BCL6
FBXO31
RRNAD1
ISG20L2
MRFAP1
CENPE
SSU72
COX19
CWC25
RTF2
PPP1R21
CLCN3
MAPKAPK5
UFSP2
ATP9B
COMTD1
JOSD1
ADARB1
WBP4
ELF1
CDC14B
TPBG
DOT1L
SMC2
LOXL3
DOK1
ORC5
RBKS
BABAM2
GUF1
HADHB
HADHA
ILRUN
TSPAN31
BZW2
ANKMY2
API5
SRI
GARS1
SYPL1
UBE2B
CDKL3
LOC101928764
ZNF891
ZNF10
PRMT9
THRAP3
OXSR1
TLE1
TRIM33
ZNF219
IQCH
AAGAB
PDXDC1
PSIP1
UROS
BCCIP
COQ7
OR1F1
TEAD1
EIF4ENIF1
STAM2
ACTR10
ATP8A1
TRAF4
SELENOW
CACTIN
STK19
DXO
IQSEC3
RHBDD1
ZNF300
RHBDD3
EWSR1
ZNF576
IRGQ
EPHB2
NDC80
METTL4
MLLT10
CTDP1
EMD
RPL21
LYRM4
FARS2
OPA3
DENR
COMMD1
CCT4
HROB
PSMD1
CAPRIN1
FRAT2
RPL14
ANKRD13A
DCTN1
APTX
TPT1
FKBP3
PRKCI
PAXIP1
MYO9B
HAUS8
LASP1
VARS1
PARK7
ZNF540
ZNF571
SETD5
NUP205
AHCYL1
PPP5D1
CALM3
PRDM10
MTRNR2L10
POLR2M
BRAT1
PPP1R13L
POLR1G
STK35
UPF2
NDUFA10
C21orf91
ASAH1
YTHDC2
FIGNL1
DGAT2
PSMG2
CEP76
VPS37A
CNOT7
LIMA1
USP15
ATG16L1
SPOP
REXO1
UBE2H
CCDC59
FKBP1A
CENPN
ALOXE3
PHRF1
ESYT2
H2BC10
KCNAB2
PKNOX1
NSUN4
TRAPPC3
MAP7D1
KANSL1
VAPB
HNRNPU
TMEM250
RPUSD1
CHTF18
NDST2
KDM3B
FAM168B
NUP58
MBD3
FBXO34
ICE1
NUDT15
MIS18BP1
CCDC138
PDAP1
BUD31
PAK1IP1
C6orf52
ZFAND2B
C9orf72
CSNK1G2
POLR1H
TCP11L2
ULK4
STX6
STK17A
TIGD5
EEF1D
NUP85
SLC35B1
EOLA2
ZNF593
IMPDH2
C1orf232
CDON
POR
FRAT1
PTDSS1
MTERF3
NUDT18
RAB6A
NDUFB1
CPSF2
PPP3R1
IBA57
C5orf15
CCNL1
MLST8
HGC6.3
TIMM22
ALDH4A1
TMEM242
FDXACB1
C11orf1
EIF1
FLCN
SS18L1
PSMA7
CEP78
BRPF1
MAP2
RTKN2
SPATC1L
STK38L
MOB4
RAB11B
OGDH
NOL8
CENPP
PFDN4
NUF2
PACRGL
FAM53C
CDC25C
MIA2
UBE4A
CCDC71L
UBE2I
RAPGEF1
LSR
MED23
DHX15
PEF1
SNX12
PPEF1
HSP90AA1
BCAS2
ARHGAP22
XPNPEP3
ST13
ATG16L2
KPTN
MAP1LC3A
B4GALT7
FBXO33
GNB2
DOHH
C15orf48
OXR1
FEM1A
TMEM260
RBM17
VDAC2
ATP5MC2
RTRAF
SCLT1
RAD51AP2
GPAM
C4orf33
ALKBH3
R3HDM2
SH3GL1
COX18
KCNMA1
HDAC2
KRT6B
ANKEF1
LCOR
USP1
C19orf48
FAM227A
CBY1
LEKR1
TADA3
ARPC4-TTLL3
ARPC4
CNOT6
SYNCRIP
CCDC83
TJP2
TSN
GMPPB
STAM
CPLX2
CDC73
DHX36
PIK3R3
COPS7B
KMT2A
C12orf66
EPHB3
TRIM39
IDH3B
UNK
URB2
TAF5L
SPTY2D1
PPIB
RAB10
USP37
CNOT9
UBE2Q1
VTI1B
ABHD6
ZSWIM7
TTC19
TRIP4
IFT52
ENOSF1
UIMC1
BCAP29
USPL1
HMGB1
RABL2A
XRCC6
DESI1
GGNBP2
SMIM8
POT1
ALG10B
FUS
UCHL3
COMMD6
GTF3C3
RNF139
PNO1
TTLL7
ARL8B
ARAF
ZNF628
MNAT1
RAB37
CCDC144A
HSD3B7
U2AF1L5
U2AF1
PRDX1
TMUB2
SETD1A
SPAST
TST
ST7L
MRPS5
MPST
CAPZA1
TBCK
AIMP1
MRPS24
TMED1
ASH1L
MIA3
TAF9
RAD17
AK6
MTF2
NBEAL1
CFAP221
PTPN4
BRD4
NEMF
LYSMD3
TUBE1
TES
RNF166
NAF1
LMAN1
FAM229B
CTU2
CCDC88A
C8orf33
WASF1
CDC40
VIM
TMEM222
MED4
FOS
ZC3H11A
RNF126
ERCC1
SUSD6
SLC25A26
LRIG2
FAM160A2
EIF3F
SUPT7L
SLC4A1AP
CTNNB1
HPS5
GTF2H1
KRT6C
PNPLA8
TRMO
EED
RPN2
MROH8
NDUFC2-KCTD14
NDUFC2
OMA1
DAB1
RBM42
RNF215
CYCS
RNASEK
MAML2
TTC30B
MAPRE1
MYL12B
YY1AP1
DAP3
GALNT10
PROSER1
NHLRC3
SFSWAP
MRPS28
LYRM1
DCUN1D3
TMEM161B
KRTAP9-2
CDCA7L
CTCF
ZNF76
RPP14
HTD2
PUM2
LRP2BP
ANKRD37
PLEKHM3
LPAR6
SCRT1
RAD23A
BIRC2
MKRN2
TSFM
GPR108
ITPRIP
TNFAIP3
OAZ3
MRPL9
FGGY
PEX3
ADAT2
WDR36
KIAA1586
RTTN
PHTF1
CCDC90B
SLC35F5
TLE4
RBM48
PEX1
MTREX
DHX29
COMMD9
ARHGEF7
AIG1
RPL22L1
PIGF
CRIPT
THAP9
SEC31A
CWF19L1
CD55
PAF1
BZW1
ATG101
SIK1B
SIK1
LRPPRC
C1D
CREM
LANCL2
RUVBL1
EEFSEC
CTBS
RICTOR
BTBD9
DDX5
CCDC6
AFF1
VEZF1
PPM1L
CHMP7
H2BC11
H2AC11
MAPK1IP1L
MET
VTA1
NMBR
FAM98B
UNC79
BTBD7
TCTE3
ERMARD
ERLIN2
CCDC7
MAP3K2
ZNF335
TRMT5
SLC38A6
PERP
CEP43
TEX14
RAD51C
NEDD8-MDP1
NEDD8
GMPR2
LENG8
RNF19A
RNF34
CBWD6
CBWD5
CBWD3
ZNF35
LCE3E
SERINC3
RAN
CBR4
AGTPBP1
ZFAND3
DIAPH1
SETDB2
CAB39L
ARRDC3
UBAP2L
C1orf43
USP2
KRT6A
GSTO2
ARL1
CDADC1
ADPGK
PLK2
PGAM1
SCAP
CNOT2
ADCK5
BRD3OS
WFIKKN1
SSBP2
ZHX3
ZBTB37
GLIPR1L2
BAIAP2L1
OSGIN1
HEXIM1
SMARCD2
GFI1B
GCNT3
CXXC5
BSPH1
BTBD2
ANO7
STXBP1
SBNO1
CUL3
FBRS
PBX2
ULK1
HDDC2
ETS2
PBX1
PXDN
TRAPPC9
USP22
IFI27L2
SP4
C4orf19
UBE2L5
CIB3
USF3
CAPN12
TTI1
RPRD1B
SCYL3
H3-3B
IQUB
PRELP
KASH5
JRK
ESRP1
COTL1
SMARCD3
PRPF40A
KCTD9
CDCA2
SETDB1
SLC29A4
SPRING1
RNFT2
CDK18
LARP1
MRC2
SMG7
CACNG6
SYNGAP1
VLDLR
SHPRH
MSRB2
ATXN7
TRIB1
SUZ12
ZNF512B
ARF3
C10orf67
APOBR
PI16
NPRL3
LRRN3
ARL6IP6
MTMR4
PRR12
USP34
TLCD1
BIRC7
C17orf58
SPIRE2
DAZL
MTRF1
DSTN
BFSP1
SIGIRR
USP38
SLC8A2
PHF21A
RASSF2
ZNF524
FIZ1
CBLC
RNF43
SP3
KCTD13
TMEM65
JPH4
C17orf64
RSF1
AAMDC
TUBA1C
MECOM
LARGE1
ALKAL2
TLK1
ARFGEF2
BCAS3
CATSPERG
CMBL
CAP2
TFEB
POLK
CERT1
USP32
IGLON5
C16orf72
ACTR3
MEAK7
NIM1K
NAV1
APPBP2
FOXJ2
SP2
CDC42EP5
HUS1
EFCAB2
ADNP
MSI2
CLTC
LHFPL2
CACNA1S
POU2F1
GREB1
ITPR1
FOXA2
SP1
DDI2
INTS9
HMBOX1
NAP1L5
CST3
RCAN3
GABRB3
CTCFL
NKX2-1
MYADM
SATB2
ZNF148
KCNQ2
CHRNA4
PCBP2
PHF23
VNN2
KLK7
RPH3A
PRDM11
OCLN
NPEPPS
DHX34
OR10H5
TSHZ3
FBXL19
PI4KB
MED6
LHX6
RASSF5
MDM4
TXNIP
SNX16
PLCXD1
DYNLL2
PLXDC2
AHCYL2
SERPINA3
ZNF205
IL26
TBC1D22A
PLCB1
TAF6L
HERC4
CREBRF
FOXK1
CNPY1
LMNB1
ARID2
BRD2
BBX
GTF2H4
FBXO11
ZGPAT
SMG1
SIGLEC15
ARFRP1
ADAMTS9
VILL
ZFR
PPM1D
TSC22D1
SKA2
PRR11
CA11
BRIP1
BCL2L2-PABPN1
BCL2L2
LAMC1
HMGB4
MRGPRE
ERICH6
ARC
BCAP31
ABCD1
ZNF131
SBK2
ATXN1
RALY
KCNK15
CROCC
PTPRH
LMBRD1
KMT2E
WBP1L
TMEM170A
LRATD2
KCNN4
TMCO3
PRPF40B
DCUN1D2
TRA2A
ZBTB4
POLR2A
PABPC1
MSRB3
HSD17B14
HMGN1
RARG
PHF2
AAAS
HOXC11
AMZ2
GNG8
PPP2R5C
GZMM
GNAS
MEF2C
STAT6
ATF7-NPFF
ATF7
MADD
ATXN7L1
SCYL2
DEPDC4
BMI1
KCNIP2
GRP
RNASEH2C
MRPL38
TLCD3B
CALHM2
TAF7L
TMEM271
CDKN3
TMEM126A
TCL1B
WDR26
TMEM30A
SOCS2
NCOA3
GTF2IRD1
SLC25A19
RIMS2
KLHDC10
KCNB1
CCK
UNC80
S100A16
PTGIS
PPP1R16A
KIF6
ATP4A
SPRY3
SHOX2
SEC13
ID2
HSPA1L
HSPA1A
APCDD1
GDF6
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
GABBR1
UBTD2
RIPOR3
NFAM1
MTOR
GJA1
TASP1
IRX6
EFS
E2F3
SEZ6L2
RBM27
ASPHD1
DDX59
CAMK2D
AJM1
ZEB1
PHF7
BAP1
PRAC2
PRAC1
KSR2
GATAD2B
ORC4
NPC2
MBD5
ISCA2
DPEP1
GSC
TRAPPC2L
GALNS
DGKH
TM4SF1
CPNE6
NTNG1
SLC25A6
KLK6
DNAJC27
ZNF384
TFAP2A
DOK5
STX16
COL20A1
PDE1B
SERPINI1
ROCK2
PDCD10
KRT8
ARHGAP39
WNK1
IREB2
DCAF5
MARCHF6
RUNX1T1
ARRDC4
SDC2
FAM214A
TNPO3
ANP32B
GET4
PAN3
NUCKS1
MYOZ3
GABPB2