ChIP-Atlas: Target genes

Potential target genes for NKRF

Query protein: NKRF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423793 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
NKRF's Target genes

◢ NKRF: Average

◢ SRX3322833: GM12878

◢ SRX3322834: GM12878

◣ SRX2423793: K-562

◢ SRX2423794: K-562

◢ SRX9739052: MDA-MB-231

◢ SRX9739054: MDA-MB-231

◢ SRX9739056: MDA-MB-231

◢ SRX9739058: MDA-MB-231

◢ NKRF: STRING

UTP20
RRP15
QTRT1
RBM19
TRMT1
CDK7
UTP25
METTL1
EEF1AKMT3
MCM7
AP4M1
C16orf71
ANKS3
SLC12A9
KLHL18
KIF9
NME1-NME2
NME1
RRP12
USP2
URB1
TTC27
PPIL2
HSP90AB1
PSME3
WDR46
PFDN6
NUP214
DHX37
UBR3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SLC19A1
GCDH
WDR74
SMYD5
POLR3D
KAT2B
FANCD2
DPH2
C16orf46
WASHC2C
CRCP
ACTR6
EBNA1BP2
CFAP57
CRNKL1
CFAP61
TMEM248
NEU1
CCT2
CRKL
SLC39A6
NPAS4
HCFC2
GLT8D2
CCDC86
NOL6
WASHC2A
HEATR1
SMTN
NEK2
ZNF593
C1orf232
CCNG2
GRWD1
GPATCH4
CNOT4
POC5
THADA
VARS1
WDR4
ATP6V0D1
IQGAP3
HSPBP1
CPEB4
PDE4A
CFAP299
CFAP298-TCP10L
CFAP298
IFT172
TWNK
MRPL43
SNRPE
LTV1
VPS33A
UFD1
CDC45
TRUB2
COQ4
GNL2
UBXN11
GAR1
BAG6
SCFD2
MZF1
NDUFA2
IK
DUS3L
MED25
PISD
FAM72C
SRGAP2
FAM72A
TAF13
UTP15
ANKRA2
TFIP11
SASS6
SPNS1
PPP1R13L
POLR1G
ZNF778
MTFR2
CDC6
MIS18A
NOP16
HIGD2A
CYB561D1
MRPS18B
IMP4
CCDC115
UNG
NLE1
RNF40
CCDC189
RPUSD4
FAM118B
GTPBP10
MOK
EXOSC5
BCKDHA
EXO1
DDX49
COPE
DHCR7
BCAS3
SUMF1
ATXN7L2
PHB2
CKMT1B
RRS1
GTF3C4
DDX31
POLR2J3
UBL5
NOL8
CENPP
TIMM44
LARS2
SKIV2L
NELFE
TMEM186
PMM2
TRIP4
PRMT1
AP3D1
NASP
PNO1
TFB2M
CNST
POLR2K
MRPL27
EME1
AXDND1
MRPS28
PAK1IP1
C6orf52
SUPV3L1
CDC37
DHDDS
DCAF4
ZNF165
GFM1
ENDOV
PPAN-P2RY11
PPAN
MDN1
RBSN
IPO4
CEP162
CKMT1A
ABCF1
OGDH
TADA2B
CCDC96
MFSD1
HAUS7
NUF2
RAD51
RPSA
PRMT2
NAGPA
AP3M1
ADK
RABL2B
DHODH
DDX21
RBM28
ADPRS
WFDC3
DNTTIP1
RPIA
UTP4
DERPC
CHTF8
FLAD1
ULK4
ATP6V1H
ZNHIT6
NUP35
IREB2
FBXL13
ARMC10
FAM86B2
AGFG2
SLC39A11
LARP4
SRGAP2C
FAM72B
DNAH7
NAT10
BMS1
UBN2
SSBP1
RPP40
PUS1
MAK
RTF1
COG7
PPM1F
PACRGL
MCRS1
SZT2
MED8
PARG
TRAPPC6A
BLOC1S3
WDR3
GDAP2
UBIAD1
PFDN2
NIT1
INO80
YIPF3
POLR1C
UTP23
PIGU
ZNF202
INTS7
DTL
ECSIT
TBRG4
NDUFAF6
CCNE2
WDR36
VTA1
NMBR
ZNF408
ARHGAP1
ZSWIM9
LIG1
EIF3CL
EIF3C
FDX2
LZTR1
HTR5A
GMNN
ZSCAN2
VPS41
C12orf66
ZNF74
TTC4
DPH1
POLR1F
TTC16
PTRH1
TSFM
NPM1
MRPL1
FAM86B1
TMEM208
LRRC29
DDX19A
MRPS23
CHEK1
RAD9A
TOM1
IFT140
CRAMP1
DNAJC28
BUB1B
DERL3
DHX9
FBXO5
SPCS1
GLT8D1
RNF121
LOC100133315
ODF2
SFXN2
ARL3
KLF16
DYNLL1
CSNK1G1
MEA1
KLHDC3
VPS18
SLC38A7
FKBP1A
ZBTB9
EIF4EBP1
TMEM150A
TFPT
PRPF31
PTPN23
HSDL1
DNAAF1
COMMD4
AUNIP
SIRT3
PSMD13
WDR73
SLC35A3
C12orf45
NAGK
CCNA2
COMMD9
DDX41
DHX40
XAB2
UTP18
MBTD1
TSEN2
ZSCAN21
TOP1MT
ZNF529
HERC3
SYNJ1
PPT2
NEURL2
CTSA
AKR1A1
TOR1A
INO80B
RTF2
PRPF3
WIPI1
LTN1
OTUD6B
UTP6
GTF2H3
EIF2B1
NOL7
C5orf51
MRPS17
AP5Z1
BBS12
LYRM4
FARS2
CNPY3
SLC25A26
DHX34
WASF2
PSMD14
BRMS1
XPO5
POLH
BLOC1S1
PGBD5
URM1
EEF1AKNMT
NDUFC1
NAA15
RAD51AP1
C12orf4
ANAPC10
ABCE1
URB2
TAF5L
TIGD5
EEF1D
PIK3C3
TRMO
MYBBP1A
MAK16
ITPA
RER1
MORN1
YIF1A
VPS50
HEPACAM2
YWHAG
EHD1
BBS5
TP53BP1
RPUSD2
SDAD1
MRPL17
PNPLA8
CSRNP1
GATB
STK11IP
CBWD5
CBWD3
USP16
PBRM1
GNL3
TOM1L2
DRC3
SPC25
KCNK5
PWP1
RPS27L
KNOP1
DYRK1B
MRM1
RRP9
PARP3
ALG1
ABCF2
PPIB
ABCB10
KTI12
B3GAT3
HEXA
RCL1
THBS3
MTX1
USP20
C9orf78
MTF1
WDR18
SYF2
TFB1M
CCNB1
DPP3
SERP1
EIF2A
LMTK2
ATG101
MED20
BYSL
GBA
RBM3
TTK
MPHOSPH10
MCEE
XKR7
PRKAR1A
KHDC4
ZGRF1
LARP7
SYS1
GPN2
PLK3
ARFGEF2
TNFRSF21
TOP3B
FZD9
FBXW9
NCLN
IPO11
DERL1
RBBP5
CDC25A
HAGH
FAHD1
G6PC3
SETD4
RPS19
EIF4B
IGBP1
RRP1
SLBP
SHCBP1
PEPD
SNRPC
HEATR3
BRIX1
TMEM234
EIF3I
SGO1
ZFYVE1
CDK5RAP3
SLC1A5
VMP1
PTRH2
LAMTOR5
ING4
PAQR4
EIF2B3
SERINC4
HYPK
RABL2A
ZFAND2A
MTHFR
CLCN6
PDE8A
SLC25A46
MED15
INPP5B
KAT5
DIMT1
RPL23A
KLHDC4
SPEF1
SND1
MAT2A
CCNB1IP1
FAM234A
SOCS1
DDX42
CCDC47
ZNF497
ATP5MC1
CFDP1
ZSWIM8
RBM34
ACOX3
TBL3
PHOSPHO2
CCDC173
EIF3K
SLC13A3
KIF20A
BRD8
KIF23
MRPS15
YARS1
S100PBP
RIOK1
CAGE1
NIP7
COG8
ZNF2
PRR3
GNL1
INPP5K
NOL10
NCL
SRSF7
C12orf43
ZCCHC7
PMS2
AIMP2
PPRC1
NARS2
ECE1
SYT5
RTEL1
DDX46
MRPL45
CYB5B
NUFIP2
HERPUD1
SNRPD2
QPCTL
LSG1
TCTN2
HBP1
CEBPZ
PEX26
TRAPPC8
KIAA0895
ANLN
SLC35B2
PIK3CA
GPATCH3
ELP1
ABITRAM
STAM2
ZNF583
TBC1D15
BZW2
ANKMY2
E2F3
MXD3
CWC25
KATNIP
GTF3C1
ARL14EP
SUPT5H
ITFG2
MRM3
GLOD4
SLC25A19
NBPF1
TOMM22
TTF1
ZNF771
PIP4K2C
PDCD2L
LRGUK
RRM2
PUM3
RPAP1
FBXW8
RAB5B
TIMM23
TAF1A
LRP2BP
ANKRD37
C6orf89
FZR1
CALCOCO1
GNAI3
MRPL24
ACOT7
CBWD6
PHB
CHID1
CARS1
CCDC146
TIMM10
C19orf53
DDAH2
TTC1
LZTFL1
PDP2
PCNP
RPF2
WDHD1
SOCS4
HARS2
HARS1
STYXL1
ANXA7
HM13
RGL2
TARS1
SLC35A2
TRMT6
MCM8
SNRPD1
MECR
VAMP7
ESPL1
HSPA9
ATR
ANAPC1
TMEM87A
GANC
CD320
TTC30A
IPO13
SYNCRIP
MED10
DCXR
XRN2
TOMM70
LNP1
CENPW
COX14
NIFK
VPS52
RPS18
L1CAM
LONP1
CATSPERD
AJUBA
CCDC187
SHC1
CKS1B
ZFPL1
CDCA5
TSN
GLE1
PRPF4
CDC26
BAGE4
BAGE3
BAGE
ASL
TPH2
VANGL1
NOP2
COX10
SF3B5
TRAPPC2L
GALNS
TPM3
PRAME
CLP1
SNAPC5
DYNC1I2
SLC25A32
DCAF13
CLASP2
RPL30
PPIH
PNPT1
RPS8
HEATR5B
GPATCH11
TAF1C
SMAP2
AURKAIP1
IQUB
FANCI
STIL
MARCHF8
CTU1
NUFIP1
GPALPP1
LRRC45
CENPX
SLC4A2
RMND1
ARMT1
FAM222B
RPS3A
RCCD1
IARS1
NTMT1
EXOSC3
MRPL40
HIRA
CLINT1
CFAP410
NOM1
MTR
RNASEH1
SLC35C2
TRIT1
MSTO1
CKAP2L
DAXX
UQCRC2
DNTTIP2
POLR3A
ZYG11B
DDX47
ZPR1
PNKD
AAMP
RNF181
NUDT2
KIF24
RPL5
SNX15
LTO1
B4GALT2
PABPC1
SF3A1
CCDC157
ADAT1
RXYLT1
SPATA4
GNAT2
AMPD2
POTEE
C11orf65
OXNAD1
DPH3
CDK4
COA7
MARK2
BLOC1S2
PTP4A2
FAAP24
CEP89
SCAMP2
TAF11
UBFD1
EARS2
UGGT1
RBKS
BABAM2
SETD6
LOC390877
GTF2F1
SPTY2D1
RBM8A
DNAJB12
RPF1
MNT
MIB2
POLR1E
EPS8L1
MAN2B2
TIMM17A
OSGEP
APEX1
NUTM1
NOP10
ZNF485
TNPO3
DTX2
CATSPERG
RPGR
JMJD7-PLA2G4B
JMJD7
GTF2H4
POLR1B
ZBTB49
LYAR
RACGAP1
ZNF26
ISG15
MRPL10
LRRC46
PSRC1
LAMTOR3
NME7
BLZF1
ATP6V1C1
NPC1
AK2
TOMM40L
RTL10
GNB1L
PPIL1
TIGD2
HACL1
BTD
GPN1
CCDC121
TMEM104
NAT9
NDUFAF4
KLHL32
SH3BGR
LCA5L
WDR26
CLASRP
ZCCHC4
EPS15
FANCF
SLF1
KIAA0825
RTN4IP1
QRSL1
ZNF239
EIF3H
PAFAH1B2
ZNF701
ZNF200
IPO9
PRDX1
ADAM17
CCT8
TOX4
RAB2B
SRGAP2B
FAM72D
TCF19
CCHCR1
ATG14
LOC101928764
ZMPSTE24
SPRING1
RNFT2
ANKRD42
ZBTB17
NDUFS3
KBTBD4
TAF6
CNPY4
VPS26B
NCAPD3
DDX39A
SUGP2
ARMC6
RNH1
EEF1E1
MITD1
ZNF850
EIF1
ERCC4
ZNF324B
ZNF383
HYKK
GAGE2C
GAGE2B
GAGE2A
RECQL
GOLT1B
NR1D1
NOC2L
TELO2
WDR27
C6orf120
ERCC6
ARPC3
CEP85L
CENPN
GTPBP4
FEZ2
WDR55
CS
ATP6V1E1
NRSN2
SNIP1
GUF1
RBL2
CHUK
THUMPD3
TIMM10B
ARFIP2
ADCK5
SLC39A7
RXRB
P2RX6
NEIL3
GDAP1
UMAD1
ZC3HC1
RPS20
GEMIN5
TCFL5
COA3
CNTD1
CSTF3
TANGO2
ZNF181
PPIP5K2
GIN1
USP54
ZWILCH
RPL4
RHEBL1
MRTO4
EMC1
ARFGAP2
BBC3
SECISBP2L
RPTOR
CFL1
ZC3H15
GPR89A
UBE2L3
WDCP
TROAP
MRPS2
C9orf116
PPIG
CCT5
ATPSCKMT
SIRT4
HSPA5
TRIP12
FBXO36
ZNF557
SPG21
SEC24A
MTERF1
BRD9
RNMT
FAM210A
ING2
DUSP12
ACBD3
BIRC5
ZNF766
NECAP2
PAK4
NSUN5
ING3
NOLC1
QTRT2
CCDC191
THAP7
GPN3
FAM216A
SUPT6H
SDF2
STX2
PPIF
FOXP4
UCP2
ERAL1
FOXJ1
ATP6V0E1
IQCH
AAGAB
TSC1
GFI1B
ZNF566
SMIM5
ARHGAP35
KIFC1
DDX10
DPAGT1
ZNF121
HNRNPUL1
OXA1L
RPS6KC1
GABARAPL2
PPAT
PAICS
FAF1
WDR61
TPR
ODR4
KLHL20
THNSL1