ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423836 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX3010277: A549

◢ SRX3010278: A549

◢ SRX150381: GM12878

◢ SRX3009984: GM12878

◢ SRX3009985: GM12878

◢ SRX2423904: HeLa

◢ SRX2423905: HeLa

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX824619: LNCAP

◢ SRX824620: LNCAP

◣ SRX2423836: MCF-7

◢ SRX2423837: MCF-7

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

SLC35E2A
POLG
PRKCI
IQCH
AAGAB
PTDSS1
MTERF3
SLC35E2B
CDIPT
POR
PDXDC1
EED
ZNF219
SPATA17
GPATCH2
UTP18
MBTD1
CNOT6
ANKRD13A
FBXO33
MYO9B
HAUS8
OGA
DNMT1
GNB2
ATG101
CDC25C
FAM53C
TADA3
ARPC4-TTLL3
ARPC4
TIGD5
EEF1D
PRKDC
MCM4
SRI
CENPN
PFDN4
FUS
UROS
BCCIP
FLCN
EIF3B
PNN
MOCS3
DPM1
OXR1
NR6A1
BCL6
PARK7
MYL12A
PCNT
C21orf58
MRPS11
MRPL46
DNAAF3
UIMC1
LRPPRC
TMEM260
HDAC2
NOL8
CENPP
PPP5D1
CALM3
S100A13
CHTOP
FRAT1
BZW2
ANKMY2
PAXIP1
TCP11L2
INAVA
PABPC1
CDON
CD164
SELENOT
TAF15
PRR19
PAFAH1B3
NDUFB1
CPSF2
LSR
UQCRC2
STK35
PKNOX1
ATP8A1
YY1AP1
DAP3
USP15
PRCC
DISP3
UFD1
CDC45
TARDBP
ZNF687
PPP1R13L
POLR1G
PSIP1
RMND5B
PIK3R3
GIPC1
AKT1S1
TBC1D17
WASF2
PRMT1
DGAT2
PTCD3
POLR1A
ATF7-NPFF
ATF7
SELENOW
UBE2B
CDKL3
FKBP3
PMVK
SMC3
C21orf91
MYL12B
SNAP29
PI4KA
ULK4
IFT52
CFAP77
RPN2
MROH8
ZFAND3
AFF1
CFAP221
HHIPL1
CCDC85C
MTMR14
ALDH4A1
DOHH
FAM156A
FRMD6
KCNAB2
NOCT
RHBDD3
EWSR1
NDST2
DDX42
CCDC47
SYN1
PRDX2
WRAP53
TP53
CDK16
AKIRIN1
UQCRH
LRRC41
PCBP2
TOX4
RAB2B
BRAT1
MGRN1
GPR108
PHRF1
MAOA
ERCC6L2
CNOT10
MORF4L1
DPP9
FRAT2
CLTC
CENPE
SRCAP
LOC730183
UFSP2
GET3
NFYC
ARAF
RITA1
DDX54
RNFT1
PABPC4
GSTO2
COQ10B
MIA2
MAT2A
ENSA
ZNF335
H3-3B
ARL6IP6
PRPF40A
SRSF3
C6orf226
INTS2
PIF1
KMT2E
BZW1
COMMD6
UCHL3
ATG16L2
CSNK2A1
DAZAP2
RNASEK
INO80D
UQCRQ
GDF9
FANCI
ASH1L
HDLBP
SEPTIN2
USP11
COPS5
PRCP
DDIAS
CCT5
ATPSCKMT
DDX5
LIN54
RMND5A
RNF103-CHMP3
ZBTB8OS
RBBP4
RPL35
ARPC5L
NR1H2
TSPAN4
POLR2L
HYAL2
SLC35C2
RBM8A
FOS
RPL19
ESRRG
UBA1
SS18
SIRT4
TPD52L2
UBE2A
GTF2A1
PTCD2
MRPS27
CSDE1
KAT7
SF3B4
LSG1
PPIA
MRPS18B
RAB28
BCLAF1
LARP4
SETD5
RAVER1
MED13
KMT5C
ANP32E
DHPS
ATP6V0C
TXN2
MTCH1
MAPK1IP1L
SERBP1
TRMT12
PPIB
MIA3
DHRS12
TCF25
LYRM1
DCUN1D3
EIF4A1
SDR39U1
AZIN1
HSP90AB1
PTOV1
HEXIM2
GRIPAP1
ZNFX1
SMG8
ARFGEF2
LRCH4
FBXO24
EIF5
SASH1
TPBG
STAG2
MYL6
ZFP91
LPXN
SREK1IP1
CWC27
ZFP14
MNT
HAP1
KLF7
ZSCAN31
CDCA7L
KDELR1
ABHD16A
RPL22
SRXN1
PTP4A2
DOT1L
UBAP2L
C1orf43
LANCL2
ZDHHC5
FAM227A
CBY1
TRA2B
SRPK2
INAFM1
COPZ1
CYTH2
RPL13A
APPBP2
BRD2
USP32
H4C15
H4C14
PRR3
GNL1
GART
TUFT1
H2AC20
H2BC21
H2AC21
H3C6
PPFIA3
C19orf73
DIAPH1
NFX1
CNOT4
SYVN1
PRRT1
PPT2
ASAH1
SMARCD2
LUC7L2
FMC1-LUC7L2
FMC1
PSMD6
TRIM37
KCTD2
ATP5PD
BCL7B
AMD1
SP4
HES1
EPC1
CXorf56
SLC3A2
MCL1
SRSF5
NAA50
ATP6V1A
POLG2
SLBP
ANKRD12
ZNF672
TRA2A
WDR6
PYGO2
LOC101928120
HNRNPH1
RAB11B
GSK3B
MED26
TINF2
ZBTB21
POLR2J3
TLK2
H1-2
ARRDC3
CHMP3
PTPA
CRAT
TUBB4B
NPC1
TMEM183A
RFX3
YTHDF3
PPP1R15A
RBBP6
GABPB2
PTGR2
ATF4
MADD
RALY
H1-3
CBWD5
CBWD3
SIN3A
MEIS1
EIF4B
RCCD1
ZBTB4
POLR2A
STX16
HNRNPC
SRSF6
TEDC1
BCAS3
UBC
MIB2
LSM12
SUMO2
RPL10
PHF8
TIMM17B
PQBP1
PPP4R3B
PRPF38A
ORC1
BLOC1S1
FAM43A
YWHAZ
KLF10
POLR1B
H4C12
PRMT2
TMEM219
HMGN2
TUBD1
RPS6KB1
GALNT10
ZNHIT2
TRAF7
C8orf37
OTUB1
RBM3
NARF
BRIP1
RRAS
SCAF1
MORN2
DHX57
BICRAL
TBCC
CIRBP
H4C5
MLST8
RPL11
HCFC1
TMEM187
TNRC6B
PPP2R5C
CUL2
UPF1
DUSP3
DNAJC28
NBN
SRSF1
PPM1D
RSRP1
SLC38A2
HNRNPF
RPS12
ILF3
IMMT
RABGGTA
CYB561
CDT1
SMARCAL1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RPS27
H2BC4
H2AC6
PCIF1
H2BC18
H3C13
WDR37
HEXIM1
MEPCE
ZCWPW1
SDCBP2
KPNA2
ZZEF1
CYB5D2
CHMP4A
SRSF7
CCNL1
PDCD6
PIP4K2B
DHX40
WASL
NCOA3
H3C1
H4C1
TMBIM6
CPE
TAF4
RNH1
EEF1A1
WBP11
C12orf60
NME1-NME2
NME1
PSENEN
H2BC17
H2AC17
VPS45
ID1
H3C15
H3C14
H2AC19
H2AC18
NABP1
RPL8
CAP1
PPIL3
NIF3L1
PSMD8
ACBD5
PAGR1
PARD6B
ROBO1
LSM14A
AGPAT1
RNF5
YEATS4
DUSP1
PTPN1
ZC3H6
DBP
RPL41
ANKRD17
ZC3H10
H2BC8
H2AC8
MBLAC1
MRPL51
NCAPD2
HNRNPA2B1
CBX3
PSMD14
NR4A1
NET1
H2AX
GRK6
CBWD2
TRIB1
RPL7A
MED22
ATG2A
ZNF524
FIZ1
UBE2M
DDX59
TIMM50
RPLP1
DNAJC27
TP53RK
IRF3
BCL2L12
PSPC1
RBBP5
TOB1
GMNN
SF1
RMI1
HNRNPK
MTCH2
TRIM33
SERTAD3
HDAC1
H4C8
GPSM3
OSGIN2
EGR1
FTH1
SLC25A6
PER2
IRF2BP2
CFL1
MBNL1
MAML1
PCYOX1L
OARD1
NFYA
KEAP1
RPL26
CEP63
ANAPC13
PPP4R3A
H2AZ1
NOL11
ALG13
FBXO31
MAP1LC3B
DIDO1
HNRNPL
COX19
GID8
EIF2D
NUFIP2
NASP
SDHAF2
CPSF7
RPL39
WWTR1
PRKAR1A
TANK
CACYBP
VMP1
PTRH2
ZNF362
SLC39A4
LOC114841035
FKBP2
VCL
RGL2
TXNIP
USP42
PRDM10
FBXW4
SPRYD4
ZNF254
CBWD6
SPAG7
RPL22L1
DDX6
GPATCH3
FUZ
TPX2
HSF1
BOP1
CLDN7
USP54
TRMT112
PRDX5
AP3S2
PPM1L
SLC43A2
SLC25A25
NAIF1
SCYL1
GET4
ZWILCH
RPL4
FNBP4
MORF4L2
SERP1
EIF2A
HNRNPAB
EMD
ELL
ERN1
HECTD1
ARIH1
ACTR3C
LRRC61
FAM227B
DTWD1
ZNF263
PTMA
STK40
LDLR
SUMO3
TOP1
TSPAN31
MRPS24
PSMA7
SS18L1
CNOT3
SUPT16H
H2BC11
H2AC11
H2BC15
H2AC15
TSC22D1
SKP1
PSMC5
FTSJ3
PSMD3
PHF12
PWWP2A
SNX5
MGME1
TXNDC11
MARK2
MYC
ZNF248
USP9X
GTF2IRD2B
JUN
SBDS
TAF7
LOC730098
RPS26
EIF2AK3
ING5
VAMP2
MXD3
PIGO
TRIP11
SEC16A
C9orf163
CREM
WDR4
H2BC12
H2AC12
PDIK1L
ZNF217
ZBTB37
RPSA
RPL10A
SMARCC1
AP1G1
TRIP4
ING3
ZAR1L
BRCA2
GNA13
H3-3A
TOMM6
ATP5F1E
HIRIP3
UBE2T
BCAS4
DDX43
TST
MPST
ACTB
NOTCH2NLA
H2BC5
JUND
SF3B2
TPM4
SP3
ATF6B
SKA2
PRR11
SLC50A1
PTP4A1
TMEM258
FEN1
RPAIN
NUP88
VAPB
PRUNE1
MINDY1
HMGB1
LMBRD1
EXD2
PGBD2
ATAD2B
SLX1B
SLX1A
BOLA2B
BOLA2
STXBP3
BOLA2-SMG1P6
DCAF6
MPC2
TBX2
TTLL7
PPWD1
CENPK
HIGD2B
BBS4
MPDU1
LOC100996842
EIF1
KDM3B
AURKAIP1
RBBP7
DGLUCY
RPS6KA5
NR4A3
LATS1
PPP1R15B
ZNF706
SAPCD1
FOSB
MAP3K2
VCPKMT
HNRNPUL1
TUBA1C
MAPK6
ELP5
CTDNEP1
RPS3
SARAF
RAB3GAP1
PSMD5
HBP1
C14orf28
PPP2CA
SFPQ
SETD2
SRF
BRMS1L
ADPGK
SOD2
FAM110A
RPL28
NACA
PAIP2
CALM1
H1-4
EIF4A2
DDX3X
LEKR1
GRHL2
PTGER4
QRICH1
WBP1
JUNB
LRRC37A3
NME2
SPTAN1
COIL
ZMYND11
AHI1
PROSER3
MAFA
FOXA1
TTC6
SLC39A7
RXRB
FAF2
SPAG4
NDFIP1
HNRNPU
DNAJB4
FUBP1
CCNT2
ISOC2
PGP
NFE2L1
MICU2
KAT6B
CHD2
GPBP1L1
FCHSD2
LUC7L3
SULF2
UBALD1
ZFP1
CNOT8
HMGB2
CCNT1
HOMER1
OTUD6B
RPS29
ATAD2
TPI1
CHD1
TMED1
ZNF720
H4C11
RPS2
MAN2C1
RPS11
YME1L1
NOG
DYRK1B
RPS20
CDV3
HARBI1
ATG13
GABPB1
MCM7
AP4M1
BAG6
MLF2
PWP1
AMOTL2
UBN1
GLYR1
PLXNA3
METTL2A
SLC39A9
ERH
PLEKHG5
ZNF143
EIF3E
SLX4IP
SHC1
CKS1B
HES4
RACK1
AP3S1
NUCKS1
BNIP1
TOP2B
HNRNPA1
CBX5
BTG1
SYPL1
LEMD3
PKIA
MTREX
DHX29
ARF4
DPY19L4
PPRC1
ID2
CELSR3
CSNK1A1
CLK1
PLK4
CCDC59
MRPS34
EME2
BCAS2
GRWD1
RCC1
RPL12
LRSAM1
RBM15
CCT2
RAP2A
H3C11
MFSD4B
ZNF274
PCF11
USP22
OTUD7B
C3orf14
SLC33A1
SLC25A19
C19orf48
CEBPB
NAA25
PIGW
MYO19
NCOA5
NAB2
MICOS10-NBL1
MICOS10
ZNF124
ZKSCAN2
CACNG4
EPPK1
CD55
CSE1L
SART1
NDE1
MARF1
CSRNP1
PDCD6IP
WDR89
SREBF1
YWHAB
CSTF1
AURKA
TATDN1
NDUFB9
RRP12
DLX4
DDX39B
IER5
ANKRD52
ISCA1
MAPK8IP3
MEF2D
TUBA1B
HSPA8
UBE2D3
DNAJB12
ACTN4
TAF5
GLUL
RPRD2
CERS5
SELENOH
RPL13
AGO2
PLEKHF2
SPATC1L
ECH1
UBE2V2
TFAP2C
OVOL1
DCAF5
RBM14-RBM4
RBM14
NELFCD
NDUFS3
KBTBD4
SAP30BP
RECQL5
HNRNPA3
E2F3
TPT1
ZYX
NECTIN2
SMC1A
RIBC1
MCU
CHD6
ZNF438
SPAG9
RNF19A
C17orf58
SUCO
RPL23A
ZCCHC8
SKAP2
H4C4