ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2423837 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX3010277: A549

◢ SRX3010278: A549

◢ SRX150381: GM12878

◢ SRX3009984: GM12878

◢ SRX3009985: GM12878

◢ SRX2423904: HeLa

◢ SRX2423905: HeLa

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX824619: LNCAP

◢ SRX824620: LNCAP

◢ SRX2423836: MCF-7

◣ SRX2423837: MCF-7

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

SLC35E2A
SLC35E2B
PFDN4
PRKCI
PTDSS1
MTERF3
PDXDC1
ZNF219
TMEM253
GIT2
ANKRD13A
FLCN
CENPN
MYL12B
CDIPT
CDC25C
FAM53C
EIF3B
NOL8
CENPP
FBXO33
NR6A1
ATG101
EED
TADA3
ARPC4-TTLL3
ARPC4
HDAC2
POLG
BCL6
GNB2
PIK3R3
TMEM260
FUS
TIGD5
EEF1D
YY1AP1
DAP3
UTP18
MBTD1
DNMT1
UROS
BCCIP
LSR
MYL12A
ATF7-NPFF
ATF7
IQCH
AAGAB
C21orf91
NDUFB1
CPSF2
SRI
INAVA
BZW2
ANKMY2
WRAP53
TP53
OGA
LRPPRC
WASF2
FOS
UQCRC2
ASH1L
OXR1
TAF15
PAXIP1
PRCC
CNOT6
DISP3
SPATA17
GPATCH2
CSDE1
PPP1R13L
POLR1G
PSIP1
PKNOX1
IFT52
SRCAP
LOC730183
MYO9B
HAUS8
PPP5D1
CALM3
FKBP3
FANCM
PRR19
PAFAH1B3
FRG2C
DNAAF3
NDST2
DGAT2
CFAP221
TTF1
CFAP77
RHBDD3
EWSR1
STK35
S100A13
CHTOP
CDON
RNFT1
POR
ATP8A1
DOHH
PARK7
TARDBP
RITA1
DDX54
CD164
PRMT1
HYAL2
UBE2B
CDKL3
USP15
ULK4
ERCC6L2
ESRRG
TSPAN4
POLR2L
C6orf62
ZFP14
PRPF40A
ARL6IP6
PNN
TRAPPC6B
MOCS3
DPM1
CDK16
BCLAF1
FAM156A
PMVK
UFD1
CDC45
MTCH1
TBC1D17
AKT1S1
SELENOW
RPN2
MROH8
CDCA7L
SMC3
ZFAND3
PRKDC
MCM4
NOCT
BZW1
KCNAB2
INTS2
GSTO2
UQCRH
LRRC41
TCP11L2
RNASEK
C17orf49
ALDH4A1
H3-3B
UNK
SASH1
PARD6B
SELENOT
LYRM1
DCUN1D3
PTCD3
POLR1A
FRMD6
FRAT1
CNOT10
COQ10B
TRIM37
ZNF335
BRIP1
HDLBP
SEPTIN2
PRDX2
RNASEH2A
PSMD6
TSKS
AP2A1
MGRN1
TOX4
RAB2B
CSNK2A1
RBBP6
RMND5B
MED13
CCT5
ATPSCKMT
SIRT4
USP32
NFYC
DDX5
MRPS11
MRPL46
PCNT
C21orf58
PKIA
SS18
LARP4
FAM186A
GRIPAP1
DNAJC28
PPM1D
COMMD6
UCHL3
LUC7L2
FMC1-LUC7L2
FMC1
LIN54
GIPC1
DAZAP2
PPIA
MORF4L1
MADD
MIA2
ZNF687
LRCH4
FBXO24
MAOA
UIMC1
FRG2
KMT2E
LANCL2
MAT2A
EIF5
SNAP29
PI4KA
TPBG
SYVN1
SYN1
FRAT2
NCOA3
PYGO2
LOC101928120
PHRF1
HSP90AB1
AFF1
KLF10
CENPE
UFSP2
C4orf47
APPBP2
HSPB1
SF3B4
TUBD1
RPS6KB1
EPC1
DENND2C
LRATD2
HHIPL1
CCDC85C
ATG16L2
WDR4
COPZ1
MTMR14
TRIP10
GPR108
FAM227A
CBY1
KLF7
DUX4
RAB28
ID1
ROBO1
SDR39U1
GSK3B
EIF4B
CEP63
ANAPC13
TRA2A
RPL35
ARPC5L
H2BC21
H2AC21
H2AC20
ZDHHC5
PPM1L
DPP9
MED26
YWHAZ
NFX1
SREK1IP1
CWC27
DDX42
CCDC47
WDR37
H4C15
H4C14
PTCD2
MRPS27
RNF103-CHMP3
RMND5A
ETV2
COX6B1
LSG1
HRC
HNRNPC
GART
POLR1B
TIMM17B
PQBP1
MAPK1IP1L
ZBTB8OS
RBBP4
H3C15
H3C14
H2AC19
H2AC18
MRPS18B
MRPL35
IMMT
GTF2A1
KAT7
UBAP2L
C1orf43
BCAS1
CSPP1
COPS5
RBM8A
ZNFX1
SRSF6
FANCI
CBWD5
RBM3
ATP6V1G2
DDX39B
NFKBIL1
TMEM219
HMGN2
HEXIM2
RPL10
SLC35C2
BCAS3
PRCP
DDIAS
POLR2J3
MEIS1
PPP2CA
NBN
MYL6
PPP1R15A
PLEKHA4
PTP4A2
GTPBP6
PTPN1
ANP32E
NR1H2
MICU2
ZNF217
RAVER1
TRA2B
PRMT2
EEF1A1
IQCE
BRAT1
ALDOA
SRSF3
STAG2
PIF1
SMARCC1
MNT
STXBP3
SRSF1
TRMT12
EIF3E
PTOV1
AKIRIN1
RALY
RSRP1
CYTH2
PPP2R5C
HSD17B8
SLC39A7
RXRB
PPFIA3
LIN7B
C19orf73
ANKRD12
TXNDC11
PRR3
GNL1
METTL2A
SRSF5
ATP5F1E
GET3
MORN2
DHX57
ATF4
INAFM1
RPL11
CLTC
TBX2
UBE2A
TANK
TTLL7
LY6G6F-LY6G6D
LY6G6F
ABHD16A
TUBB4B
TCF25
CBWD3
PIP4K2B
OSGIN2
INO80D
VCL
SLC25A24
HAP1
C6orf226
CALM2
ZNF672
RMI1
HNRNPK
VAMP2
PABPC4
FTH1
HNRNPH1
HIPK1
RAB11B
ZNF248
PABPC1
ZMYND8
GMNN
CHMP3
ARAF
ENSA
ARFGEF2
TUFT1
SLC3A2
NCAPD2
MRPL51
SRPK2
DHPS
ZNF263
CLDN4
MIB2
TMEM187
HCFC1
ZSCAN31
VPS45
PHF8
DUSP1
H3C6
HNRNPAB
RPLP1
ZBTB37
C8orf37
OTUB1
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
HNRNPA1
CBX5
ATP6V0C
C3orf14
CNOT4
COL23A1
UPF1
BOLA2-SMG1P6
SRXN1
CAP1
SLBP
GABPB2
MORF4L2
PIP5K1A
HEXIM1
H3C13
H2BC18
COX19
FAM110A
RPS29
CEBPB
ATG2A
BCAS4
ASAH1
YEATS4
HNRNPA2B1
CBX3
BRD2
NCL
ELL
ERN1
MED15
DHX40
PSPC1
CPE
SULF2
CCNT1
YTHDF3
SERBP1
AZIN1
ANP32B
HOMER1
SETD2
FNBP4
NARF
SMC1A
RIBC1
RHEB
SCAF1
RRAS
RPLP0
SLC25A25
NAIF1
ECH1
RNF151
RPS2
PCIF1
RNASE4
ANG
RPL13A
IER5
ATXN7L1
PPP1R15B
TPD52L2
ABHD16B
CELSR3
NR4A1
ZDHHC20
PIGW
MYO19
TMEM79
SMG5
ATP9A
H4C1
H3C1
H1-1
EIF1
PLCG1
PCBP2
PAIP2
SDHAF2
CPSF7
DIDO1
RBM14-RBM4
RBM14
GID8
SYT1
BMP7
TXN2
PTGR2
PRMT6
H3C3
H2BC3
HSF1
BOP1
LATS1
CFL1
MUS81
ANKRD17
SMARCAL1
PPP4R3A
ACYP2
TRIB1
NASP
PPP4R3B
RNF41
NABP2
RNH1
TRIM33
TYW1
SBDS
UBC
ZFP91
LPXN
LMNA
WDR6
KDM5C
DSP
H3C12
H2BC17
H2AC17
AEN
AGAP2
WWTR1
TSPAN31
DOP1B
H1-2
NUFIP2
PSMD12
PMEPA1
IST1
BICRA
RPL19
CACNB1
CUL2
ZC3H10
RPL41
TMEM238
RPL28
FBXL19
FKBP2
TINF2
LOC114841035
HECTD1
ARIH1
ING3
NOL11
XKR9
LACTB2
CHD1
ZWILCH
RPL4
RGL2
SP4
EIF4A1
SCAND1
ZNHIT2
FAU
ALG13
MCL1
RAB3GAP1
ZNF706
PTPA
CRAT
FCHSD2
TOB1
RPL7A
MED22
SKP1
AP1G1
BRMS1L
SETD5
ATP6V1G1
HNRNPL
H4C12
WASL
SLTM
SFXN5
EIF2AK1
SPRYD4
ZNF274
SNW1
CFDP1
SLC25A6
CEP350
RNF7
USP1
NAB2
NRAS
UBQLN1
SLC50A1
DPM3
NPC1
GABPB1
SIVA1
USP8
H2AX
CCNT2
TSC22D1
ARL6IP1
SRSF2
MFSD11
CHD2
TOMM6
SEC31A
CSRNP1
PRDM10
FOSB
ING5
NAA50
ATP6V1A
DHRS12
AFF4
BCL2L11
CD9
HARBI1
ATG13
DDX6
ARPP19
BCL7B
CAMSAP2
PRR13
RPS3A
MMADHC
PMPCB
ZZEF1
CYB5D2
MAP3K2
RPL22
EIF4A2
PIGO
TNFRSF12A
CLDN6
THOC6
HCFC1R1
ZNF254
HES4
CSTF1
AURKA
RPL12
LRSAM1
RPS12
POLR2M
CLK1
MYC
ZNF157
RPS15A
UBE2D3
DDX59
TAF5
BFSP1
DSTN
PSMD8
GRK6
IPPK
TBCC
BICRAL
EIF2S2
USP22
CSE1L
UBN1
GLYR1
KDM7A
PRC1
KMT5C
S100A10
GPATCH3
SUCO
TIA1
PER2
SKA3
MRPL57
TLK2
FAM120AOS
FAM120A
METTL2B
UQCRQ
GDF9
DIAPH1
CCNL1
FAM43A
RBM22
EIF2AK3
DYNC2I2
LEKR1
MED10
SPATA2L
PHF12
WBP11
C12orf60
EGR1
RBM5
RNF5
AGPAT1
SMG8
PLEC
TMEM43
CHCHD4
ATAD2
PNP
TRAPPC6A
BLOC1S3
ST20-MTHFS
TST
MPST
USP11
RPS11
ATXN2L
PRSS22
TMEM258
FEN1
KMT5B
DDX3X
USP48
NHP2
ATP1A1
SPAAR
IFRD1
DNAJB4
FUBP1
MDM2
NUCKS1
SERP1
EIF2A
RPL24
CPEB4
MBTPS1
LMTK2
MIA3
ATAD2B
ENOSF1
XPOT
ANKRD36B
MICALL2
SPATA2
TACSTD2
PWP1
UBE2T
PWWP2A
SENP6
RCCD1
ZNF668
ZNF646
PPM1A
TNRC6B
TUBA1B
ST7L
CAPZA1
SUPT16H
NUP62
IL4I1
ATF5
PRDX6
SENP5
TPRA1
TUBA1C
NOP58
MCM2
RRM2B
ARRDC1
SQSTM1
CTDSP2
ISG20
LEO1
ARNT
PSMD14
CTNNB1
USP54
BTF3
CCT2
KLF4
ANKRD36
AMOTL2
IVNS1ABP
SIN3A
RMDN1
CPNE3
RIN2
ZCWPW1
MEPCE
NKIRAS1
POLG2
RABGGTA
EMC2
NUDT16L1
NR1D2
TRMO
MTREX
DHX29
ACBD5
GPR89B
TEDC1
CRIP1
HNRNPU
NET1
SART1
NXT1
ILVBL
EAPP
TOP1
PSPH
CCT6A
UMPS
EMP2
TRAF7
AHI1
PSMD9
HPD
HSPA4
BICD2
LPP
KTI12
STRADA
TRIQK
TRIP11
UCHL5
RO60
NDUFV3
CRYAA2
CRYAA
MAN1A2
PRPF3
CLBA1
H2BC12
H2AC12
SYNCRIP
ADAR
ARF4
PPWD1
CENPK
FAM214A
YPEL5
CBWD2
TAX1BP3
EMC6
MBNL3
TNFAIP1
IFT20
H2BC11
H2AC11
VMP1
PTRH2
DZIP3
CIP2A
TEX14
RAD51C
USP17L22
USP17L20
RACK1
LSM12
G6PC3
PDCD7
TFAP2C
RPSA
ARRDC3
SARAF
INTS8
INO80
UNC13D
ILF3
PNISR
VCP
SEC16A
C9orf163
PTPN23
HES1
KDELR2
C14orf28
RAC1
SLC39A1
CREB3L4
ACIN1
CANX
C14orf119
HENMT1
SRSF7
SOX6
C11orf58
NOTCH2NLA
GTF2H3
EIF2B1
RALGAPA1
TLNRD1
WARS2
KLHDC4
RPS3
FBXL14
HNRNPUL1
CALM1
MYADM
SLC25A21
PDE4DIP
BCAS2
ZHX2
H4C11
H4C5
HDAC1
RPS27
RAB13
PPP1CB
STK40
KDM6B
TAF4
PCMTD1
TPM3
UBE2J2
NIPAL1
CNGA1
RFX3
MED25
FUZ
ATXN7
MYOF
SEC24A
CCDC59
TES
PSMC5
FTSJ3
H2BC15
H2AC15
SFPQ
CTCF
GLUL
KRT8
PPIG
KLHDC2
CBWD6
ZC3H6
HSPA8
MAML1
HSPA5
H4C7
H3C7
H2BC9
MPHOSPH10
MCEE
SKA2
PRR11
ZBTB21
CFAP410
ANKHD1-EIF4EBP3
ANKHD1
ZNF497
RAB40C
CYB561
TRAPPC9
DBP