ChIP-Atlas: Target genes

Potential target genes for RFX1

Query protein: RFX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424432 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX1's Target genes

◢ RFX1: Average

◢ SRX5457513: Hep G2

◢ SRX5457514: Hep G2

◢ SRX2424672: K-562

◢ SRX2424673: K-562

◢ SRX2424777: K-562

◢ SRX2424778: K-562

◢ SRX2423398: MCF-7

◢ SRX2423399: MCF-7

◢ SRX2424431: MCF-7

◣ SRX2424432: MCF-7

◢ RFX1: STRING

PTPN13
QTRT2
CCDC191
DNAAF3
CHURC1-FNTB
CHURC1
CACUL1
CFAP36
SIPA1L1
HSP90B1
RFC5
PES1
NAP1L1
SLC51B
TCTN3
AP1S1
CDK20
LOC112694756
RPL35A
IQCG
NAA40
STK19
DXO
ZBBX
ZNF473
VRK3
SPATA2L
C11orf49
TTC30B
ZBTB46
KLHL18
KIF9
TPM3
PPAN-P2RY11
PPAN
ANGPTL6
PBX3
CRNKL1
CFAP61
PUM1
SF1
TTC7A
MCFD2
COPS3
FAM187A
EFTUD2
CCDC103
MBD4
IFT122
ANGEL1
RNF139
TTC23L
CD209
CFAP251
PITPNM1
TMEM9
ZC3H10
RPL41
CFAP91
PROSER3
HSPB6
HSPH1
OVCA2
MCM7
AP4M1
SDCBP2
PELI1
THNSL1
DMWD
ORAI3
JUNB
PDCD6
DHX40
SPATA17
GPATCH2
TM9SF1
ZNF324B
CCDC30
MORN3
PRR3
GNL1
MAPRE3
HMGCS1
DNAJC16
CASP9
WFDC3
DNTTIP1
TMEM67
FXYD7
THAP10
LRRC49
CCPG1
C15orf65
DYNC2I2
DSTN
BFSP1
DYRK1B
RRP12
IPO11
POLL
DPCD
ENDOV
LENG1
UVRAG
MOCS3
DPM1
IQCH
AAGAB
SYS1
PHOSPHO2
CCDC173
OTUB1
RHPN1
MEAK7
PTH2
GFY
PIK3R2
TPCN1
IQCD
ACAP2
TP53BP1
ZNF497
GTF3C4
DDX31
TSPAN19
LRRIQ1
ZSWIM1
SSBP2
CALR3
C19orf44
IFT22
ZBTB48
ZNF184
TOR2A
LINS1
ASB7
WIPF2
UBXN2B
C7orf50
PRKAR1A
FAM183A
PPP2R1A
MOK
DAAM1
PTPN1
NDRG4
PCF11
NCOA5
CYTH2
DYRK3
STUB1
JMJD8
HSPBP1
BRSK1
FZR1
CCDC34
CSNK1G1
RTF2
NRSN2
CEP112
NME9
PRKCSH
CCDC151
BCL2L1
MOB3A
IZUMO4
MORN4
CTU1
SLC37A1
RSPH1
ZNF287
STK11IP
POLRMT
E4F1
DYRK1A
DNAAF2
C9orf139
ABCA2
C2orf73
ZC3H3
MRPL10
LRRC46
SPATA2
ZNF594
CCDC184
CRIP2
MRPS21
SRFBP1
PTMS
TMEM53
ARMH1
IQUB
CFAP54
EFHC1
MFSD4B
LRP4
PARS2
TREX1
SNRPF
ZSCAN5A
RFX1
MAPK10
CFAP73
KAAG1
DCDC2
TTC30A
PRDM4
TAF6L
NR2F2
TRMT5
SLC38A6
NEK10
PRR29
MINK1
FAM214A
SAXO2
EFL1
CCDC74A
FHAD1
MUC1
MAP1LC3A
CRIP1
LRRC56
HRAS
MARCHF9
CDK4
ITGB3BP
EFCAB7
NUDT2
KIF24
DYNLRB2
RSPH14
RAB36
POFUT2
TSPYL4
DSE
PPM1E
H1-10
MAN1B1
CIPC
RNF32
FOXN2
DNAH7
PIM2
NUMA1
LRTOMT
PPP1R12B
U2AF2
SH3GLB2
PRKCG
SMG7
VAT1
RND2
RHOD
DLG4
ACADVL
GPR107
HSPA12A
ENO4
ARRDC4
YWHAQ
PPP1R21
MVK
ZFHX2
THTPA
HIC1
TMX2
MED19
TXNDC17
KIAA0753
NXNL2
C3orf49
SPOP
STK32C
LRRC27
ZNF574
GRIK5
FOXJ1
CHCHD3
PAK4
TOB1
CENPH
CEP41
POMT2
GSTZ1
RFC2
PICK1
PDE4A
CYP46A1
KRT8
CCDC175
THG1L
TSEN2
XPR1
MAFA
TSNAXIP1
RANBP10
AKAP11
YIPF3
POLR1C
MIB2
ZNF623
COPB2
SEMA4B
METTL15
KIF18A
EFCAB12
ARMC3
RUNDC1
PTGES3L-AARSD1
PTGES3L
LOC728392
RASL10A
GAS2L1
EFNB3
DAD1
RNF5
AGPAT1
EBNA1BP2
CFAP57
TMEM107
PIN1
FLT3LG
HMG20B
RALB
SYVN1
INTS8
ZNF862
FAM204A
ARL13B
MZF1
WDR13
TH
CELF6
WDR54
C2orf81
GOLGB1
NDUFA5
SHOC2
BBIP1
SLC4A8
DYNC2LI1
WDR73
NMB
HMGCR
MSMO1
USP30
ALKBH5
BAIAP3
RUFY1
SLC25A25
GTF2IRD2B
ELMOD2
HSPA1B
CLBA1
ARID4A
DNAH6
TMF1
STOML2
C2orf50
YWHAZ
ATG9B
ABCB8
PRMT5
RNF40
CCDC189
XRCC1
PINLYP
LGI1
G3BP1
CPLANE2
COG7
KLHDC10
PANK2
CFAP43
ERICH6
MPZL3
ATP1A3
CCDC8
OPRL1
FAM185A
ZNF768
TUBB3
PPP1R11
AHI1
NIM1K
MLEC
IPO4
MYADM
DYNC2I1
C1orf159
SWSAP1
TRIT1
TEKT1
SPATA13
SIX3
NSD3
LETM2
ARFGAP1
RIN1
C16orf46
KIF23
HYDIN
BDP1
CHN1
RBBP6
IQCC
DCDC2B
TBCEL-TECTA
TBCEL
CACYBP
CCDC130
L3MBTL2
C16orf71
ANKS3
MED25
FUZ
IFT172
ARMC2
STX8
CFAP52
TMEM88
NAA38
CYB5D1
TRIM36
KMT5C
MED9
OSCP1
PREPL
CAMKMT
FSIP1
ACTR6
YWHAE
TENT5C
PHTF1
CYB561
PODNL1
DCAF15
NEMP1
IQCE
BRAT1
BBS1
BRCA1
TOM1L2
DRC3
CACNA1G
RFX3
TRMT12
CFAP58
PEF1
TMEM231
PPP1R37
LPIN2
GET3
FBXL13
ARMC10
RASGEF1B
CATIP
E2F3
RPL30
TEX264
NDUFS3
KBTBD4
ADGRA1
SPEF2
ARL6
TAF6
CNPY4
NQO1
CHD4
WDR35
MARK3
STRN4
FKRP
RSPH4A
SPAG8
HINT2
RPS27A
CLHC1
TMEM91
B9D2
FAAP24
CEP89
CCDC39
SRSF7
PFDN5
MYG1
TMX4
MIER1
DNAI4
OXNAD1
DPH3
C17orf97
B9D1
NAV1
MAP9
UBE2O
AANAT
GNB2
HEATR6
UBXN6
TSGA10
C2orf15
RTN4RL1
SPATA33
WWOX
ANKRD42
CYC1
CIB4
NDUFA8
MORN5
COQ7
CCDC146
SF3B5
RPP38
SPICE1
ITSN1
CRYZL1
TTF1
CFAP77
DNAJA1
APTX
LRRC6
KIFBP
SSC5D
NAT14
RUFY2
FAM227B
DTWD1
CAND1
DBN1
CARS1
LMAN2L
KATNIP
GTF3C1
EFHD2
JUN
WDR93
PEX11A
EOLA1
DCP1B
DNAJC1
STXBP4
COX11
POLR3GL
ANKRD34A
TPGS1
ELAPOR1
C1orf194
TNPO1
TRAF4
TRIQK
LSM14B
SLC7A6
CCS
CCDC87
CFAP45
PCNX4
SFXN2
ARL3
MRPS2
C9orf116
ZNHIT1
PLOD3
RALGAPA1
UBL3
ERICH2
CFAP20DC
RNF223
KATNAL2
FAM234A
LUC7L
NACAD
FOXO6
PCGF1
LBX2
TASP1
CCDC74B
POLR3H
CSNK1G2
FANK1
DYNLL1
KIF3B
LZTFL1
MICOS13
HSD11B1L
SLC27A1
KIF6
RASA3
NUCB2
DHRS12
ZNF875
MLF1
IDS
P4HA1
HSDL1
DNAAF1
TXNL4B
DHX38
SPG21
HIGD2B
BBS4
PNP
SREK1
FER
ID1
SDE2
INTU
IFT140
CRAMP1
FAM161B
COQ6
PRORP
PPP2R3C
WHAMM
GH2
CSH2
TIGD4
ARFIP1
PATZ1
ZNF48
SLC25A46
SNIP1
DNALI1
FOXN3
AP1M1
SYT6
TOGARAM1
KLHL28
CCNL1
DYNC2H1
PSMA5
VTA1
NMBR
FBXL16
SRF
FKBPL
ATF6B
LRRC73
BTBD3
TOR3A
RALGDS
IFT57
AXDND1
EFCAB10
QTRT1
PIFO
TECR
DNAJB1
TULP3
EIF2S1
ATP6V1D
HNRNPF
CPEB4
SPEF1
KNCN
USP54
PLEKHG5
SH3BGR
LCA5L
AGPAT5
BRMS1
B4GAT1
WEE1
CLCN3
TCTN1
OTUD5
ERCC1
YOD1
PFKFB2
PHC1
CNOT8
ZNHIT2
FAU
PLEC
ZFYVE28
CFAP99
ETFRF1
CFAP94
PEX16
LARGE2
BCLAF1
ZP1
PGD
L3HYPDH
JKAMP
GPR137
BAD
DUSP6
CEP152
OSBPL2
CBX8
TPPP3
ZNF324
ZNF446
RAD23B
SRSF1
TRAK1
TBC1D16
CCDC40
ABHD2
CDH4
ARG2
ZNF444
PRKN
PACRG
LRGUK
THOP1
SGTA
RAB11FIP2
SMIM5
ARF3
SLC25A3
TMED10
BSG
KNTC1
PKP4
CCDC148
AJM1
SFR1
MICOS10-NBL1
MICOS10
WBP1
INO80B
KIF14
IDH2
TEX2
ZNF627
TBC1D32
GPR68
NAA60
LMBRD1
RXRA
KCNK15
CFAP126
TTLL5
ERG28
TADA2B
CCDC96
BRD2
UBXN11
ACOX3
PPP1R12C
MAP3K14
LMTK3
TAOK2
MNS1
POLD3
EHD1
WARS2
KDM6B
TMEM31
PLA2G2A
BBS9
FAM227A
CBY1
SHQ1
C7orf57
FAM151B
NPHP1
EIF2S2
NET1
AP2S1
KANSL3
FER1L5
SYT5
RPN1
ADCY5
PPP1R42
IGFBPL1
WDPCP
MDH1
PNKD
RIMS4
ZNF76
THBS3
MTX1
ALS2
C4orf48
CCDC107
RPF2
TMED8
SAMD15
HS1BP3
DUSP3
CFAP97D1
LILRA5
UBN2
PALM3
MSH5
CLIC1
BBS12
HMGN2
AOPEP
HNRNPH2
TCTEX1D4
BTBD19
IQANK1
FAM83H
CYRIA
AP1G2
CLUAP1
C16orf90
LEKR1
SMC1A
RIBC1
KNOP1
IQCK
SLC25A14
MORN2
DHX57
IFT81
FAM214B
ZNF84
WIZ
WDR27
C6orf120
NUDCD1
BTRC
GNG3
BSCL2
CFAP298-TCP10L
CFAP298
DNAH2
TNXB
C8orf37
ZBTB40
FBXW7
MPP7
AGTRAP
HPCAL4
NUP62CL
DNAAF6
PPP1R32
CDC37
FANCI
CEP162
SWI5
GOLGA2
GSG1
ARL4A
ITFG2
SPN
TCTN2
IL15RA
MIA3
TEDC1
SYBU
STPG1
NIPAL3
DUSP18
GLRX5
ESRRA
SLC35E4
SF3A1
CCDC157
PER2
CAMK2A
TRIM2
TUBE1
FAM229B
REM2
GAS8
DBNDD1
CCNB1
DCAF12
CHCHD5
CASKIN1
IP6K1
H2AP
ZNF101
ATP13A1
TRIM37
MPC2
DCAF6
NUDC
CFAP69
TMEM209
SSMEM1
PSMB5
ZBTB22
TAPBP
MED31
C17orf100
TNKS1BP1
ZNF709
RGS3
CDC14A
NBR1
PSMB7
IRAK1BP1
SPATA24
STX12
UBB
DERL1
NME7
BLZF1
RTL5
RPS6KA5
DGLUCY
SIK3
MX2
MYCBP
RASGEF1A
KCNH3
TCTEX1D2
C12orf71
TSKS
AP2A1
PLEKHG1
CATSPERG
ALPK3
C7orf61
ULK4
USP2
MARCHF10
RAVER1
CCDC13
GEMIN8
CEP135
CCDC113
CFAP157
GRWD1
RGS16
EIF3L
ANKRD54
RNF141
PRRG2
NOSIP
AKAP6
PRUNE1
MINDY1
ZNF831
PLXNB1
RARA
RAD50
TRUB2
COQ4
RPL22L1
TRIP12
FBXO36
FAM161A
SUGT1
GNL2
PIBF1
DIS3
ARHGDIB
DNAJC10
SPCS1
GLT8D1
FAM86B1
PACRGL
UPK2
NPAS4
THSD4
MYPOP
RHBDL1
E2F8
RP2
MKS1
SLC8A2
NUMB
SPATA4
GOLPH3L
WDR19
FAM104B
RGL1
ARPC5
DNAJC24
DCDC1
SNAPC1
MEAF6
PPM1M
LYRM4
FARS2
FAM110A
PCOTH
MIPEP
LBHD2
GATA2
GTF2E2
KIAA1841
NEK11
ASTE1
LRPAP1
ABI2
FLACC1
ATAD3A
SPOCD1
ZNRF1
H3C13
H2BC18
REPIN1
SARAF
DNAL1
SPATA46
C1orf226
TTC8
AMZ2
TMEM232