ChIP-Atlas: Target genes

Potential target genes for CDK7

Query protein: CDK7
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX264463 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK7's Target genes

◢ CDK7: Average

◢ SRX1880280: Jurkat

◢ SRX398095: Jurkat

◢ SRX668243: Jurkat

◢ SRX668244: Jurkat

◢ SRX8202281: MCF-7

◢ SRX264462: MM.1S

◣ SRX264463: MM.1S

◢ SRX264464: MM.1S

◢ SRX447601: MM.1S

◢ CDK7: STRING

KIF5C
RGPD2
RGPD1
MTRNR2L9
MTRNR2L8
MTRNR2L2
MSH3
DHFR
EMILIN2
MTRNR2L10
MTRNR2L1
NGB
MTRNR2L6
C1orf198
PTPRN2
DUX4
TAF12
PARP16
WDR74
STX5
PTPN6
C12orf57
EAPP
KIF2C
TMEM107
POLDIP3
SIRT4
TTI2
CCDC200
HERPUD1
HMBS
H2AX
DPAGT1
H4C6
H3C6
H1-3
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
H1-2
DNAJB4
MKNK2
H2BC5
H1-4
SAR1B
UBE2S
H4C12
H4C11
EIF4A2
RCC1
H4C3
H1-6
SRSF6
H2BC15
H2AC15
H4C9
TSEN34
BTG1
NPAS4
H2BC11
H2AC11
H3C8
H2BC10
AMD1
RPL3
UQCC3
LBHD1
H2BC4
H2AC6
CSKMT
C11orf98
H4C2
H3C2
H2AC4
ANP32E
H2BC14
H2AC14
H4C8
RPLP1
PRDX1
COPS4
NDUFAF1
H2BC21
H2AC21
H2AC20
H3C4
RBM34
GADD45B
SRSF2
MFSD11
GAPDH
IER5
PARP2
CCNB1IP1
GET4
TUBB4B
STPG3
FAM166A
H4C1
SFPQ
LAMP1
C15orf39
H3C1
H1-1
OAZ1
KAT6A
AP3S2
WASHC2A
H3C13
H2BC18
H2BC12
H2AC12
MRPS18B
ATAT1
ZBTB4
SLC35G6
POLR2A
SKP1
H4C5
H2BC7
H2AC7
WASHC2C
H4C4
ZNFX1
H2BU1
H2AW
HEXIM1
MRPL39
TOB1
NR1H3
ACP2
TUBA1C
H4C13
H3C11
H2AC16
H1-5
RPS27
RAB13
PBLD
HNRNPH3
H2BC6
MAT2A
SLC3A2
GTF3C3
C2orf66
ZBTB37
ZBTB11
RPL24
RPS12
H3C10
H2BC13
H2AC13
CHEK1
NDUFS2
ADAMTS4
TFRC
PABPC4
ERN1
SRSF3
RPL23
RPS3A
ZNF358
MCOLN1
WNK4
VPS25
ZNF574
GRIK5
EEF1A1
B2M
WDR1
H2BC3
DNAJB1
H2BC8
H2AC8
H4C7
CD68
TENT5C
PTMA
HSPA8
CXCR4
NQO2
BRD2
MTHFD2
PABPC1
CCNC
TATDN3
NSL1
RPS6
RPL36
MICOS13
HSPA1B
HSD11B1L
ZC3H10
RPL41
GTF2H2C_2
MNAT1
H1-10
HNRNPH1
C12orf65
RPS7
RPL31
SLC30A1
DNAJA1
APTX
GTF2H2C
CCNL1
RPS3
MITD1
RPS11
RPL13A
H3C7
TPI1
SPSB2
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
SOD1
TRA2A
GBA
SEPTIN7
RPLP0
GCN1
ZNF124
ZNF106
SNAP23
ARL15
TBRG4
RPL13
ZBTB45
NPM1
PPM1G
MCL1
ICE2
MBD1
CXXC1
SOCS1
H3C12
H2BC17
H2AC17
SPRTN
EXOC8
SLMAP
TUBA1B
SDE2
PLEKHM3
EIF4A3
MRPL1
EIF2D
USP21
UFC1
DDX50
MAMDC2
ALG10B
RRP15
OAT
XRCC5
EIF4A1
RACK1
INTS5
GANAB
NXF1
LRP6
TBL3
RPS2
RNF151
SPTAN1
CSRNP2
SSBP1
SLC25A4
PRKAG1
HSP90AB1
RPS8
MTF2
ABTB1
UNK
H3-3B
RPL22L1
SOX15
MPDU1
LOC100996842
WWP2
NOB1
P2RY11
EIF3G
JUND
IQCN
ZNF207
C17orf75
SRSF7
NUF2
STX18
ZNF484
BMS1
RPS20
NOM1
DNTTIP2
FUS
USF1
TSTD1
EIF1
SGK1
POLR2J3
CRTC1
TBC1D19
NUDT1
MRM2
MAD1L1
COMMD4
NUP188
DOLK
TJAP1
LEMD2
NGRN
NUP133
RPL34
RPL29
HEXA
TRIM28
SOX4
NOP53
MT1X
SYP
RBM28
DRAP1
C11orf68
LAX1
ETAA1
DDX1
DUSP1
SFR1
IER5L
TOR1AIP2
TOR1AIP1
TRAF7
RAB26
ZNF770
C19orf48
SELENOT
CCDC124
ACTB
SNRPE
ACSL3
TAF4
SSBP2
MARS2
NME1-NME2
NME1
RSL1D1
NDUFB5
MRPL47
IRF4
IDH3B
TSPOAP1
KLHL20
MIS18A
PSMB4
ANAPC5
GTF3C5
GTF3C6
RPS5
ADI1
PRKCSH
CCDC151
ZKSCAN8
PSMF1
TMEM238
TMEM190
RPL28
RRP1
ZFP36
PLEKHG2
TMEM209
SSMEM1
ZC3H6
GTF2A1
CCDC174
TTC23
LRRC28
SNRPC
PPM1D
NUFIP2
RNF225
CALM1
RPL10A
RAD23A
MRPL27
EME1
CALR
FZR1
DOHH
PHB2
DDX6
DRG2
TMEM18
SF3B3
FAM207A
COG4
TOB2
GTF2H2
GNPAT
C1orf131
MRPS18C
HELQ
NUGGC
ELP3
H3C3
ZNF768
ZNF747
CPPED1
NDUFS3
KBTBD4
FAM180B
TSR3
ID2
GNPTG
TAF15
ZFAND2B
NUP107
MAPK6
H2BC9
TMEM101
TUFT1
KCTD5
RPL26L1
PACSIN2
ADM
NOTCH2NLC
SURF2
SURF1
RPL7A
MED22
TOMM22
ALDH9A1
RPS28
NDUFA7
NUP54
RPL5
KANSL2
NASP
DCP1A
WDR4
ZNF830
CCT6B
FTL
INTS12
GSTCD
COMMD1
ATP5PO
NFKBIL1
DDX39B
ATP6V1G2
INSIG1
BSG
RPUSD4
FAM118B
TANK
POLR1E
GTF2B
INTS6
ZC3HAV1
TRIP4
PCLAF
YWHAE
NUP214
MBTPS2
FAM174C
CIRBP
TAF1D
C11orf54
FANCD2OS
BRK1
PPOX
EFCAB2
PPP1R8
TMEM262
ATF3
OSCAR
NDUFA3
RAD54L2
TIGD5
RPS15A
EEF1D
USE1
SLC35F5
TRDMT1
NDUFAF3
IMPDH2
DALRD3
SEC24C
RPL10
POLR3B
NARS1
CBFB
DHX9
AFTPH
RPP25L
DCTN3
TOLLIP
ANKRD40
STAT1
HASPIN
N6AMT1
TSPAN17
TOMM7
CD81
PPP1R15A
PLEKHA4
ZC3H12A
RPS15
ATR
SF3A3
CLCN7
ZCCHC4
CDC37L1
POLA2
SUPT7L
SLC4A1AP
RPL3L
NDUFB10
GAA
ZNF3
COPS6
AAR2
RBM8A
PEX11B
NELFA
TRA2B
RHOB
GNG3
BSCL2
PRDX3
NAXE
GPATCH4
C16orf89
TAB1
RPL6
PTPN11
NOTCH2NLB
MYO9B
HAUS8
ATP6V0C
AMDHD2
AGK
EIF3E
METTL9
CDKN2AIPNL
SAP18
RPL15
NKIRAS1
PRRG2
NOSIP
MCU
EEF1G
ANKRD26
RBM12
CPNE1
VPS33B
KCTD13
PPP4R3A
TEN1
METTL3
CRADD
ACOX1
TTYH2
RPL38
CCT4
CHAC1
RPL27A
H2AZ1
DNAJB14
CSNK1A1
NBPF1
ITPR1
RPL37
RAF1
POLR2C
CARD6
THOC1
TXNDC15
TEKT2
ADPRS
SPPL2B
LSM7
XRCC2
VPS52
RPS18
B3GALT4
POLG2
DDX5
PIP4P1
ZSWIM1
SUMF1
SPATA25
NEURL2
MRPL15
MED18
CTSA
SMARCC1
LRRC37A3
VAMP1
UBL7
SNRPB
TMSB10
PSMC6
LUC7L3
NOL11
CNBP
NOTCH2
RPS14
MTPAP
CDKAL1
RPS4X
PEX3
ADAT2
SLC38A2
MYH7B
GSS
EIF2B5
USP31
RNF19B
VPS72
PNP
PIP5K1A
NSFL1C
NDUFAF5
ESF1
DPY19L4
IFRD1
TEDDM1
SPC24
GLUL
TUBGCP3
PRR5L
EMC4
COMMD9
ZWINT
RRP1B
HSF2BP
TMEM167B
PARK7
SUPT5H
RPS16
KNSTRN
POLD1
NR1H2
BUB1
ATN1
SLC25A51
WDR36
CTSC
SNRPD1
LSM8
TEFM
KDM2A
NFAT5
BPGM
MTERF1
ZNF296
LTN1
GEMIN7
ZMPSTE24
TMCO2
GPN1
CCDC121
MRPL3
CDK5RAP2
PPP1CA
POLR2J
TUBD1
SQSTM1
RPS6KB1
NDUFA12
TOMM40L
PPP6R1
APOA2
KLF6
HNRNPAB
AP5Z1
SSNA1
EIF3A
ANAPC2
ASH2L
RPL11
AZIN1
UMPS
TRPM7
RPS23
KNTC1
ATP6AP1L
AQR
LRRC47
ACYP2
MRPS35
PDE6D
FARSA
COPS7B
FAM133B
ANKRD31
ARPC1A
UBA2
MYC
POLR3D
MRPL45
COQ9
CIAPIN1
RPS26
CITED2
CEP20
RPL17-C18orf32
RPL17
C18orf32
RPL37A
THOC5
RPL12
LRSAM1
TMEM242
TMCO1
RMI1
P4HB
HNRNPK
YWHAH
DBF4B
C22orf24
ZNF148
PSMD5
ALKBH3
MED17
ATF4
CETN3
TLCD1
RPL23A
RAB34
PROCA1
NEK8
INTS2
BAX
ALG1
SAXO1
RRAGA
DLAT
TEX9
RAD9A
PEX12
AP2B1
NIPBL
DUSP5
RPTOR
SPNS1
LAT
RACGAP1
GMFB
COA1
MAGOHB
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MLLT11
GABPB2
SBNO2
EID1
TCTEX1D2
DYNLL2
RXFP4
FAM98B
MFF
RBM14-RBM4
RBM14
VAMP4
SLC16A7
RTF1
PFKFB3
KLHL7
ATP6V0D1
AGRP
MRPS14
KLHL6
KHDC4
UTP11
UCKL1
TTC26
FHL3
ACAD9
PPDPF
UBE2D3
SEC62
BLOC1S6
NOXO1
NOTCH1
DPY30
TMEM68
TGS1
STAU1
SLC35B2
RETSAT
ACBD6
PTPA
ERLIN1
CRAT
RPRD2
HNRNPDL
ENOPH1
TAOK1
USO1
BZW2
ANKMY2
MATR3
MAML1
FBXO38
DDX19A
ZNF425
ZNF398
RPL32
UBA52
RBM22
COX10
MEAF6
TRMT44
ACOX3
KLHL12
TMEM199
SEBOX
POLDIP2
BNIP1
TNRC6B
DDX47
ATP6V1G1
TYW3
SLC39A13
PPIA
CRYZ
ZCWPW1
PPP1R35
MEPCE
PUM3
TRIP6
SRRT
CARD8
WDR33
MAK16
PMPCB
NUP205
GDF5
DEDD
CTNNB1
CEP250
EIF4G2
PNRC2
LRCH3
IFNAR1
EIF4G1
NDUFB1
MTREX
DHX29
CPSF2
SUGCT
MPLKIP
B4GALT3
MRPS9
METTL18
C1orf112
DNA2
PTCD2
PTBP1
MRPS27
AHCY
NFX1
MAP2K7
POLR2H
MED23
ENPP3
CLCN2
ZCCHC10
PSPC1
ITFG2
KATNBL1
VMO1
RAB7A
PSMB6
GLTPD2
TSEN15
TNFSF9
PHF21B
IPO9
DMAP1
YEATS4
SNRNP70
GTPBP6
EIF3D
ZNF92
SLC23A3
NAGPA
LRRC10B
CDK19
TSSC4
SZRD1
COIL
SLFN11
ZNF627
NUP62
IL4I1
HSPA5
ATF5
ZNF256
DSTYK
ZNF589
NDUFS7
MAD2L1BP
GTPBP2
ZNF517
ZNF34
RPL8
ATF6
ZWILCH
ZNF581
ZNF580
TK2
SNAPC5
RPL4
DDX27
CKLF-CMTM1
CKLF
ANKRD17
GRPEL2
NOTCH2NLA
HNRNPA1
CLK1
CBX5
MED28
FOXRED2
RAMAC
SLC27A5
MYBBP1A
HEXIM2
GGT6
BUD13
ZNF397
TDP2
ACOT13
TSR1
TCF19
SGSM2
SECISBP2L
POU5F1
MPHOSPH10
MCEE
CCHCR1
RFX3
IPO11
DIMT1
SNX18
GPATCH1
GNG14
FOXJ3
AMACR
DDIT4
DCAF8
TUBA1A
SLFN14
TSPYL4
DSE
CREBL2
NUP160
CREM
COMMD2
BCL2L13
ATP6V1E1
ZNF408
SLC24A1
INTS14
ARHGAP1
MCRS1
ZNF675
ZMAT2
UBE2Q1
RPL35
HARS2
HARS1
CHRNB2
ARPC5L
TAX1BP3
RPS24
POLR3A
EMC6
ALG10
SDHAF2
CPSF7
VPS4B
VTA1
SPTLC1
NMBR
ZNF789
STRIP1
SPRYD4
ATP5MF-PTCD1
ATP5MF
TMEM41A