ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX13363948: 12Z

◢ SRX13363949: 12Z

◢ SRX16750012: 12Z

◢ SRX16750014: 12Z

◢ SRX16750018: 12Z

◢ SRX16750019: 12Z

◢ SRX16386912: 293

◢ SRX3010078: A549

◢ SRX3010079: A549

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX3010139: GM12878

◢ SRX3010140: GM12878

◢ SRX10475250: Hep G2

◢ SRX10475251: Hep G2

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX15039987: MDA-MB-231

◢ SRX15039988: MDA-MB-231

◢ SRX15039990: MDA-MB-231

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX8907433: Rh-5

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX8907438: SCMC

◢ SRX15039983: T-47D

◢ SRX15039985: T-47D

◢ SRX15039986: T-47D

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

SPAAR
HRCT1
CCN4
CCIN
RECK
MTRNR2L2
MSH3
DHFR
SPAG8
HINT2
MTRNR2L8
MED1
CDK12
STOML2
PIGO
FAM214B
TBC1D4
SIT1
CCDC107
ARHGEF39
MED23
ENPP3
UBE2F
VMO1
PSMB6
GLTPD2
PEX3
ADAT2
VPS37D
PTPRF
RASA2
MTRNR2L1
CD79A
ARHGEF1
ZBTB40
FAM166B
LPIN1
CLTA
RPS7
TRIP4
PCLAF
RGPD2
RGPD1
RNF216
INTS12
GSTCD
TRMT10A
MTTP
DMAP1
ATP5MC3
TESK1
MRFAP1L1
BLOC1S4
UTP25
TEX46
KDM1A
IFI35
RPL27
H4C3
H1-6
CLP1
ZDHHC5
COMMD2
AKIRIN2
UBE2L3
PPP1R11
POLR1H
PAXX
LCNL1
CLIC3
AURKAIP1
TMEM262
RUSC2
GTF3C3
C2orf66
FCGR3A
TOMM7
AHCY
RMND1
ARMT1
NFE2L2
KIF5C
CCDC200
NLRX1
SLC35E2B
TLN1
CREB3
SIRT5
AP2A2
LRRC37A3
ARL14EP
SSBP1
TOP3B
ZKSCAN8
CLPB
GNE
SLC35E2A
DNAJC19
ZCCHC4
PDCL
CARD14
PHKB
ITFG1
PSMF1
TSSC4
DUX4
TRIM55
RGP1
MSMP
GBA2
CYRIB
GALT
IL11RA
NUGGC
ELP3
CD36
NUCB2
UBE2V2
VARS2
GTF2H4
EREG
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
DCTN3
TRAPPC9
FAF1
CDKN2C
SNRPB2
SYT5
ZFAND1
CA9
CIZ1
COX7A2
OSCAR
NDUFA3
MT1M
MT1E
NCOA5
ATR
NDUFS7
KIF3C
TENT2
EIF3E
ZNF335
EPRS1
RBBP5
MRFAP1
C9orf131
MRPS14
MRPL45
RNF24
DPY19L4
ZSCAN9
UBFD1
EARS2
OLFML2A
NR6A1
KIF3B
TBC1D19
CRYAA2
CRYAA
WDR74
STX5
WDR43
SPHK2
RPL18
FAM83E
CABLES2
DYM
GTPBP6
GBA
GPCPD1
TMEM79
SMG5
NPR2
GTF2H2
GTF2H2C
SLC39A11
ENGASE
MRPL58
ERCC6L2
RXRA
SLC35B1
LFNG
PANK3
PRDX1
PPP5D1
CALM3
CTNNBL1
AP1G1
MTERF1
TEF
ZER1
CRLS1
PRMT1
AARS2
STX16
TACO1
INKA2
DSTYK
DDX20
FRG2
LCN12
FBXW5
C8G
RPS14
VCP
FANCG
TGM3
SF3A3
FAM8A1
PLEKHM3
ZMAT2
HARS2
HARS1
HIBCH
PAXBP1
PLXNA1
RAC1
MELK
TRIOBP
REXO4
ADAMTS13
PGS1
MTF2
TPCN1
IQCD
EIF4A2
HEATR3
YWHAG
DPH5
AMZ2
CASC3
PRPSAP1
CST6
EIF1AD
BANF1
RAD52
MYCBP2
TMEM242
AP3S2
COMMD6
NFX1
COL23A1
CDK5RAP1
LOC730098
CCL27
NUDT2
KIF24
NOL4L
UNC13B
EDC4
RRAD
CIAO2B
CES2
CDH16
TPM2
CDC25B
CENPB
TTYH2
RPL38
CETP
DNM2
METTL21A
DRG2
DDX18
ACTRT3
RIN2
NOTCH2
SNAP47
JMJD4
ZMPSTE24
SLC28A3
KRT36
KRT13
RIPK1
UIMC1
CCNC
ADNP
IFNGR2
EIF3D
RRP15
FBXW2
MRPL39
MRPL35
IMMT
NDUFC2-KCTD14
NDUFC2
RGS20
TFB1M
EIF3F
ID1
MEX3C
TRIM65
MRPL38
POLG2
DDX5
CCDC88A
JAG1
PIH1D1
ALDH16A1
PPIL3
NIF3L1
ZDHHC24
ACTN3
ZNF638
TOX2
MVB12A
FOXK2
ZKSCAN2
BSPRY
NDUFAF4
KLHL32
ZNF165
OR1F12
MITD1
POLR2G
ZBTB3
ASXL1
SLC25A10
MRPL12
TMEM222
SMARCD2
CCR7
EED
YTHDF2
NDUFB8
HIF1AN
SMU1
STAT3
MRPL44
RPL37
CARD6
RIPK3
ADCY4
ZSCAN16
ZFP36
PLEKHG2
ATF2
NOL11
MRPL3
NOTCH2NLC
SP2
PDCL3
FKTN
KCTD2
ATP5PD
PAFAH2
PDCD6
RFC5
ZNHIT6
WDR70
NUP155
NT5C
NMNAT1
LZIC
GORASP2
TIMM9
KIAA0586
RBM47
PCCA
ZNF8
SLC12A6
NUTM1
NOP10
MRPL15
FXN
UBE4A
MDM4
NUDT9
RNFT1
PRLR
DNAJB5
RSPH6A
POLR2M
P3H4
FKBP10
JRK
PSCA
H4C12
H4C11
H2BC14
H2AC14
SH2B1
SMCO4
DOT1L
LUC7L2
PRELID2
EPHB4
UCHL3
CCL24
SNRPE
TXNDC11
CRTC1
TANK
ZNF461
PLEKHN1
PERM1
RAB40B
TAF12
LMNB2
MSL2
CRH
LY6E
C8orf37
PKIG
RGS14
LMAN2
COPS7A
SYP
PRICKLE3
DCP1A
ADM
RPL10A
ART1
ECM1
ELFN2
WNK4
VPS25
RBIS
LRRC59
FAM227B
DTWD1
LOC102724770
DGCR6
FRG2C
MAMDC2
KXD1
ZDHHC12
MYNN
RFX1
AFAP1
C1QTNF8
GAS8
NUCKS1
CACTIN
SGSM1
PHRF1
MLLT1
SOGA1
CNOT3
MLX
HSD17B1
COASY
TOR1A
C19orf25
ATG16L1
SLC29A3
SPATA2
POLR2K
FBXO43
TRMT1
NACC1
METTL14
MUC20
SORBS1
EIF3C
TKT
ADRM1
TERF2
MUC3A
HLA-E
SRRD
HPS4
EIF3CL
PLIN3
PRMT5
TJP3
SETD1A
ORAI3
ARNT
SNX16
GADD45B
PSMD9
HPD
ADGRG1
ZFP36L1
EPS15
PAK4
CEP164
ZCCHC14
KIF16B
SLC39A10
SRXN1
ISOC2
SWSAP1
DDX17
AP3B1
EAPP
UEVLD
ADGRL1
PDE4A
BORCS7
SYNJ2
TIPARP
LTO1
CLK3
LGR6
HPS1
SLC25A16
DNAAF4
CAVIN1
PIGBOS1
PIGB
SLC30A6
BRAP
ACAD10
PTPRH
PDLIM7
ZNF77
SPAG4
UBOX5
FASTKD5
HPS6
ARMH3
PPP6R1
CPPED1
HNRNPA2B1
CBX3
MEGF8
ECSIT
CNN1
ZNF131
CHST12
CCNT1
TAF1C
ADAD2
GOLGA7B
SCARB1
UNC93B1
ALDH3B1
PRR5L
COMMD9
LIME1
PRX
AKNA
TLE2
DIO1
KIF2C
MKNK2
SRPK1
ATF6
GTF2H5
CAMK2N1
ZNF184
TGM1
RABGGTA
CCDC22
CACNA1F
SMG8
SRCIN1
SPATC1L
SETD1B
GLIS2
PRRT3
RIOX1
USP35
KCTD21
TIA1
PCYOX1
F2
SIRT4
TTYH3
PMEPA1
NEK6
TCTN3
RPL6
PTPN11
KDSR
ADAMTS9
COPS4
SMTN
NEURL4
ACAP1
ZNF436
DCDC2
SLC25A25
NAIF1
DYNC2I1
GPR137
B4GALNT3
GSN
LSM14B
RDH13
NPR1
ILF2
KCNK4
CASTOR1
RAB2A
ERCC1
MEF2D
NPAS4
RAPGEF1
TRIM26
GALNT10
KRT19
KRT15
TDRD7
FBXL19
KANK2
UBXN4
RAB5C
MEGF9
SLC25A20
DUSP7
RBM4B
DUSP1
RHOD
GSTA4
RPS29
ATP5MC1
IRF2BP1
SLC44A2
EFR3A
OGFR
KANSL3
FER1L5
CLUAP1
C16orf90
TGM2
SERPINB1
STX6
NXPH3
NCAM2
PTPRN2
TCIRG1
NDUFS8
CSF3R
SCAMP4
ADAT3
NAE1
ARHGAP39
CLPP
MRPL54
APBA3
BAD
ELP5
CTDNEP1
ETFB
FMC1-LUC7L2
FMC1
LARP1
CHMP6
NEMF
ENSA
PITPNA
TUBA1C
FKBPL
ATF6B
PPP1R13L
POLR1G
LDLRAP1
GABARAP
IL32
EPOP
DAGLB
GADD45GIP1
TFAM
DLAT
SCML1
SNU13
GPR160
RAB11B
ARPC3
DTD1
PRR30
PREB
SRA1
SLC35A4
APBB3
H2BC17
H2AC17
PTPRA
TP53I11
PIP5K1C
SREBF2
NUP85
NBPF1
ATG4C
RAB14
ZNF555
PSMD4
LSP1
KLF1
GCDH
DNASE2
AP2S1
RPS6
TMC8
TMC6
WASF2
TP53RK
SLC13A3
KDM3B
RRP12
TEX19
TMEM161A
ICMT
HES3
MATR3
TNFAIP8L1
TM4SF19
AARSD1
NELFCD
CTXND2
MICALL2
DIDO1
MCC
ZNF234
ALDH18A1
BRMS1
RABGEF1
ATP6V0E2
ZNF687
POLG
CAPNS1
ICAM1
CDCA4
TTC38
PKDREJ
LY6L
EMC4
SLC38A10
TCF3
ST6GALNAC6
PHLDA2
ZBTB38
RNF114
RPS12
SYT7
CYLD
H1-2
KIFC3
SLC27A4
LSM5
AVL9
POFUT1
PLAGL2
CTR9
SMARCC1
XKR8
SEPTIN9
RPL36
MICOS13
HSD11B1L
KAAG1
CDON
TUFM
GNG7
KTN1
UBE2Q1
CHRNB2
STK10
EFCAB9
PARP2
RPL22
RNF207
PRR5-ARHGAP8
PRR5
TMEM107
MPZL1
GRSF1
SYT11
GON4L
RHOF
TK1
ZFAND4
HMGN4
SLC27A1
ZNF609
AKT2
MDGA1
GPSM2
SEMA4B
PTK2B
HOOK1
HSD3B7
NUDT3
SHFL
S1PR4
NCLN
VPS37C
ZNF500
PLOD1
HCAR3
HCAR1
AURKB
SYMPK
GRPEL2
FOXA3
NICN1
AMT
RGL2
PFDN6
TMEM214
SREBF1
RIPOR3
NEDD1
MFSD4B
GPS2
EIF5A
CORO1C
C1orf159
RPL37A
DPP9
H6PD
OR2B2
PCCB
NARS1
RNF213
TSC1
GFI1B
MTHFSD
NUF2
STX10
IER2
CCNB1IP1
HUS1
PRUNE1
MINDY1
WDR59
ZNF771
ZNF48
PTPN1
RAB4B
MIA
HAS1
COL21A1
RBM5
TAC4
SLC26A8
MAPK14
PDSS2
SULT2B1
ZNF485
DEF8
SMURF2
PHF23
DVL2
PPP2R2A
CDKN1A
OR2T1
ZSCAN25
PDLIM1
VKORC1
PRSS53
SPOCD1
WNT7B
POLR2J3
TNS4
CTDSP1
RIF1
TSACC
NCOA6
CCT3
NECTIN4
MTMR14
GEMIN6
MANBAL
FAM193B
ATF3
TRAF6
RAG1
ZBED9
SUOX
TRAPPC6B
PNN
IER3
FLOT1
SNRPC
KIAA0895
GPR84
ANLN
RCC1
FBXO46
EEF1AKMT2
ABRAXAS2
YEATS2
SDC4
HSPA6
ATP13A3
PLXDC1
RASA4
IQCE
HTRA3
DAZAP1
BRAT1
ZNF606
PTGES
PLD1
ARHGEF17
CYB5B
DHX16
EEF2K
ACOT9
NKG7
CLDND2
EGR1
PEDS1-UBE2V1
PEDS1
ARL2
DSCC1
SH3GLB2
INO80C
MIGA2
CAV3
YPEL3
TBX6
DAAM1
DPP3
HM13
HES7
ALOXE3
ERICH4
DMAC2
HAX1
SLC25A44
SARS2
MRPS12
LZTS3
HNF4A
TIGD1
EIF4E2
SEPTIN7
BCL9L
E2F6
ZZEF1
CYB5D2
USP45
TSTD3
DYNLRB1
STRN3
CKM
AP4S1
CNOT11
BDH1
SPC24
CSRP1
SLC2A4RG
RTKN
METRN
ANTKMT
PPP6C
COX5A
ADPRHL1
TOP1
MOB3A
IZUMO4
PARP16
USP42
TMEM41A
STRBP
B4GAT1
POLM
SOCS3
GRK6
PEX26
NACC2
ZBTB46
FAM161B
COQ6
POLDIP3
EEF1AKMT1
ARID1A
RNF187
TEX49
ECE1
TADA1
RAB8A
FCMR
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PITPNM1
GAMT
SEC14L1
MTRNR2L9
PRDM11
PRCD
CYGB
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
MEFV
LOXL4
TMBIM1
ZBTB43
C17orf99
SLC25A39
ACTL6A
RCE1
RBM12B