ChIP-Atlas: Target genes

Potential target genes for DNMT3A

Query protein: DNMT3A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3075718 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
DNMT3A's Target genes

◢ DNMT3A: Average

◢ SRX1916933: Epidermal stem cells

◢ SRX1916935: Epidermal stem cells

◢ SRX1916937: Epidermal stem cells

◢ SRX873804: Epidermal stem cells

◢ SRX8512760: HCT 116

◢ SRX10382406: hESC H1

◢ SRX10382407: hESC H1

◢ SRX10382422: hESC H1

◢ SRX10382423: hESC H1

◢ SRX10382428: hESC H1

◢ SRX10382429: hESC H1

◢ SRX10382442: hESC H1

◢ SRX10382443: hESC H1

◢ SRX873813: Keratinocytes

◣ SRX3075718: MCF-7

◢ SRX156111: NCCIT

◢ SRX156119: NCCIT

◢ DNMT3A: STRING

TNFSF13B
HGC6.3
GET4
CTDP1
RPL13
CPNE7
CHD8
ADCK5
RNF223
TSEN34
TMC4
MBOAT7
OR1F1
BRD3OS
WFIKKN1
METTL26
MVD
PAM16
OLFM1
SSBP2
IFITM10
CTSD
NELFB
PDX1
PLA2G6
VCX
RAB11FIP3
PTGES2
UNKL
LAT2
SLC19A1
KHSRP
TRIM72
PYDC1
ZHX3
PFKP
ZBTB37
B3GNTL1
CCDC197
TEPSIN
NDUFAF8
CNOT3
SBNO2
ZNF541
DEGS2
LRTM1
PTP4A3
GLIPR1L2
WBP1L
BAIAP2L1
OSGIN1
HEXIM1
GRTP1
TOLLIP
GFI1B
BCL2L10
RER1
MORN1
CCDC57
CRHR2
FER
GCNT3
NCALD
DENND1B
CXXC5
ELSPBP1
BSPH1
MAFK
BTBD2
MAS1
RAD23B
ANO7
STXBP1
SBNO1
CUL3
TP73
PHACTR3
TTC16
PTRH1
YJEFN3
OR4Q2
OR4K14
CILP2
RGS9
OR10R2
OR10K1
NBPF12
MKNK2
OGDH
PRR14
FBRS
KLHDC10
SPI1
MBL2
KANK1
PBX2
GPSM3
AGER
ULK1
HDDC2
ZBTB32
CREB3L3
C11orf95
FST
ETS2
PBX1
LITAF
PXDN
TECR
DNAJB1
SSH1
TRAPPC9
HRH3
USP22
C1QTNF7
IFI27L2
CEBPB
SP4
C4orf19
TMEM86B
MTRNR2L8
PRR29
KRBA1
UBE2L5
CIB3
USF3
ABR
CAPN12
COLEC10
SLC36A2
MB
SCYL3
GOLPH3
FAM89A
DEFB129
IQUB
SPATC1L
ZCWPW1
PPP1R35
MEPCE
VGLL4
PRELP
ZFPM1
NAPRT
MROH6
CMKLR1
KASH5
DICER1
RPL35A
IQCG
WEE2
JRK
ESRP1
FZD8
SPOP
SMARCD2
VCX2
LRRC15
CACNG4
RFC5
COTL1
SMARCD3
SECTM1
PTPN9
KCTD9
CDCA2
ACSF3
LOC102723971
UNK
H3-3B
B4GALNT4
KRTAP5-6
SETDB1
LOXL3
DOK1
TOR4A
SLC29A4
KLK14
SPRING1
RNFT2
MRPL58
CDK18
TMPRSS6
PKD1
ZNF605
HELZ2
FNDC11
SHISA9
ADI1
KRT1
MFNG
LARP1
MRC2
DPEP1
CLDN34
CALY
TMEM220
AFG1L
SMG7
FRMD6
BCAM
AHRR
LY6E
CCDC7
TIMM44
THSD4
INTS1
SYT3
CACNG6
ZDHHC6
VTI1A
SYNGAP1
PHF1
LOC101928841
CUTA
PHLDB3
KRT8
POU5F1B
VLDLR
CTDSP2
CORO2A
AK1
ACTA1
JAGN1
IL17RE
LPCAT4
UBAP2
FAAH
MSRB2
ATXN7
TRIB1
SUZ12
FIBCD1
KLK4
ZNF512B
SAMD10
PRPF6
PRLH
ARF3
CLN3
C10orf67
APOBR
PI16
GPIHBP1
SPEF1
CENPB
CDC25B
AGXT
TNNT1
TNNI3
MAP1B
NPRL3
NOTUM
MYADML2
OR10H5
OR10H1
CCL25
KDELR1
GRIN2D
CEP72
MC1R
NBPF11
FTCD-AS1
FAM174C
EFNA2
PELI3
ZBTB46
RAB6A
LRRN3
MTMR4
VCX3B
BDKRB1
PRRG2
PRR12
USP34
SLURP2
LYNX1-SLURP2
LYNX1
NBPF15
TLCD1
RPL23A
RAB34
NEK8
HOPX
BIRC7
C17orf58
SPIRE2
MTRF1
EYS
NCBP2AS2
NCBP2
P2RX1
MZF1
PRR5-ARHGAP8
PRR5
DSTN
BFSP1
SIGIRR
USP38
TTYH1
SLC8A2
CHAT
PDE7B
KNDC1
HMX1
PHF21A
UGGT1
RASSF2
LCN12
FBXW5
C8G
ZNF865
ZNF524
PRTG
FIZ1
ADAP1
APOH
CYB5R1
CBLC
CMBL
RNF43
EOLA2
PCNX1
SP3
KCTD13
FGF12
C1QTNF12
NOS3
TMEM65
WDR49
JPH4
TTYH3
RASA4B
DRC7
C17orf64
RSF1
AAMDC
TUBA1C
RECQL4
MFSD3
LRRC14
GPT
VCX3A
MECOM
LARGE1
ALKAL2
CABP2
TLK1
OTOF
MINAR1
ARFGEF2
OGFOD2
ARL6IP4
SLC6A18
BCAS3
CATSPERG
SNAPC4
PMPCA
ENTR1
UPF2
CAP2
TFEB
SNRPA
C19orf54
MBNL1
POLK
CERT1
SLC43A2
USP32
IGLON5
RASA4
CADM4
MLXIPL
C16orf72
MAML3
HECW2
CCDC8
ESPNL
DACT3
ACTR3
MEAK7
NIM1K
NAV1
DNAJB8
CRELD2
ALG12
URGCP-MRPS24
URGCP
NOTCH1
APPBP2
TSC2
SLC9A3R2
NTHL1
MUC20
KLK7
KLK6
FOXJ2
FAM240C
VPS26C
LENG9
CDC42EP5
BTNL9
RTEL1
EFCAB2
NCR2
MCTP2
RNASEH1
MSI2
CLTC
ESRRG
LHFPL2
FGFR4
RAMP3
CACNA1S
ASCL5
SIPA1L2
TMEM18
POU2F1
GREB1
ITPR1
FOXA2
DUX4
SPACA6
TMEM121
SP1
SLCO3A1
LAD1
DDI2
PDP2
LHX3
INTS9
HMBOX1
TP53RK
SLC13A3
NAP1L5
ECH1
CST3
SLC6A19
AMMECR1
RCAN3
TMEM52
CTCFL
NKX2-1
MTRNR2L2
MSH3
DHFR
NTMT1
ZFP41
MYADM
MFRP
C1QTNF5
SCYL1
KCNC3
STS
PUDP
SATB2
CDH22
BTNL10
ZNF148
KCNQ2
PALLD
LRRC6
CHRNA4
POR
PCBP2
MYL12A
MYL12B
PHF23
GABARAP
DVL2
VNN2
TMEM40
PIEZO1
ART1
PSAPL1
PRDM11
RPH3A
LCN8
LCN6
LCN10
ZNF862
OCLN
ABI1
CREM
PITPNM3
NPEPPS
TMEM63C
DHX34
C5AR2
ACTRT2
SLC7A2
EOLA1
SRSF9
EHD2
DYNLL1
NIBAN2
VEPH1
TSHZ3
FBXL19
PI4KB
ZNF358
TEX45
MMP15
MED6
LHX6
FEM1A
ITIH5
RASSF5
CA4
NOC4L
DDX51
PARD3
MDM4
ACOXL
DYNC2I1
NFATC4
TXNIP
NOL10
KNOP1
IQCK
GPR78
PIH1D1
ALDH16A1
RTL6
RCL1
HTR1F
PLCXD1
LMTK3
DYNLL2
PLXDC2
NPR1
ILF2
AHCYL2
MAMDC2
SERPINA3
HS3ST2
GOLGA6L7
ZNF205
MGA
IL26
SULT2B1
RRM1
LRGUK
PLCB1
SEZ6
ADNP
KLHL23
TAF6L
POLR2G
HERC4
RAB40A
ATP1A3
CREBRF
LILRA4
FOXK1
CNPY1
TRIM14
LRRN2
LMNB1
CMIP
ARID2
BRD2
BBX
VARS2
GTF2H4
MYMK
NR5A2
PAK1
PRSS27
EXOSC4
CCDC112
GOLGA6L10
FBXO11
RNF166
CTU2
POMC
SERPINB9
MTRNR2L4
SMG1
SIGLEC15
NPAS3
BCAT2
ADAMTS9
VILL
GNAS
ZFR
PPM1D
TSC22D1
SKA2
PRR11
GAS7
DRG1
DBP
CA11
LHX9
BRIP1
PDXK
SETD1A
SH3YL1
PPP1R3E
CERS4
BCL2L2-PABPN1
BCL2L2
HDHD3
PRAG1
GAB2
LAMC1
CANT1
ICE1
LMOD2
OVCA2
RTN4RL1
DPH1
NPIPA1
HMGB4
MRGPRE
ERICH6
ARC
MYL3
BCAP31
ABCD1
ZNF131
MAP2K2
AGPAT2
SBK3
SBK2
ATXN1
TMEM187
HCFC1
DPP3
RALY
KCNK15
CROCC
CPLX2
PTPRH
TMEM119
LMBRD1
PPP1R21
LY86
KMT2E
KLK5
TMEM170A
LRATD2
KCNN4
PDCD5
NDUFV1
TMCO3
DCUN1D2
PRPF40B
OR6J1
IL11
FAM71E2
COX6B2
LGR6
SART1
TRA2A
ONECUT3
LY6H
ORAI2
APCDD1
HSD17B14
PABPC1
MSRB3
HPCAL4
HMGN1
CYP24A1
RARG
PRKCZ
PHF2
AAAS
FOXF2
STK3
OSR2
HOXC11
AMZ2
UBE2B
CDKL3
GRHL3
CPVL
CHN2
RBFOX1
CACNA1B
GNG8
CCDC149
FRG2
PPP2R5C
EDN1
N4BP3
AP5S1
TMIGD2
KRT23
GZMM
FSD1
MEF2C
HTR6
BARHL1
TMEM190
STAT6
MADD
CRY1
CALML5
ATXN7L1
LIN54
SCYL2
DEPDC4
GOLGA6L4
COMMD3-BMI1
COMMD3
BMI1
VAV2
KLHL26
KCNIP2
FGD3
BCL11B
SLIT1
GRP
FOXQ1
RNASEH2C
KAT5
TATDN1
NDUFB9
C8orf37
TRIM65
NPIPA8
NPIPA7
MRPL38
TLCD3B
CALHM2
CALHM1
C16orf92
TAF7L
TMEM271
CDKN3
TMEM126A
TCL1B
SHFL
PPP1R13L
POLR1G
TRIM56
WDR26
TSHZ2
TMEM30A
SOCS2
NCOA3
GTF2IRD1
SMOC2
FAM104A
C17orf80
INSM1
XG
GPR37L1
SLC25A19
MSLN
IL17D
RIMS2
CYP3A5
RNF19A
KCNB1
CCK
UNC80
S100A16
S100A14
PTGIS
PPP1R16A
KIF6
FOXH1
ATP4A
SPRY3
ISOC2
SHOX2
RSRC1
ADCY5
SEC13
KRT82
ARHGEF1
ADGRF2
TSPAN32
LSM2
ID2
HSPA1L
HSPA1A
GOLGA6L3
C11orf21
GDF6
CGN
CAPN1
PTK6
NPIPB15
ERF
ZNF574
SLC6A1
LTBP4
GRIK5
GABBR1
SDHA
CCDC127
UBTD2
SRSF6
RIPOR3
NFAM1
MTOR
GJA1
FCGR2A
TASP1
IRX6
IL25
EFS
E2F3
SEZ6L2
SCAF1
RRAS
ROCK2
RBM27
ASPHD1
EED
PHPT1
DDX59
CAMK2D
AJM1
TNKS1BP1
RAB11FIP2
LSP1
CTNND1
BTBD18
ADAMTSL4
BRPF1
ZEB1
PHF7
BAP1
SPINK1
KLF10
COL6A1
PRAC2
PRAC1
KSR2
HOXB13
GATAD2B
ANKRD6
ODF1
CXADR
ORC4
NPC2
MBD5
ISCA2
DNMBP
NACA
MAGED4B
MAGED4
KRT80
GSC
TRAPPC2L
SGCA
GALNS
FKBP5
EDN3
DGKH
ARMC12
TM4SF1
INF2
CPNE6
CD79B
NTNG1
GPR45
TRIM8
DNAJC27
TFAP2A
ZNF384
PDZD3
KCNH3
CCDC153
RPUSD1
CHTF18
PRR25
GNG13
DOK5
SP2
STX16
COL20A1
PDE1B
TTLL10
NBPF1
SERPINI1
PDCD10
CYTH1
AGR3
WNK1
RFX2
PERM1
IREB2
PRPF40A
ARL6IP6
AGL
DCAF5
RNASE4
ANG
SPACA4
MARCHF6
LRRC56
HRAS
TRH
RUNX1T1
ARRDC4
SDC2
EGFL7
FAM214A
TNPO3
MIR1-1HG
SNX16
ANP32B
PRSS8
PAN3
TAS2R16
NUCKS1
MYOZ3
GABPB2
TECPR1
LHX4
MUC3A
LIN7A
BCL9
TNFRSF25
PLEKHG5
CTDSP1
ZNF805
AURKC
ATF7-NPFF
ATF7
GPR162
CXXC4
COLEC11
BCL2L11
SLC39A5
RNF41
NABP2
IKZF2
SS18L1
PSMA7
WASF2
SIPA1L1
PRSS22
PRR36
LRRC8E
BIRC2
LRRC4B
ITPRID2
FIGNL2
RGS13
HAS1
TBX4
RPA2
PRRC2B
NUDT16L1
PPFIBP1
BPTF
PRAME
LDB2
GRK6
DRAP1
C11orf68
ARNTL2
ZNF462
VWA1
TMEM88B
RAP2C
DUSP4
ANKRD65
CFAP410
C1orf21
UPK3BL2
FAM117A
POLR2H
KRT35
FADS2
FADS1
CLCN2
RIN2
JDP2
UCKL1
SH3KBP1
OR2AT4
NGFR
IQCE
BRAT1
EBNA1BP2
CSNK1D
CFAP57
TMEM270
SHISA7
METTL27
LIMD2
RNF139
CIART
C1orf54
ALMS1
TMEM120A
INPP5F
PTGIR
ZBTB6
RC3H2
SQSTM1