ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
TRIM3
POLR3B
MTRNR2L8
MTRNR2L2
PLCB4
RTBDN
ARL14EP
REXO4
MYADM
C9orf152
CCDC59
MRPL44
MOB4
S100A16
PSMD6
AFF4
PCCA
SPRYD3
KRT18
EXOC2
GNPNAT1
STX16
TACO1
NOL11
TMEM87B
TTC39A
UCHL5
RO60
ZNF609
BAZ2A
PAQR4
SCAMP1
SMG8
FAM221A
N4BP3
PLEKHG2
KMT2C
INKA2
DDX20
GNAQ
IQANK1
FAM83H
ALG8
ZNF217
FAM20B
USPL1
HMGB1
SKA2
PRR11
SNAP29
PI4KA
TOP3A
SMCR8
DNAJC10
LDAH
MED23
MADD
GGPS1
ARID4B
REPS1
ZG16B
EIF1AD
BANF1
HIPK1
ZMYND8
DYNC1LI1
NOTCH2
FAM207A
TPD52
EMB
NOTCH2NLA
REXO5
ERI2
BLOC1S5
EED
SEC16A
C9orf163
VPS13B
PSMB7
CYRIB
BCAS2
ZNF860
OSBPL10
GRK6
NDUFS3
KBTBD4
SNRPB2
KANSL3
MLPH
ZNF408
ARHGAP1
IPPK
USP32
FAM227B
DTWD1
MARCHF7
NQO1
ATP5MC2
ZC3HC1
DSTYK
RPS7
DPY19L4
RBBP5
SLC25A36
SLC34A3
LEMD2
ZNF518A
NOTCH2NLC
TBC1D30
ECT2
TRIM37
TMEM199
POLDIP2
RBSN
SMIM14
PPM1H
LSG1
CYREN
INTS12
GSTCD
CEP63
ANAPC13
CHD8
NOTCH2NLB
WDR11
MEF2A
PHF14
MAF1
DCAF10
USP38
CKMT1B
RUSC1
PLA2G15
TAFA3
GSE1
MRPL1
APPBP2
SCYL3
TRIM33
NOXA1
LUC7L2
TOR1AIP1
TMEM183A
PMVK
SPOP
NECTIN1
TFF3
AP1M1
PMPCB
DEDD
CXXC5
USP9X
NEK5
AP3B1
UNK
H2AC21
OTUD7B
UST
RPL37
AP3S2
TEX14
RAD51C
ARL8B
DNAJC25-GNG10
DNAJC25
EEF2K
RTEL1
PCYT1A
BCAS3
TLNRD1
SLC39A6
MICA
ZBED8
IFRD1
GABPB1
ADPRHL1
SLC33A1
ATAD2
CPOX
TOP3B
SYNGR2
UTP25
PPIP5K2
GIN1
MMADHC
GNPDA2
SCNM1
LYSMD1
INTS2
ZNF410
ALG10
BRINP3
SETD9
PDE8A
PGK1
CNBP
BRIP1
ALG10B
SPHK2
RPL18
TSEN54
CASKIN2
TRIB1
LRP6
CIAO3
DDX59
ZFP62
TBPL1
ZNF197
KRR1
NRAS
GSPT1
SWSAP1
ATR
NUP54
LNPEP
PPM1D
SRSF7
KIF26A
CLTC
RASEF
NPM1
TRIP4
MRPS33
PPP2R5E
PDS5A
LINS1
ASB7
PSMC5
FTSJ3
SNRPB
NCOA3
ZNF446
GOLGB1
VMP1
PTRH2
CRNKL1
CFAP61
TANC2
LSM5
AVL9
AHCYL1
KMT2D
TPD52L2
BZW1
HNRNPA2B1
SGPP1
SLC24A1
INTS14
ATXN2
SF3A3
B3GAT2
ZFYVE9
ERCC6L2
ZC3H10
OSER1
PIGC
SLC35A1
RPL12
LRSAM1
HMG20B
RAB1B
TUBD1
RPS6KB1
METTL2A
GABPB2
RPS29
ZMPSTE24
TPK1
WWP1
ARFGEF2
RNFT1
DCLRE1B
AP4B1
RHOH
NPAS4
KMT5A
RABGEF1
FAM110C
SIRT4
RPS6KB2
C6orf89
NSUN5
SNAP23
ARG2
CPLX2
HTR5A
MTFR1L
TRIB3
IQSEC3
WDR74
SLC45A4
EIF2S1
ATP6V1D
MED26
ZDHHC1
MKRN1
CCPG1
C15orf65
TRMT12
TBX2
PPP4R3A
ECH1
DHTKD1
MXRA8
METTL3
MTMR12
TECPR1
PARD6B
HSH2D
RPS26
H4C8
FOSL1
PFDN4
CAP1
TXNDC11
PPP1R11
SLC25A40
DBF4
CCDC174
TMEM251
MOAP1
DMTF1
UBE3C
ZNF655
SLC39A1
CREB3L4
SPTBN4
BLVRB
IDH3A
FLOT1
FKBP4
FLYWCH2
DEF6
SNRPA
C19orf54
TEP1
KCTD11
SLIRP
ALKBH1
PRORP
PPP2R3C
UBA1
CKS2
ARID4A
ZKSCAN2
LIN54
RAPGEF6
NAB2
TFF1
ARPP19
GREB1
RPSAP58
BAIAP2
CYB5R4
NCBP2AS2
NCBP2
RPL32
DHX8
DPM2
CCNL1
ANAPC15
BARHL1
VPS26C
COMT
DHRS3
SUMO3
RBBP8NL
SAPCD2
ANO7
RHOBTB2
TSPAN13
HES1
DDX42
CCDC47
HEATR6
AKAP1
PTPN1
MRPS11
MRPL46
PNKD
NUCKS1
SMS
LHPP
PABPC1L2B
PRR7
CD59
CHD4
LLGL2
ING4
SLC25A24
RPL35A
IQCG
ALDH3B2
UGT2B15
BCAS4
FANCF
TMEM30B
PDE4D
RBM19
CYP4V2
PLEKHF2
MTOR
PPIH
GFPT1
CAPN8
EHMT1
ZNF335
THAP6
POLR3F
DZANK1
CYBC1
GORAB
EXD2
HSF1
BOP1
WASHC5
NSMCE2
ISG20
FAM83A
AMBRA1
TBC1D15
SPIN1
GTF2H2C
NME1-NME2
NME1
MRPS23
GTF2H2C_2
SUDS3
USE1
RASAL1
STK4
ZHX1-C8orf76
ZHX1
GTF2H2
SLX4IP
TUBG1
SLC1A5
RGS9
RETREG3
CSTF1
AURKA
VPS37C
CSRP1
TUFT1
EXOSC4
OSBPL7
RAC3
ZBTB8OS
RBBP4
POLR2J3
KIF5C
GOLGA1
NPDC1
CCDC9
RUVBL1
SPRED2
TEX22
PROSER1
NHLRC3
ZNF576
IRGQ
EIF3D
RNF223
PPM1A
PPM1E
ESCO1
ZNF2
DDX23
LYRM1
SNRPD2
QPCTL
CCDC149
AP4E1
ANKS6
PNPLA7
VPS11
EPN3
THTPA
CTCF
BPNT2
UCKL1
TRIM59
MIER1
DHX40
HELB
YIF1A
SLC16A5
NFKBIZ
NEUROD4
NDUFB6
SUSD2
HLTF
USP31
TFIP11
MON1B
CLEC16A
IPO11
UEVLD
TEN1
ACOX1
RAB3D
ACY1
RAB7A
HARS2
HARS1
GRHL2
SLC51B
MISP3
TMTC3
CEP290
CCDC97
COX16
BCL2L13
SMIM6
ZNF44
UMAD1
JUND
EIF4B
WDR55
PRKAB2
CHD1L
TOB1
CIB3
VPS33A
DSTN
BFSP1
GATAD2B
SEPTIN9
RMDN2
PLEKHN1
EIF4A2
EFHC1
CALM1
CSNK1A1
YWHAZ
RMND1
ARMT1
KRT8
PKP2
BICD2
TMBIM6
KIF21A
TNFAIP1
MRPS30
IFT20
GRHL1
GJC3
C3orf14
ABCF3
SULT1A4
SULT1A3
GRPEL2
RGL2
NUDCD3
VMAC
NDUFA11
CLK3
LAD1
SSBP2
PDE12
KLHL12
TSC22D1
XKR7
RTF2
UBE2K
CDK5RAP2
TPD52L1
GSTA4
ACOT7
LFNG
RPS27
SNAPC5
CEP128
ZNF277
RNF130
PRKCZ
DOCK4
ZNF564
MFSD4B
USP4
MRPL33
EBAG9
BCAS1
MKRN2
NMRAL1
HMOX2
ANKRD17
NME6
EEF1AKNMT
ATP5MPL
SGO1
RALGDS
FAM222A
RAET1L
FBXW2
C12orf57
PPP6R1
PDAP1
BUD31
HERPUD1
TDRD7
SRP72
SLC25A32
DDX50
DCAF13
GTF3A
EEF2KMT
RBM45
CKMT1A
SCRIB
P4HB
RNF224
TSC2
TAB3
NTHL1
MACROH2A1
IPO4
UNC45A
CIAO2A
CHRM4
KRIT1
ANKIB1
FMN1
EYA3
SLC44A2
PRR15
ZDHHC12
SMNDC1
CAPZB
PCTP
LRCH4
FBXO24
CD63
TSNARE1
ANKRD13D
KCNB1
SEC13
TCAF1
SNAP25
HOMEZ
HM13
ST20-MTHFS
COMMD1
CCT4
HIBCH
H2BC4
H2AC6
GTSE1
ALG13
SGO2
RPS11
SYVN1
BCL2L2-PABPN1
BCL2L2
PARP2
MON2
LRRC6
CD82
TPH2
RCAN1
C8orf76
RNF24
PPP5D1
CALM3
RRBP1
MAZ
DDX46
TMEM222
TIPRL
FOXJ3
CCDC22
NTAN1
SEC22B
FAM83E
NTMT1
GAPVD1
UBR7
RAC1
GON7
ARNT
SRFBP1
GCN1
BCL3
TNPO2
SASS6
ALCAM
SYT7
SLC26A1
SEC24A
FAAP24
CEP89
MRPL10
LRRC46
SLC39A9
ERH
PSMA5
METTL9
ZNF165
EFCAB10
TPRKB
DNPEP
PAH
SRI
SERP1
GPR107
EIF2A
PSMF1
NDUFA4
PPIL2
OCEL1
HLF
VPS29
RAD9B
MYCL
SLC25A42
MARCHF11
TBCC
NR4A1
ESYT3
BICRAL
YEATS4
ZBTB42
SLC39A3
IST1
CHFR
ABL1
TMED2
PKM
IMPA1
EIF2D
ZBTB38
TVP23B
CCAR2
STAT6
POU5F1
TBL3
GDAP1
UPK3BL2
STYXL1
SPECC1
CASZ1
AHRR
SLC35E2A
MCM7
MACROD1
AP4M1
CSRNP2
VEPH1
SLBP
TTC6
MICOS10-NBL1
MICOS10
GNAI3
FOXA1
CLCC1
RPL22L1
HNRNPC
BTG1
TOM1L1
SMIM5
ABCB8
SETD5
CD2BP2
UBL7
THUMPD3
USP7
CTTN
TMEM9
SLC35B1
PACS2
BRF1
RPS20
NFE2L2
ADPGK
TXNDC15
FBXL19
TTC14
PCLO
POLG2
KAT7
LRP10
TCERG1
STX3
SPATA24
FRAT1
UPK3BL1
TINF2
B4GALT7
SMIM20
CACFD1
ZNF76
U2AF1L5
U2AF1
ID1
GLRA1
DIAPH1
CSDE1
ADCY4
ZNF512
PTP4A3
PPP1R12B
MARS1
ARHGAP9
WDR54
UBE2E2
SENP1
SCAMP5
PFKM
C2orf81
ABCA5
SCAND1
DDX41
IVNS1ABP
HTRA2
SLC25A53
TJP2
LACC1
FBXW5
CRACR2B
CCDC122
C8G
UBE2L3
OSBPL2
PRKAB1
SMARCA4
SGPL1
PABPC1
CPNE4
CDC42SE1
TIPARP
PDXK
TMED7-TICAM2
TMED7
EPS8L1
USP36
SRRM3
G3BP2
ROGDI
AP2S1
TCTN3
TATDN1
NDUFB9
GTF3C3
THEM4
SSBP1
EFR3A
SUMO2
SEMA3B
U2SURP
NUDT5
IRF9
DIABLO
CDC123
SLC39A13
TOR1A
LOC100289561
DCP1A
STAM2
CTBP2
ARRDC2
YBEY
TMC7
RPP14
PA2G4
NFX1
MCM3AP
HTD2
DDHD2
TBK1
RRP15
POR
BMS1
XPOT
SERBP1
MDM4
HPCA
DUSP10
CAPS2
CAP2
PRMT6
BTBD1
PRKCI
PLCG1
NR2F2
MRPL21
IGHMBP2
ZHX3
TLE3
PPFIA4
TRIM56
SF3B2
STMN3
NUTM2E
CRADD
PRKCSH
LSM14A
KATNIP
HIP1
GTF3C1
GARS1
COA6
CCDC151
FANCL
DNAJC22
CD55
AVPI1
SETX
GCLC
TRMT2A
TMBIM4
SLC29A2
RANBP1
ZNF484
TBL1X
SMIM26
RHOT2
ZFP37
TBC1D16
TARS3
SEC24C
COX6B1
CCDC40
STOML1
PIAS4
JRK
MRPL24
MLXIP
C16orf71
ANKS3
ADIRF
EIF4ENIF1
UFD1
RAD51
POC1A
CDC45
VIRMA
SLC41A1
CLIP1
ARL13B
SREK1
NSG2
MAPK1IP1L
GLRX3
EXOSC6
ANKRD46
ALG6
ZC3H6
PPP6C
NT5DC3
NADK2
MAP2K3
EMSY
COQ7
SPATA17
PCBP2
NELFCD
GPATCH2
FOXN2
DRAP1
CNTRL
C5
C11orf68
RRP12
ALPK1
ZNF3
TPBG
MRPS31
FRA10AC1
UBXN4
SF3B6
RNF10
PRSS22
KMT5C
GBA
FAM228B
ZNF787
VOPP1
UBE2Z
SLC16A6
MAPK10
ARSG
RUBCN
HSPE1-MOB4
HSPE1
HSPD1
DIP2A
FUT1
CPSF1
BUB3
ZKSCAN5
TMEM14A
PRKAG2
EIF2AK1
EDEM1
STIL
SLC9A8
NAPEPLD