ChIP-Atlas: Target genes

Potential target genes for XRCC4

Query protein: XRCC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4192136 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
XRCC4's Target genes

◢ XRCC4: Average

◢ SRX150504: K-562

◢ SRX4192131: MCF 10A

◢ SRX4192132: MCF 10A

◣ SRX4192136: MCF 10A

◢ SRX4192137: MCF 10A

◢ XRCC4: STRING

RBM42
TBL3
RPS2
RNF151
NOXO1
RGPD2
RGPD1
TRMT61B
KIF5C
DUX4
PMF1-BGLAP
PMF1
TMEM208
LRRC29
TRIAP1
COX6A1
CWC25
TRMT44
ACOX3
MTRNR2L8
MTRNR2L1
MTRNR2L2
MSH3
DHFR
RPS6KB2
PTPRCAP
PRKRIP1
GPAM
OXNAD1
DPH3
SSNA1
ANAPC2
TFPT
PRPF31
RLF
NOC4L
DDX51
GTF2H3
EIF2B1
MRPL55
PFAS
TSN
MRPL4
FAM149B1
ECD
TMA7
CCDC51
ATRIP
ADPGK
TBRG4
MAMDC2
NUP153
POLR3F
DZANK1
SLC35E1
IPO11
DIMT1
CCDC86
NFX1
RMDN3
GCHFR
CWF19L1
C1D
SRRD
HPS4
SSU72
MRM3
GLOD4
PWP1
CMTR1
NUP214
RAD18
PINX1
C7orf50
SPTLC1
MRPL2
KLC4
CUL7
POMZP3
MAPKAPK5
FBXW7
ADAR
CLPTM1L
GNAL
CHMP1B
RPL6
PTPN11
MAGOHB
RRM1
AASDH
SUPV3L1
DUS2
DPEP2NB
DDX28
ADAMTS9
LANCL2
NOP9
DHRS1
MAGOH
ZNF517
ZNF34
RPL8
KPTN
TCTE3
ERMARD
RNF139
THUMPD1
ORMDL3
GSDMB
TRUB1
WDR4
DNAJB12
WDR74
STX5
FDXR
PTPRN2
PPIL4
MIA3
PELP1
ARRB2
RNF166
CTU2
SPHK2
RPL18
FAM83E
NPHP1
MTLN
NCBP2AS2
NCBP2
SERINC4
SERF2
HYPK
SNRPC
ACAD9
PPP2R3B
SF3B5
RNPS1
ZNF721
PIGG
ZC3H3
UNKL
C16orf91
NAF1
NDC80
METTL4
HAUS5
CENPW
ZFAND2A
PURB
CCNA2
OAZ3
MRPL9
SLC35F5
CYP46A1
POLR1F
PLAA
IFT74
SLC25A1
CTDP1
RRP1
FANCD2
MED9
ATXN1L
UBR4
WDR70
NUP155
FRG2C
ZFPL1
TMEM262
CDCA5
RPS8
SLC25A16
SRPRA
BDP1
QTRT2
CCDC191
C1orf198
MTRNR2L9
PEX12
AP2B1
XAB2
STXBP2
PCP2
PPP1R3E
BCL2L2-PABPN1
BCL2L2
RANBP6
KIAA2026
THAP4
ATG4B
SRSF11
LRRC40
COPS8
SETD3
CCNK
DNAJC30
BUD23
TMEM237
FAM187A
EFTUD2
CCDC103
VPS37A
CNOT7
MTHFSD
PUM3
UBQLN1
CCDC59
WDR53
FBXO45
TGFBRAP1
C2orf49
RABL3
GTF2E1
RRP1B
HSF2BP
SAP30BP
RECQL5
FAM122A
THOC1
GHITM
EXOSC9
SECISBP2
CKS2
PEX10
CCDC124
IDH3B
GTPBP10
PHF7
BAP1
ZNF26
RPLP2
PNPLA2
PIDD1
MAP3K7
OR6B2
NDUFA10
TUBGCP6
HDAC10
SPACA9
AK8
CHPF2
ABCF2
CFAP410
CDK11A
STX18
RIN1
BRMS1
B4GAT1
AP5S1
CDK11B
RECQL4
LRRC24
LRRC14
MFSD3
RPL23
GAN
COMMD1
CCT4
N4BP1
EDF1
KIAA1109
AOPEP
RPL9
LIAS
FRG2
MFN2
DHDDS
MED20
BYSL
RNH1
TRMT5
SLC38A6
EFCAB2
PGBD4
EMC7
C8orf33
NOLC1
RPUSD2
CCDC32
SLFN14
CENPBD1
WDR61
TMEM183A
BRCA1
BOD1
NRAS
CACTIN
TAF11
ANKS1A
PSMB2
PAK1IP1
C6orf52
IL32
WFDC3
DNTTIP1
PSME3
BECN1
MYBL2
SDE2
CDADC1
UBAP2
RANBP2
SMPD4
MZT2B
ZNF614
ANAPC10
ABCE1
NOL10
PROSER1
NHLRC3
MED6
AP1G1
NUP133
MFSD14C
ZNHIT2
FAU
RPIA
TBCK
AIMP1
NUFIP1
GPALPP1
PIGU
PEF1
NDUFV1
PTPRU
MECR
PRMT3
NAT10
BET1
SENP5
MORF4L1
NELFA
MIB2
LDAH
MED27
HBS1L
TTLL5
ERG28
NUP42
PISD
ZNF805
AURKC
TTC1
ART1
TMEM147
DDX49
COPE
WDR75
VPS4B
WASHC5
NSMCE2
ARHGEF7
TBC1D22A
SKIV2L
NELFE
TPRN
TMEM203
NDOR1
SPRYD4
S100A6
S100A5
WDHD1
SOCS4
SLC9B1
VCPKMT
ATP9B
UBE2A
CXorf56
MMUT
CENPQ
USP14
KIF15
KIAA1143
CNOT1
TIMM13
SPAG1
POLR2K
FBXO43
RNF141
IFT172
GCKR
FNDC4
COQ7
ZC3H13
ATG16L1
ANKRD17
CBWD5
CBWD3
ZNRD2
FAM89B
EHBP1L1
TMEM71
PHF20L1
ZWILCH
SNAPC5
RPL4
BLOC1S5
MDN1
CASP8AP2
USP42
TUFM
SH2B1
SLC35B1
UBE4A
TSSK4
MDP1
CHMP4A
ZNF304
GPKOW
CHMP4B
TOMM6
PRICKLE4
FRS3
CCDC113
NDUFB6
APTX
STK19
LOC110384692
DXO
C4B
C4B_2
C4A
RNASEH1
TBCCD1
DNAJB11
MUL1
XPNPEP3
ST13
DNAJB7
HDAC6
USP8
ZC3H18
SERP1
EIF2A
ATAD3A
GNG14
FBXW9
VAMP3
PPWD1
CENPK
TPR
ODR4
GUF1
MZT2A
CBWD2
UTP15
ANKRA2
KDM5A
CCDC77
OGDH
EMC4
ZGRF1
LARP7
MFSD14B
RTF2
XRN1
PKN2
TTI1
RPRD1B
DCAF1
USP20
C9orf78
U2AF1L5
U2AF1
FAM156B
FAM156A
ATG5
ZNF79
NBR1
ZBTB11
RPL24
EIF2S2
DHX40
SRA1
SLC35A4
APBB3
ING4
ZNF576
IRGQ
ATAD3B
SCFD2
RFC1
SLC25A53
FAM199X
CAAP1
ZNF133
ABT1
MRPS17
ZNF263
CBWD6
LRRC57
HAUS2
GTF3C2
KLHDC4
PPIG
DDX19A
COX18
PPP4R3A
NGDN
RFT1
ZNF268
NDUFB10
C8orf82
IQCC
DCDC2B
CCDC28B
ZNF830
CCT6B
NXT1
GZF1
GTF3C4
DDX31
ATG7
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
POLA1
ZCRB1
PPHLN1
GNAS
ICE1
NIPA2
DARS2
CENPL
GUK1
GJC2
PHF5A
ACO2
LONP1
CATSPERD
ZNF514
ZNF2
DUS4L-BCAP29
DUS4L
COG5
KLHL7
FAF1
CDKN2C
ALS2
SMU1
OSBPL8
GSC2
DNTTIP2
SELENOK
ACTR8
UCHL5
RO60
FDXACB1
C11orf1
ALG9
FAHD2A
TDG
C12orf73
GPR89A
GAR1
METTL1
EEF1AKMT3
CYP27B1
RPN1
SCAF11
FBXL18
ERLIN2
TBP
PSMB1
ELK1
TMEM9B
TMEM230
PCNA
ZNF653
ERCC5
FBXW2
ZFYVE28
TPT1
CFAP99
KLHL12
OTUD6B
NHP2
CLN5
PBX2
GPSM3
EEF1AKNMT
GABARAP
ELP5
CTDNEP1
CLDN7
ZDHHC3
EXOSC7
LAMTOR5
TRMT10C
PRC1
METTL14
FCF1
AREL1
RTRAF
RBM18
MRRF
NRDC
NXF1
ZNF181
SEC13
ZNF460
PSKH1
NRN1L
RBM22
TMEM70
ELOC
PITPNM1
MTRNR2L10
TUBA4B
TUBA4A
STK16
GLB1L
CBWD1
TAF9
RAD17
AK6
NCAPH2
LMF2
CACYBP
TPP2
RBM15B
MANF
CCDC174
TFIP11
SAMD10
PRPF6
SENP2
TRAK2
STRADB
TMEM128
SPTY2D1
KMT2A
SIKE1
ZNF180
USP16
RWDD2B
PPP1R11
POLR1H
MAP3K13
RCE1
MCF2L2
CLPB
RNMT
FAM210A
NPM3
FGF8
TRAP1
HINT1
SIVA1
COX7A2L
PRR3
GNL1
CCNT1
RPL31
ZCCHC9
THOP1
SGTA
ZNF367
CBLL1
ZNF778
ENDOV
PDCD7
XRCC2
RPS28
NDUFA7
SPSB3
MRPS34
EME2
CDCA8
C1orf109
MZF1
SF3A1
CCDC157
PSTK
GPR89B
UMPS
ZNF23
KLF1
GCDH
ELP1
DNASE2
CCAR2
C8orf58
ABITRAM
HPS5
GTF2H1
SNF8
SESN1
EDC3
CEP57L1
CDK5RAP2
MBIP
TRMT2A
RANBP1
NAA40
SLC25A3
CAMLG
ZZEF1
CYB5D2
SSBP1
PHB2
CCDC150
ZNF584
RNF225
SART3
ISCU
RAB8B
TIMM21
GOLGA1
FBXO15
RBM8A
PEX11B
MCM6
PACRGL
GID4
ATPAF2
RALBP1
ICE2
CAPN10
TXLNG
SLC35A5
LCLAT1
ATG3
UBA52
C11orf65
TIMM44
MALSU1
MKS1
ZNF337
MAP2K1
HINT3
MRPS14
UQCRFS1
WDR18
TRIM52
MTBP
MRPL13
EXO1
PSMG2
CEP76
RPS3
CCDC130
ZNF839
GMPPB
AMIGO3
NUP54
ZNF266
TSFM
TNFSF13
SENP3
PTPN6
C12orf57
ATN1
TRMT10A
MTTP
LYST
UBE2I
UBE2T
PPP1R12B
CABP4
ZNF436
EPRS1
MMGT1
THEM4
LAPTM4A
C1orf74
ARL1
PARP2
LEMD3
NARS1
C6orf62
WDR36
SKP2
LMBRD2
BCL10
CTPS2
MRPL39
CYP4F11
TEKT2
ADPRS
FAM174A
DPH2
B4GALT2
ATP6V0B
CIAO3
PDHA1
FBXL19
CLINT1
ATXN7L3
PNPLA4
ZNF165
TMEM231
OR1F12
FAM135A
YIPF2
TIMM29
WDR43
HNRNPA3
PFDN1
GALK2
TPD52L2
POT1
ABHD16B
KLC1
EEA1
SRFBP1
RBBP5
TUT7
EMILIN2
KBTBD6
FUNDC2
F8
HEMK1
C3orf18
VIM
XPO4
EIF2D
LUC7L2
FMC1-LUC7L2
FMC1
FAM76B
CEP57
NGB
DDX19B
AARS1
GEMIN8
SPATA7
ADAT1
TOR1AIP2
TOR1AIP1
TMEM242
HPS6
ARMH3
LMBR1
SIRT2
SEC61G
PKLR
NFKBIB
LENG9
FDPS
CDC42EP5
MTRNR2L6
RRP15
LSM2
HSPA1L
HSPA1A
ATL2
PLA2G4E
RRNAD1
ISG20L2
PRMT9
ZNF706
NAPA
FEM1A
PET117
KAT14
ROMO1
NFS1
DHX33
BOD1L1
RNF138
DEPDC1B
IRF7
SARAF
XRCC1
TMEM181
PINLYP
NSUN6
ARL5B
TIPIN
MRPS11
MRPL46
TMEM199
SEBOX
POLDIP2
NUF2
GSTO2
NDUFS7
C5orf15
LOC100287896
LIPT2
TM7SF2
GABRR3
EIF3L
ANKRD54
RNASEH2C
KAT5
MED23
ENPP3
ITGB3BP
EFCAB7
KIF5A
DCTN2
TMEM106B
USP36
SEC16A
C9orf163
ZSCAN22
TMEM175
GAK
IPPK
LCMT1
YTHDF2
CMSS1
TMEM127
CIAO1
TMEM222
TIGD6
NME6
HMGXB3
C6orf47
BAG6
APOM
RNF7
WRN
PURG
STK11IP
SLC19A1
HSPA6
BICD2
PITPNB
SLC35B4
TRIM3
TIMM10B
CCNH
ARFIP2
MARCHF5
CPEB3
C9orf16
BCAS2
RTTN
MTX2
CDH11
TOMM22
DSTYK
SZRD1
UBR7
GTF3C5
GON7
COMMD2
ARF4
FMNL2
UBR2
ZDHHC6
VTI1A
ZNF444
NSMCE3
ZNF550
ISY1-RAB43
ISY1
PRRC2A
AIF1
ARF6
STX16
POLR2F
C22orf23
SLC38A5
FTSJ1
TRAPPC2
OFD1
NDUFS3
KBTBD4
FAM180B
DDX18
PRDM4
TCTN3
COL23A1
MRPL21
IGHMBP2
C19orf48
ATXN2L
METTL23
JMJD6
THAP9
SEC31A
PHRF1
PGP
KYNU
E4F1
CTCF
SETD1A
ORAI3
FUT11
CHCHD1
CSTF1
AURKA
COQ9
CIAPIN1
TIGD5
NDUFAF3
EEF1D
DALRD3
NR4A3
DBNDD2
CYP51A1
RGS19
OPRL1
NDUFS5
LKAAEAR1