ChIP-Atlas: Target genes

Potential target genes for ZNF3

Query protein: ZNF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457356 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
ZNF3's Target genes

◢ ZNF3: Average

◢ SRX3322078: Hep G2

◢ SRX3322079: Hep G2

◢ SRX11165972: K-562

◢ SRX11165973: K-562

◣ SRX5457356: K-562

◢ SRX359978: LoVo

◢ ZNF3: STRING

NPAS4
CCDC9
PDE8A
ANKRD13C
LIN28A
XKR7
HTR5A
NKX1-1
DRAM1
MTRNR2L2
MSH3
DHFR
SUPT3H
KIF5C
ATG4D
PSAP
TMEM63B
MRPL14
MTRNR2L8
JAG2
ELANE
CFD
IQSEC3
L1CAM
TNFAIP8L1
INSM2
CELSR3
MTFR2
TMEM119
PIP5KL1
DPM2
MAFK
RTBDN
MAST1
CRK
PLIN3
NEDD1
GDF5
CEP250
UBQLN4
LAMTOR2
TPT1
PPP5D1
CALM3
CPLX2
RPS28
NDUFA7
MFAP3
FAM114A2
EPHA10
ZC3H18
DUX4
RAPH1
CARHSP1
FZD1
UBE2H
FUCA2
MTRNR2L1
ZNF182
SPACA5B
SPACA5
HPCA
SPOCD1
FBXW8
RPS15
APC2
FAM24A
DHX16
SYCE2
UGGT1
CCDC130
LRRC25
DRD4
ACAT1
ART1
YTHDF2
REX1BD
THUMPD1
TMEM242
COL23A1
CIC
ZNF23
GLRA1
PHRF1
ETFDH
C4orf46
TFB1M
PRKACG
IL36RN
IL36B
MAPK8IP2
PEAK1
HMG20A
EIF1
PPP1R18
NRM
CPNE9
KCNN1
SLC39A13
EML2
PPP4R1
AP1M2
SNX19
SH3PXD2A
CPT1A
NUP214
SMPD2
PPIL6
MICAL1
SNRNP25
POLR3K
SIGLEC10
GTPBP6
TMEM43
CHCHD4
TTC12
KLK4
MYH9
SCG3
CRYAA2
CRYAA
RBM38
IQCE
BRAT1
CCDC22
CACNA1F
OSBPL9
TOP3B
RIPPLY2
CYB5R4
SNRPA
C19orf54
FTH1
KIAA1958
C9orf147
DLGAP3
VARS2
GTF2H4
ELOVL6
EBI3
TMEM72
PRR29
ICAM2
RBP7
MANEAL
NDUFB7
H4C2
H3C2
H2AC4
RTN4R
RAP1GAP
LILRB4
EAPP
LCK
FAM167B
ICMT
HES3
KLHDC8B
CCDC71
BARHL1
UBB
SNAP25
MAP3K3
MED23
ENPP3
PSMD9
HPD
ZSCAN25
BAHCC1
POMGNT1
TANGO2
ARVCF
PTGIR
GNG8
DNAJC6
VGF
NUF2
RAB3A
CNOT3
USE1
OCEL1
BROX
AIDA
PDE4A
ZNF391
MRPL2
KLC4
CUL7
PTPRN2
MOGAT2
EPHA2
RPS7
RHOG
CEP295
TCIRG1
NDUFS8
LYPLA2
GALE
FGD3
PLEKHN1
NOC2L
KLHL17
PCBP1
H4C12
H4C11
H2BC14
H2AC14
MRPL40
HIRA
FAM102B
TGFB3
IFT43
DMTF1
NEMF
CCDC116
TPK1
SDF2L1
RTN3
ATL3
HBG2
HBG1
CCDC71L
ONECUT3
ANXA11
YES1
SSBP2
FCMR
RAB10
ERN2
N6AMT1
TMEM9B
TJP3
PIP5K1C
SLX1B
SLX1A
CORO1A
BOLA2B
BOLA2
SMCO4
SMARCC1
TEFM
TBC1D19
EIF2B3
CACNG3
CYP4V2
PRAME
TMEM14B
BLOC1S5
SNAI1
RHAG
PKD2L2
MAT2A
UAP1L1
SAPCD2
SPDYE16
C19orf71
SCRT1
DGAT1
AKAP14
ZBTB8OS
RBBP4
ANKHD1-EIF4EBP3
ANKHD1
EEF1AKNMT
CYP3A43
STX16
SDSL
MED15
CADM3
RAB37
GALR1
CD55
RGPD1
RGPD2
KRBA1
HDAC1
BIRC2
DDB2
H2BC15
H2AC15
RPL5
TRIT1
PGBD2
CMIP
ENTPD2
WDR36
ATP2A3
ZNF628
ISOC2
ZNF746
ZCCHC7
DCAF10
OPRL1
SRRM3
COX20
PRF1
CCT2
MYLIP
MICALL2
CCT8L2
H1-2
SF3A3
RABGEF1
TCAIM
ZSCAN9
HPS5
GTF2H1
RGS19
LKAAEAR1
KCNE1
CENPE
KIAA1191
ARL10
EPOP
AGAP3
ORC5
ANGPTL7
STRN4
FKRP
SCFD1
CBLL1
SUSD3
MTRNR2L9
GAGE2C
GAGE2B
GAGE2A
GAGE1
TPH2
H4C9
SDCCAG8
RITA1
H2BC12
H2AC12
DDX54
CTNNB1
CEP170
TK2
CKLF-CMTM1
CKLF
MUC3A
FAM133B
COA3
CNTD1
ZNF655
PRSS22
LGR6
MGAT1
PUM1
NR5A1
NET1
CENPC
SMARCC2
IRF2BP1
STK38
OGDHL
SELENOH
IL26
WARS2
ING3
DNAH14
LSM10
TRIM44
COLEC11
TTC26
H2BC17
H2AC17
NBPF1
RBBP5
HMGCS1
H3C12
TRA2B
THEG
CSDE1
BTNL9
SMIM17
INKA2
DDX20
SUMF1
SRSF7
ST7
PEX3
ADAT2
KDM4A
FUS
H2BC11
H2AC11
HERPUD2
FAM227B
DTWD1
CALB1
RNF214
PCSK7
ECE1
ID1
TULP1
NUP153
BBS5
MAPK1
TIPARP
SREK1
LHX9
CHD2
C1orf53
UNK
H3-3B
H2BC21
H2AC21
H2AC20
CSNK1G2
RMND5B
TRDMT1
AARS2
NPPB
NGB
ACBD6
SCAMP2
TXNDC2
EEF1E1
YIF1A
TMEM151A
NFE2L2
TUBB3
MC1R
H3C13
H2BC18
GSDMD
H6PD
PNRC1
PBLD
HNRNPH3
GOSR1
INTS12
GSTCD
TMEM39B
NUDT4B
HMGN1
ATP5MC2
SLC35E2B
POLRMT
FGF22
COL1A1
H4C3
H1-6
UBR4
SPG11
NCKAP1L
OSER1
METTL15
KIF18A
ZBED9
TTC4
TBL2
SRSF10
FH
ZNF595
PHF19
BIRC3
P2RX6
LZTR1
SSBP1
TATDN3
SEC22B
NSL1
CSF3R
HINT3
ADGRE2
FOLR1
FBN3
SLC35F6
BRIP1
NUFIP2
HIC2
EP400
E2F6
PGBD5
SLC7A4
RSPH14
RAB36
MRPL17
LMOD1
EVI5
KLHL20
YAE1
THAP9
SLC29A3
SLAMF6
SEC31A
RICTOR
MORC3
H3C6
H2BC8
H2AC8
EPN1
EED
DUSP10
RPS29
SLC44A2
WASL
OAZ1
JSRP1
ENTPD3
LMTK2
LUC7L2
FMC1-LUC7L2
FMC1
PIRT
LAMTOR5
PTPRS
SP3
IQCB1
EAF2
TMEM167B
SMIM30
RTL10
RBM18
PRR15
MRRF
MPZL1
GNB1L
ERI1
KCTD3
ITGA8
FAM149B1
ECD
ANGEL2
RBM28
SIKE1
MKLN1
GTSF1
ADARB1
STX18
MST1
PPIP5K2
NAF1
INTS6L
GIN1
DTX1
MRPS7
MIF4GD
GGA3
PRX
CCNL1
TSEN15
XRCC2
VPS26C
SERTAD1
PELI1
NSUN4
COX18
AP3S2
GPR37L1
NEK1
HSD3B7
CLCN3
PTEN
KLLN
SCAMP4
RAP1GDS1
GOPC
ENTPD8
ADAT3
HDAC2
LRIF1
POLR1F
ATP5MC3
AP3B2
PHTF1
NR1H3
ACP2
ZNF484
PSMG1
MLH1
EPM2AIP1
PROC
CHGB
MARCHF4
TMEM217
TBC1D22B
KMT2E
CLASP2
DNPH1
SLC25A51
RPS26
MIA3
LYSMD3
GPN3
FBXO22
FAM216A
CETN3
LPIN1
NFATC2IP
UBR2
THAP6
MRE11
LOC102723971
GAS8
G3BP2
DBNDD1
ANKRD49
ZSCAN22
RPEL1
RIPPLY3
COA7
WDR48
TMEM63A
SCN11A
RNF141
LEFTY1
HECTD4
CCDC138
TCAF2
NBN
METTL2B
JMJD1C
IL20
ARHGEF19
ANKRD46
ENOSF1
MLN
NUDT7
CDC73
SLC25A36
LRRCC1
FAM111A
SLC25A25
STX3
SDCBP
NRF1
LRRC37A3
KCTD7
AGBL3
ZNF184
H2BC5
H1-4
ALDH18A1
FIBP
EFEMP2
CTSW
TRAF6
THOC3
SF3B5
RAG1
FASTKD1
CYP2R1
RNF39
PPP1R11
PPIL2
POLR1H
NIBAN1
GPR78
ERRFI1
ERBIN
CEP85
EPS15
ITGB3BP
EFCAB7
CCNC
SLC35A3
TAF13
PVRIG
CDC42BPA
ACTL6B
TMEM267
CPNE4
ZNF425
ZNF398
POLR3E
RPL32
RESP18
PACC1
CHD1
CCND3
PALM
CNNM2
YARS1
UFL1
UBN2
TEX46
S100PBP
PRSS57
POLR1B
KDM1A
CBWD6
CBWD5
CBWD3
NOL7
ATXN1
THAP5
RFC1
PIP4P2
PAXBP1
GATA1
ERCC1
DNAJB9
CENPW
CDC42
BSND
BPHL
DNAJC11
THADA
THG1L
PNPLA6
MRPS18C
HELQ
GRPEL2
GOSR2
FBXO4
CA4
CHRM4
TRIP4
PCLAF
HSFX3
EOLA1
STMP1
MGA
HSPA5
DPY19L4
INPP5D
TTC33
SPATC1L
SDHAF3
RPL15
PDCD2
NKIRAS1
NDUFS3
KBTBD4
IFNAR1
FAM180B
FAM155A
CPED1
PTP4A2
UTP20
TSACC
SRSF1
SNX14
SLC5A3
RBM7
RBBP6
RAB18
PPT1
MRPS6
MRPS16
LHFPL4
ITPRID2
DNAJC9
COL6A2
CCT3
C11orf71
RAD9A
TTC9B
STAM2
PARPBP
PAFAH2
NUP37
FEM1C
DCAF8
CWC22
CLCF1
ALKBH3
USP30
SVOP
ZNF248
WTAP
UMAD1
SOD2
RWDD1
PRMT2
PDLIM5
PCBP3
HNRNPA2B1
HBP1
H2BU1
H2AW
FANCD2OS
ETAA1
CEP152
CBX3
BRK1
ARHGAP39
IQSEC1
TCEANC
DHX40
LTN1
SH2D1B
RAD23B
POT1
NAP1L4
MOB1B
INO80C
GPR89B
EPRS1
ANP32B
STRADA
KPTN
ZMPSTE24
SNAP29
SLC30A5
PI4KA
MIER1
GPR61
GNAI3
EXOSC9
DNAI4
TMEM88B
ANKRD65
RGS3
HACL1
BTD
ZKSCAN8
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
TADA1
RTP3
MMP8
LYPLAL1
LTF
ELF2
CCDC188
UNC5B
PAX6
MMGT1
IL17C
H2BC4
H2AC6
CNTRL
C5
MYH7B
GSS
ANK1
ELAVL3
TRIAP1
COX6A1
XYLB
VRK2
USP45
TSTD3
SLC25A13
MTX2
KATNA1
HEY2
FIP1L1
TSEN54
LLGL2
CASKIN2
MTF2
DMAP1
KLHL12
ZNF614
ZCWPW2
TGFBRAP1
PSMB10
NEDD4L
LCAT
KRT28
GTF2H3
EIF2B1
CTRL
CRB1
C2orf49
AZI2
ATP6V1C1
ABCA3
HDAC11
LSM5
AVL9
BAIAP2
SPDYE7P
POM121
DNAAF2
PDE4C
PAPSS1
MTR
MRPS35
ZBTB22
VPS37C
UBE2L3
TAPBP
SRSF2
SMIM40
PRKRA
PJVK
PHKA1
NSA2
MYL12A
MICOS10-NBL1
MICOS10
MFSD11
LIMA1
GFM2
EFR3A
DUS4L-BCAP29
DUS4L
DAXX
COG5
CBFA2T3
BAZ2B
ASB15
LHFPL5
CLPS
TSPYL2
TOMM20
TNPO1
TMEM60
RTN4
RINT1
PUS7
PRPF4
PHTF2
NSRP1
NPTXR
NFKB1
EHD1
CZIB
CES5A
CDC26
AEN
ADK
XPC
TTC30B
SLC2A1
RHCE
PDCD6IP
NDUFA4
MACO1
LSM3
KDM4D
H3C10
H2BC13
H2AC13
FAM120B
EEA1
DARS1
CWC15
B2M
GTF2H2
SAYSD1
GTF2H2C_2
NDUFS7
ZNF76
ZFC3H1
XKR9
THAP2
SGCA
SCLT1
PPP1R12A
POLK
OSBPL8
OPN1SW
MPHOSPH10
MCEE
LACTB2
ITPR1
CERT1
CCDC136
C4orf33
BCAT1
CRKL
DDIT4
YOD1
UBE2D3
RRM2
PFKFB2
OCIAD1
IMMP1L
GPHN
FBXW2
ELP4
DIO1
ALG8
ZFP36
INVS
ERP44
KIF16B
SNX29
ZNF627
XXYLT1
SARAF
RBM48
PLEKHG2
PEX1
PDP2
P4HA1
MRS2
LRRC8B
ESCO2
ACSL3
PRDX1
RAD50
DUS2
DPEP2NB
DDX28
RBM45
PDE11A
YTHDC1
UCP3
SEMA6B