ChIP-Atlas: Target genes

Potential target genes for RFX1

Query protein: RFX1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457514 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX1's Target genes

◢ RFX1: Average

◢ SRX5457513: Hep G2

◣ SRX5457514: Hep G2

◢ SRX2424672: K-562

◢ SRX2424673: K-562

◢ SRX2424777: K-562

◢ SRX2424778: K-562

◢ SRX2423398: MCF-7

◢ SRX2423399: MCF-7

◢ SRX2424431: MCF-7

◢ SRX2424432: MCF-7

◢ RFX1: STRING

QTRT2
CCDC191
TTC23L
SDCBP2
ZNF497
ACAP2
AP1S1
CCDC30
CEP112
CFAP36
PPAN-P2RY11
PPAN
TPM3
DNAAF3
EFHC1
SPAG16
WFDC3
DNTTIP1
PES1
TTC30B
CACUL1
BCL2L1
STK19
DXO
RSPH14
NRSN2
RFC5
TP53BP1
RHPN1
NEK10
ZC3H10
CCDC34
MCM7
AP4M1
NAA40
CFAP54
FZR1
PUM1
LOC112694756
PELI1
SPATA2
STK11IP
FAM161A
CRNKL1
CFAP61
MOK
NCOA5
RNF139
DYRK1A
SF1
C1orf159
CCPG1
C15orf65
CYTH2
RPL35A
IQCG
SMG7
FOXJ1
TMEM9
RFX1
CSNK1G2
ZSWIM1
MOB3A
IZUMO4
ZNF473
VRK3
KIFC3
PTPN1
SEC61A2
DNAJC16
THTPA
UBE4B
TTC7A
MCFD2
PRMT5
JUND
SIPA1L1
MYADM
DAD1
ZNF184
LENG1
PRR3
GNL1
HSP90B1
COPS3
EFTUD2
CCDC103
THAP10
LRRC49
TOR2A
IPO4
NAP1L1
FAM120B
CFAP43
PPP1R12B
RNF5
AGPAT1
PIK3R2
SYS1
ZNF324B
TMX4
TCTN3
PROSER3
HSPB6
CCDC130
MEAK7
POLRMT
PPP2R1A
TSNAXIP1
RANBP10
DMWD
PKIG
C16orf46
FASN
UBE2O
AANAT
WDR54
C2orf81
JAM3
LRRC56
CARS1
MPC2
DCAF6
PAK4
OVCA2
TM9SF1
KLHL18
KIF9
PHOSPHO2
CCDC173
AHI1
CALR3
C19orf44
HSDL1
DNAAF1
RFC2
ID1
RAB36
TTC30A
ORAI3
ABI2
PNKD
TPGS1
MIB2
RUNDC1
PTGES3L-AARSD1
PTGES3L
PCF11
DYNC2I2
U2AF2
ZBBX
NR2F2
COPB2
SIK3
MFSD4B
LINS1
ASB7
CATIP
SGTA
MOCS3
DPM1
CCDC113
BRCA1
YIPF3
POLR1C
IFT172
STK32C
LRRC27
OTUB1
TCTEX1D4
BTBD19
METTL15
KIF18A
MBD4
IFT122
EFCAB12
SPATA33
C11orf49
ITFG2
IQCH
AAGAB
NUMA1
LRTOMT
PDE4A
ARL2BP
CHURC1-FNTB
CHURC1
RALB
HMGCS1
CHCHD3
MICOS13
HSD11B1L
DYNC2LI1
NUDT2
KIF24
MZF1
MED25
RSPH1
PIN1
ARL4A
POFUT2
TMEM67
CEP41
PDCD6
RNF40
CCDC189
ZBTB48
PRKCSH
CCDC151
EBNA1BP2
CFAP57
C7orf50
THNSL1
GTF2IRD2B
IPO11
C17orf97
SNRPF
TRIT1
DUSP3
TSEN2
ZNF768
BSG
NPHP1
SYT5
SPN
COG7
DSTN
BFSP1
ITSN1
CRYZL1
CDK4
PRKN
PACRG
LRRC73
DUSP6
PARS2
TTLL1
TBCEL-TECTA
TBCEL
E4F1
WDR35
GTF2E2
CPLANE2
DYNLRB2
ZNF862
PRKAR1A
FAAP24
CEP89
CTU1
KRT8
TMF1
C2orf73
KATNIP
GTF3C1
TRAPPC2L
GALNS
PREPL
CAMKMT
YWHAQ
PICK1
KIF3B
ABAT
RFX2
PMVK
DNAJA1
APTX
PBXIP1
IQCE
TRAF3IP1
LPIN2
MORN4
EIF2S2
ARFGAP1
RPP38
NUCB2
ETFRF1
CFAP94
SPCS1
GLT8D1
PPP1R21
TULP3
MAFA
RTF2
TMEM91
B9D2
NME9
TMEM53
ARMH1
DYNC2I1
ARMC9
ZC4H2
ENDOV
L3MBTL2
GOLGB1
RNF141
DCP1B
DYNLL1
DAGLA
CBX8
FHAD1
MAPRE3
MAN1B1
HSPBP1
WIPF2
DNAH7
SPATA17
GPATCH2
PCSK1N
COQ7
DHX40
UBXN2B
FKBPL
FAM204A
RALGAPA1
UVRAG
LRRC6
RFX3
JUN
HMG20B
POMT2
GSTZ1
IQCC
TSPYL4
DSE
CCDC74A
CXADR
ELMOD2
PRDM4
TMEM107
MRPL10
LRRC46
CFAP221
ELP1
ABITRAM
LMAN2L
SARAF
RABL2B
UBXN6
DNAAF2
RPF2
MSMO1
KMT5C
REEP6
PCSK4
CCDC74B
SHOC2
BBIP1
FOXO6
REPIN1
TSGA10
C2orf15
ZIM2
PEG3
FBXW7
TMX2
MED19
MLEC
ERCC1
SYVN1
POLR3H
SH3BGR
LCA5L
WDR90
RAB11FIP2
SPICE1
B9D1
YWHAE
G3BP1
CLBA1
YWHAZ
POLL
DPCD
TXNDC17
KIAA0753
DYNC2H1
MRPS21
NDUFA8
MORN5
P4HA1
FAM151B
UFSP2
RPS27A
CLHC1
FSIP1
C20orf27
TREX1
USP54
EFCAB2
SRFBP1
STOML2
TADA2B
CCDC96
NQO1
ANGEL1
INTU
VTA1
NMBR
BBS1
MIER1
DNAI4
TBC1D32
HM13
GTF3C4
DDX31
LYRM4
FARS2
TMEM231
HSPH1
THBS3
MTX1
ITGB3BP
EFCAB7
RND2
FBXL13
ARMC10
RIN1
TPCN1
IQCD
PANK2
MYCBP
CEP135
BDP1
E2F3
SREK1
CD68
SRSF7
TNRC6A
ACOX3
SFXN2
ARL3
BTBD3
KIF23
DNAJC1
ESRRA
HMGCR
INO80B
CFAP53
NDUFA5
TRIM36
ANKRD54
ZNF324
NME7
BLZF1
IFT57
TBC1D16
CCDC40
CENPH
RRP12
IFT22
GFER
HMGN2
FAM110A
MARCHF8
ACTR6
LRRC23
INTS8
PCGF1
KIF6
TIGD4
ARFIP1
ULK4
ODF3L1
XRCC1
PINLYP
CEP152
MSH5
SF3A1
CCDC157
CYSTM1
CSNK1G1
CCDC57
AGPAT5
TASP1
ERICH2
ARL13B
C2orf50
TAF6
CNPY4
ARRDC4
NEMP1
USP30
SPAG8
TEKT1
TRIP12
FBXO36
CNOT8
KLHDC10
DUSP18
BBS12
CYC1
RSPH3
FOXN2
MORN3
CEP162
NEK2
CFAP126
ALKBH5
WWOX
GAS8
MAFG
TXNL4B
DHX38
SPEF2
SIK1B
SIK1
WDR73
FANK1
PSMC3IP
L3HYPDH
JKAMP
PRR29
ASPA
SLC25A46
ZNF446
SAXO1
RRAGA
FOXN3
BRMS1
MARK3
SPG21
FAM227A
CBY1
AP2S1
SLC25A3
PCGF2
UBN2
POLD3
TTF1
AZIN2
FBXW9
ZFYVE28
CFAP99
TMEM234
EIF3I
PIBF1
DIS3
IFT81
RBBP6
FAM47E-STBD1
FAM47E
ZFP36L2
SPATA4
CCNB1
GPR107
WDR93
PEX11A
OSCP1
DYRK3
ERICH6
AP3D1
CIPC
PPP1R16A
BRD3OS
ERF
ALS2
ARMC3
LRPAP1
CYP46A1
STK33
KNOP1
CCS
CCDC87
CHN1
TEX2
DHX16
IP6K1
UBXN11
MYG1
LMBRD1
WIZ
TCTN1
C1orf194
MED31
C17orf100
LZTFL1
ZNF24
MORN2
DHX57
CDC37
RUFY2
CEP295NL
AKAP6
SEMA4B
ANKRD42
PGD
PCNX4
IRAK1BP1
MVK
TNPO1
SDE2
CEP43
HNRNPF
SLC27A1
EFCAB10
ARL6
SPACA9
AK8
TECPR2
CINP
OR2F1
C12orf71
TEX264
MAP3K14
ZNHIT1
PLOD3
THG1L
NAA38
CYB5D1
TMED10
CACFD1
MICOS10-NBL1
MICOS10
PIH1D2
NKAPD1
BSCL2
TOGARAM1
KLHL28
TOM1L2
DRC3
LRGUK
AOPEP
DRC7
CDH4
WDPCP
MDH1
KIF27
MRPS2
C9orf116
LETM2
BTRC
SPEF1
RABL2A
STXBP4
COX11
PCM1
CABIN1
MPZL3
UVSSA
ING2
WDR19
QTRT1
IFT74
PNMA1
C16orf71
ANKS3
PPP1R11
DCAF15
PLIN5
CENPS-CORT
CENPS
SLF1
KIAA0825
CLUAP1
C4orf48
NET1
ZNF84
GLRX5
ARMC2
PCOTH
MIPEP
CCP110
FSD1L
ZNF875
SORBS2
PNP
ZNF584
WARS2
TUBE1
FAM229B
STK35
NACAD
RSPH4A
AP1M1
LOC101928764
MTF1
NDUFS3
KBTBD4
ENTPD5
BBOF1
RBKS
BABAM2
CEP164
PLXNB1
CYSLTR2
GMPPB
BCLAF1
CFAP58
ZNF594
ZC3H3
STPG1
NIPAL3
XPR1
DNAH6
GET3
TCTN2
PSMB5
RASGEF1B
PSMB7
ZNF76
CACYBP
PKP4
CCDC148
DNAJC24
DCDC1
ZDHHC1
AGTRAP
PPM1E
FAM234A
VPS53
CCDC175
RPGRIP1L
FTO
TRUB2
COQ4
CCDC107
NBR1
CELF6
SHQ1
EIF2S1
ATP6V1D
HAT1
MKS1
KIAA0232
PHTF1
TENT5C
RUFY1
SAXO2
EFL1
DNAJC10
ZNHIT2
LOC390877
GTF2F1
ZSCAN5A
PACRGL
ODF2
ERI3
ENTPD7
SMIM6
ING1
NAT14
EML1
YOD1
PFKFB2
RER1
MORN1
GALK2
COPS2
SSX2IP
FAM214A
TPST1
SPATA18
GPR137
BAD
HYDIN
KTI12
GTF2I
PTPN13
FAM160A2
KIAA0895
TRMT5
SLC38A6
DNAH12
CCDC146
KIFBP
AJM1
SEC16A
C9orf163
ARF3
FAM86B2
MNS1
CFAP298-TCP10L
CFAP298
OXNAD1
DPH3
ZBTB40
GPN1
CCDC121
DENND2B
TOB1
STX18
GEMIN8
POLI
CATSPERG
ABCB8
LTV1
ARID4A
IQANK1
FAM83H
SFR1
HNF4A
ICA1L
ALMS1
DNAH10
ZNRF1
SDCBP
EIF4E3
NAA20
RPN1
PIFO
RPS6KA5
DGLUCY
DNALI1
TIMM21
FBXO15
ZNF664-RFLNA
ZNF664
CCDC92
SSBP4
DPY19L1
E2F8
MEAF6
C16orf86
CEP126
TCTEX1D2
KIAA1755
PPP1R42
GTF2IRD2
SF3B5
CDC14A
PRKAR2B
C11orf97
ANO3
EHD1
POLR3F
DZANK1
CCDC170
LOC728392
IQUB
SYBU
CCDC39
SLC25A14
DNAJB13
TSPAN3
FAM185A
FBXL14
ARHGAP39
STRN4
ATP7B
ALG11
IL15RA
LRP2BP
ANKRD37
ANKRD13D
ZNF709
MYPOP
TEDC1
TECR
DNAJB1
HSPA1B
CBX6
ARRDC3
RP2
SWI5
GOLGA2
LMLN
PEF1
FER
PRUNE1
MINDY1
TSPAN19
LRRIQ1
TTC26
TEX9
C7orf57
TDRP
TTLL5
ERG28
PLEKHG5
ZNF214
NLRP14
CFAP69
SPATA7
SMPD2
PPIL6
CATSPERB
HSPA12A
ENO4
FAM222A
TAOK2
SFI1
TOB2
PRKAR1B
RFX4
GNL2
UBL3
CAPS2
SNX25
CFAP97
SETD4
FKRP
DIXDC1
ZNF165
CIBAR1
ODC1
MINK1
MAPRE2
ITPK1
SWSAP1
TTLL6
TMEM209
CCDC32
TUB
BCO2
CLIC1
DNAJC25-GNG10
DNAJC25
TCP11L2
FAM104B
UBE2Z
INTS3
PSMA5
USP2
GPSM3
LRIF1
FAM183A
LRRC70
ATAD3A
SS18L2
SEC22C
SUGT1
RAVER1
UBFD1
EARS2
FAM161B
COQ6
RAD23B
TOMM7
AXDND1
NUP62CL
DNAAF6
DDX3X
MCAT
LIMS1
STX12
VPS13A
NUDCD1
ADGRA1
CYB561
ANKRD34A
POLD2
KIF14
COPZ1
AP3M2
JMJD8
PFDN5
HS1BP3
UBB
TRMT12
MUL1
PHC1
TTC12
MAPK7
NSFL1C
TSPAN4
HIGD2B
BBS4
TRIQK
AMPD2
EFHD2
CENPF
TBC1D19
CALML4
SPATA24
FAM227B
DTWD1
SLC25A27
CYP39A1
SERTAD3
SPAG1
TOR3A
CFAP74
PYY
NAGS
NEK11
ASTE1
RHBDD2
FER1L5
IP6K2
DENND6B
COMMD8
PHF20
NUMB
DNAL1
TMEM186
PMM2
CXorf58
CFAP73
C1orf189
CAMK2A
KCNK15
TTC8
STK36
RNF25
HPCAL4
ZNF398
KATNAL1
BBS5
ZNF487
PELI3
SLC10A2