ChIP-Atlas: Target genes

Potential target genes for OTX2

Query protein: OTX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX729712 | hESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
OTX2's Target genes

◢ OTX2: Average

◢ SRX2436021: D283 Med

◢ SRX2436022: D283 Med

◢ SRX2436059: D283 Med

◢ SRX2436060: D283 Med

◢ SRX2769830: D283 Med

◢ SRX2436029: D341 Med

◢ SRX2436030: D341 Med

◢ SRX2436037: D341 Med

◢ SRX2436039: D341 Med

◢ SRX2436041: D341 Med

◢ SRX2436043: D341 Med

◢ SRX2436046: D341 Med

◢ SRX2436048: D341 Med

◢ SRX2436050: D341 Med

◢ SRX2436052: D341 Med

◢ SRX702048: hESC derived ectodermal cells

◢ SRX702051: hESC derived ectodermal cells

◢ SRX702046: hESC derived mesendodermal cells

◢ SRX702047: hESC derived mesendodermal cells

◢ SRX702049: hESC derived mesendodermal cells

◢ SRX702054: hESC derived mesendodermal cells

◣ SRX729712: hESC derived neural cells

◢ SRX729713: hESC derived neural cells

◢ SRX11141592: hESC derived retinal cells

◢ SRX11141593: hESC derived retinal cells

◢ SRX702045: hESC HUES64

◢ SRX702050: hESC HUES64

◢ SRX702052: hESC HUES64

◢ SRX702053: hESC HUES64

◢ SRX814231: HRPEpiC

◢ SRX10976117: iPS cells

◢ SRX10976118: iPS cells

◢ OTX2: STRING

RGS9BP
ANKRD27
ADGRA1
SLC25A1
KLF3
HNRNPD
TMEM201
DKK1
GLT1D1
PNPLA3
RPL17-C18orf32
RPL17
AIPL1
FBXO46
WNT1
ZNF436
POLL
DPCD
LMOD1
ANXA2
MSI1
CCNA2
BFSP1
NUAK2
ZNF286A
PKDCC
CBWD5
KDM2B
RGS3
CRYAA2
CRYAA
TDRD7
NNMT
TAFA3
PPM1J
CBWD3
CBWD6
MAST2
FGD4
AXIN1
MRPL28
BRD4
DENR
IKZF5
ACADSB
DENND2B
ZFYVE19
DNAJC17
DMBX1
NR2E1
HMX3
FBLN1
RNASE12
RNASE11
TSKU
CFAP53
ALG10
KCNF1
ERICH6B
SEC22B
AGBL1
ADCYAP1R1
GXYLT2
MIDEAS
TET3
TNRC18
LOC100129484
RNF220
PCBP4
GPR62
IGDCC4
ASIC1
FAM107A
AFF1
HSPA4
JADE1
SPSB4
POU2F1
AKAP11
CLEC18C
BIN1
YTHDF2
SF1
BBS5
TTC23
LRRC28
FBN1
MEFV
BST1
ASF1B
MLLT6
FGFR2
RMC1
LRP2
KIAA1522
TMED7-TICAM2
TMED7
TMEM74
HIGD2B
BBS4
COLEC11
TYRO3
SH3BP5
ZFP36
PLEKHG2
TENT5B
RSPO1
SPATA5
NUDT6
MATR3
PLEKHB1
IGF2BP1
CDK12
CUL3
ZNF668
ZNF646
TRPM3
DNAJB6
ECE1
PDE12
DNAH12
SRSF2
MFSD11
SLC12A5
HCN2
EPHB3
OSGEP
APEX1
PIP4P1
PNP
DBX1
ZNF491
NAF1
SLC45A3
FAM227B
DTWD1
IL6R
ABCA7
GBX2
C2CD2
CYTH2
LEKR1
URM1
CCDC177
ADNP
CCNG2
CDR2
BBS7
PLAGL1
ALAD
POLE3
C9orf43
NEUROG1
SEMA3A
EML1
SRSF1
GAS1
TMEM14B
AGA
DHX9
SP5
INTS5
GANAB
GLRA1
GAL3ST2
DNASE1L3
CRB2
EMX2
CDX2
PTCH2
LZTS1
SEC23B
RPS11
RPL13A
SLC38A8
CS
PREX1
GPC6
GHRH
XKR7
NOC4L
DDX51
RRM2B
MGST1
CDH10
APBA2
SMIM5
SCHIP1
ZNF626
DLX1
DUX4
SEBOX
VTN
SARM1
ZNF48
ZNF771
CCK
NBPF1
CUEDC1
GZMK
ANKFY1
CLEC18A
AKNA
GGA2
RPN2
MROH8
TRMT10A
MTTP
ABAT
CD82
PRKRA
PJVK
PACSIN1
NPEPPS
RTKN2
PRUNE2
GTF2IRD1
UBC
C5orf47
PIK3R5
S1PR5
PEX5L
ADGRL3
SELENOP
MALSU1
HNRNPH1
EPHA2
ESAM
SNX18
ASXL1
NMT1
DCAKD
CEMIP2
SEZ6
TRIL
FRAT2
CCDC33
CLASP1
IDNK
WNT7B
SH3GL1
SLC25A11
RNF167
PFN1
GP1BA
ERBB4
CLEC19A
EPB41L5
GRAMD1C
KHSRP
EOMES
DOT1L
PHTF1
COLGALT1
CYP1A2
SECTM1
UNC119
SKA2
PRR11
FAM200B
PTPN4
KLHDC8B
CCDC71
TAB2
KLF12
TNC
SIPA1L1
TEX37
NEK2
SH3D19
CORO2B
DLG4
ACADVL
UBFD1
EARS2
ERCC6L2
ZNF503
ISYNA1
PALLD
ADAT1
CDIPT
ZNF219
TMEM253
SSBP4
ZNF609
DNMT3A
CRLS1
ITGA6
CACNA2D4
THAP12
GVQW3
MTREX
DHX29
KANK1
NQO1
CALB1
GNB3
TFB1M
PLEKHA8
SKIDA1
MLLT10
PRSS55
VGLL4
COX7A2L
VWA5B1
CGGBP1
ZNF654
CCPG1
C15orf65
TARS1
S100A10
ENPP2
KCNA1
ARNT
INAFM1
FZD8
USO1
CBX5
HNRNPA1
MCF2L
H4C15
H4C14
H3C15
H3C14
PRR36
DICER1
STXBP4
COX11
DCLRE1B
AP4B1
ISL1
PKMYT1
ZCWPW1
PPP1R35
MEPCE
HHIPL1
CCDC85C
UNC5A
MOCS3
DPM1
MBNL1
CNTN1
RAX
PPIP5K2
GIN1
NCOA4
IREB2
MEGF9
TMEM234
EIF3I
KMT5A
UBOX5
FASTKD5
ZNF576
IRGQ
FAM228B
TP53I3
SF3B6
SLU7
PTTG1
ABCC1
SKA3
MRPL57
USP38
PGBD4
EMC7
TRIM2
HNRNPA0
ZNF775
CBR4
REPIN1
RASSF10
LIMS2
CTNNB1
CDK17
ETNK1
GPR17
KRT18
NUFIP2
TRIB3
VPS50
HEPACAM2
MAP1B
PRDM12
BAIAP2
SDC2
PDCD6IP
TAGLN3
FBN2
BAHCC1
ZNF292
AGAP1
NCOA3
CCDC146
GPR155
RCN1
RUNX1T1
TCOF1
PPP2CA
GORASP2
NUP85
TRIM64B
SOX1
WSCD1
SCAF11
C1orf216
SLC7A7
MAML3
MRPL52
DDX50
AJUBA
DYNC1I2
RWDD2B
USP16
GCNT2
FDXACB1
C11orf1
ALG9
SALL2
STXBP2
TTF2
XAB2
PCP2
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
SPO11
IZUMO2
TMEM94
PFKFB3
RNF31
PSME2
EMC9
BZW1
PSME1
FITM1
CFAP20
NDUFB4
NCSTN
COPA
TTC17
GOLGB1
RPS6
SFR1
ADCY7
RWDD1
FER
AGO2
WDR7
MPP2
TENM2
IPO11
DIMT1
NDUFV2
CSNK1G3
TNFAIP8L1
RBM14-RBM4
RBM14
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HTR3D
CAMK2N2
SOX6
RABGAP1L
ABL2
VPS72
B3GALNT2
SNCAIP
AOPEP
CNOT4
VCL
GPRC5D
RP1L1
LRRC57
HAUS2
FOXR1
SMTNL1
ABCC11
FLACC1
DNAJC19
ACVR1
TTC3
PIGP
TPD52
ARHGAP22
GABARAPL1
HAAO
FAM161A
HARBI1
ATG13
MSANTD4
KBTBD8
HEATR1
CAMK1D
CSPP1
MRPL58
KITLG
PCTP
FHOD3
PCARE
MYCT1
PROKR1
RGL3
SIAH2
SYBU
MCM6
CLTC
TCTN2
SLTM
TOR1B
UBXN4
NEBL
SNRPE
BCL2L13
ARSI
RARRES1
TNNI1
ACBD6
CAMK2A
MAMDC2
ZBTB8A
SLC35F3
FABP6
MAK
DNAJC28
YEATS2
ATXN7
NFIB
RAMP1
CBWD2
NOVA1
ZDHHC22
PHC2
RCBTB2
KCNIP4
ACTN2
HOXC4
TPX2
PLAC8L1
RNMT
FAM210A
NIPAL1
CNGA1
MFAP3L
PELI3
RALYL
CCDC181
TMEM64
GUCA1A
CDK4
IFNA8
TSPAN31
RIMKLB
MUC20
STAT4
CD300LG
CITED4
WBP11
C12orf60
MARCHF9
DCBLD2
TUBA1C
UNC5C
RFX4
ZFAND3
TRAK2
STRADB
PARS2
CDHR1
SLC28A3
CBWD1
AHR
COX14
B3GLCT
ANKRD28
SLC19A2
CRHBP
GEM
CCDC60
RBFOX2
MED7
SUPT7L
SLC4A1AP
KNOP1
IQCK
ANP32B
OGFOD1
NUDT21
INSR
LIMA1
TIGAR
HACD2
TMEM200A
BCAR1
RPGRIP1
PDE6H
CLPB
TEX2
HNRNPC
BTBD11
LMOD2
GREB1
ARHGDIB
NFATC2IP
DHRS3
TBC1D23
SLC38A2
PRPF3
TGFBR3
HNF4G
SH3RF3
EGFLAM
ZBTB18
ATXN7L3B
GABRR3
AVPR1B
PRKAG2
TULP4
KRCC1
SMYD1
WBP1L
ZNF608
ARSG
MLLT3
PSMD4
HSF1
BOP1
ADGRF5
MDK
NRCAM
PIP4P2
MRC2
LPCAT1
PCBP2
OR14A16
CHRM4
EPS8
ASPHD2
UBE2E2
BCO1
IGSF11
TIMELESS
ALDH2
TRIM38
TRIM58
ATP6V1G3
WLS
SLC5A12
KCNV2
BPIFA2
DYRK4
EYS
SQOR
IL15
PXN
CNKSR3
CNGB3
MIP
ENPP7
SPACA6
GRAMD1B
GPR19
MOK
FUOM
FGGY
TBCE
MPP7
PRR23D2
PRR23D1
RMDN2
JPH2
EPO
SYTL5
CCDC136
BFSP2
ZBTB24
ABCB1
CKAP4
NDFIP2
C1QL1
NPR3
WSB1
PPEF2
AP1S1
HSPA12A
ENO4
RXRG
DDHD2
ST6GALNAC5
PIK3C2B
DIAPH3
RFK
TSNAX
RAD54B
VGF
SCYL3
CLDN10
CHMP2B
RPRM
FSBP
LAMTOR3
WDR62
THAP8
DIPK1A
PRDM1
NECAP1
CREM
IMPG2
SLC35F2
NDUFV1
USH2A
CDH2
NAA25
ADAMTS9
PPRC1
ISL2
SLIT1
TXNDC2
MBD2
MAN2A1
RND3
TPH1
GPR63
CCND3
TMEM219
KRT80
UBAP1L
RAB3GAP2
MMP3
ASMT
PID1
CACUL1
TMEM123
MFSD4A
PDZRN3
RRAGC
REEP1
SLC38A11
OTUD7B
AIG1
RPL7
RDH10
DMXL1
ANKS6
DCAF8
ANKK1
DNAJC3
ANO6
RAB3IP
TPM3
FBXO10
GNAI2
PRLHR
DNMBP
OR1M1
DDX59
DPYSL3
SGK1
TAF12
CHN2
NFYB
H2BU1
H2AW
EXOC7
PCBP3
CDK5R2
PRDX1
PRRC2B
RUBCN
FAM174B
ISY1-RAB43
ISY1
GGACT
ARF4
NBEA
MAB21L1
HEATR4
SMOC1
HPD
ACOT2
BRIX1
LIMS1
RC3H1
ANK1
C12orf42
TFPI2
RASSF8
C1orf54
APH1A
CC2D2A
H4C3
H1-6
GNGT1
TSPAN14
LGSN
AGMO
BBOX1
CFL2
SMARCD2
PPFIBP2
ANKRD7
B3GNT2
C17orf58
GOLGA1
LNPEP
DLD
PARD6B
EEF2K
PRTG
CYP19A1
CPLX2
TRIB1
TMEM30B
IGSF9
STAU1
PATZ1
CLDN2
COQ10B
TMEM31
SRP9
PSMD9
AKNAD1
LDB3
OR11L1
GADD45A
BCAT1
DNAJC21
DSCAML1
SCAMP1
CNTN4
KLF17
NHP2
TDRP
GSG1
PAM
HIPK1
FMO2
PSMB2
ERICH6
DCN
MGP
OR1J4
OR1J2
RPUSD1
GNG13
CHTF18
ZNF322
PCNX1
WWOX
AP4E1
EBNA1BP2
CFAP57
ATP1B4
BAZ2A
LIMD2
PROX1
GPR158
ZMAT5
UQCR10
MAD2L1BP
GTPBP2
GFRA1
ZNF211
RAB3GAP1
RIPPLY1
HDDC2
AQP2
C1QTNF7
ZC3H11B
CRISP1
RIIAD1
CELF3
OTP
TP53I13
ABHD15
GPR157
MYBPHL
DNAJB12
EDDM13
NRG1
SUPT6H
SDF2
PGA3
NEK10
RPA3
ARHGAP28
PDIA5
SNX25
CFAP97
CXCR1
DUSP5
HIVEP2
SPAAR
PHACTR2
ADCY2
EPB41
PKN2
MPP4
NEDD4L
JMJD1C
ZNF326
PGA4
UBE2V1
FAR2
ANXA4
SOX5
MBD4
IFT122
NOL11
PBX3
RSPH9
CTBS
LARGE1
DCD
RFX3
FAM78A
TNR
CCDC102B
BRWD1
APP
EXOSC5
BCKDHA
PHLDA1
OSBPL1A
ROBO4
SPDEF
FHAD1
TMEM19
BEST2
ERLIN1
PIAS3
RPTOR
SLC44A2
MCF2L2
ANGPT1
VWDE
PGA5
ELMOD2
CYP26C1
ATP5F1B
RAB33B
MED1
LRIT2
PARM1
FMN1
STARD13
EBF3
LACRT
WASHC1
UBE2E1
KLHL8
MESP1
OXR1
DDX10
ADCY1
RUFY3
CCDC43
CHI3L2
EML2
GCNT3
KIF21B
DDX6
CAPNS2
AKR1B15
UTP4
DERPC
CHTF8
FLVCR1
CTHRC1
LOC105372977
USP2
ODAM
FCGR2A
FBF1
RD3
NUP93
GJD2
THSD7A
NBN
NECTIN3
FABP12
RORB
GATAD2B
CYTH3
CHODL
PITX2
LRRC53
UTP3
PCDH8
SPATA45
EPHA4
ABCA9
TMCC1
SMAD5
C3orf33
IRF2BP2
FHL1
TMEM248