ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745539 | Cortex
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◣ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Tex33
Cwc22
Npm2
Vmn2r105
Ube2i
Atxn7l3b
Agtr1a
Thrap3
Pcbp2
Rbm25
Mrpl48
Hbb-bt
Hbb-b2
Odf2l
1110004F10Rik
Eif4h
Szrd1
Atp6v1g1
Psg23
Ranbp2
Srsf11
Lrrc40
Hbb-bs
Hbb-b1
Npas4
Gm39773
Hdhd2
Trdmt1
Prpf39
Tmprss5
Ric8b
Wdr41
Myl4
Cdc27
Sharpin
Maf1
Rcn2
Zfp112
Ube2l3
Mkln1
Orc4
Mbd5
Sdhaf2
Cpsf7
Rab2a
Hnrnph1
Prcc
Klhl9
Atg4c
Psmd12
Pura
Cnbp
Vcp
Slc36a2
Mrpl58
Ogfr
Armh3
Rbm12b1
Fip1l1
Psph
Cct6a
Setmar
Mapk8ip3
Usp14
Tbc1d32
Psmd14
Tcea1
Copb1
Mfn2
Glra1
Dhx30
Endov
Kat7
Rbm39
Rmi1
Hnrnpk
Skp1
Zdhhc1
Tctn1
Casd1
Sun1
Smarce1
Snrpd1
Leng8
Taf8
Utp11
Rnf14
Hectd1
Elavl1
Atp5g2
Eif2s2
Actr1a
Ube2e1
Slfnl1
Kdm3b
Slc25a36
Brk1
Apc2
Nupl2
Tmem141
Tmx4
Cd81
Fam98b
Hnrnpm
Pdcd6ip
Snx4
Fam120b
Ythdf2
Nbr1
Brca1
Pskh1
Zfp12
Smndc1
Rpgrip1l
Fto
Gm5617
Dele1
Uqcrc2
Rbm12b2
Rraga
Rab5b
Scamp2
Galnt11
Eri3
Rab11b
Glo1
Cfap410
Fbxw5
C8g
Txnl4a
Gm16286
Rbbp6
Eef1a1
Cibar1
Mrps28
Dusp11
Dis3l
Psmd7
Rasgrp3
Tia1
Rtcb
Hsf1
Bop1
Rnf138
5031439G07Rik
Sf3a1
Ccdc157
Psma2
Mrpl32
Psmc6
Exo1
Clk3
Rdh14
Zmat5
Uqcr10
Pank3
Tmem17
Tax1bp1
Smu1
Srp54c
Srp54b
Actr8
Gosr1
Sem1
Rab18
Eef1akmt2
Polr2m
Lmbr1
Rnf215
Nek4
Slc25a3
Dhx15
Nenf
Lman2
Plpp7
Exoc2
Dnm1l
Tor1aip2
Tor1aip1
Zfp963
Ipo7
Smarcad1
Stambp
Ubr3
Dlst
0610009B22Rik
Pan3
Rtf1
Hps5
Gtf2h1
Prmt6
Actr2
Eaf2
Usp5
Cdca3
Naa38
Cyb5d1
Iqcb1
Ice2
Fam168a
Uqcrfs1
Zfp62
Inpp5b
Hnrnpul1
Mettl25
Ccdc59
Mtpn
Smim13
Fhit
Pex7
Dtwd2
Hmgn1
Usp47
Gnl2
Fbxo41
Oxsm
Ngly1
Oxnad1
Dph3
Cpsf1
Ibtk
Pink1
Rps29
Zfp26
Map3k3
Zfp866
Rai1
Dnajb13
Ythdc1
Chtop
Hps3
Mlf2
Zfp438
Olfr822
Cd36
Dennd6a
Zc3h18
Cacng2
Tcp1
Mrpl18
Hsd17b12
Tlk2
Zscan25
Clpx
Ptpn23
Vps51
Cox14
Rabl6
Ccnt1
Anapc10
Abce1
Tm9sf2
Phf7
Pef1
Bap1
Slc25a27
Cyp39a1
Jagn1
Wdr33
Ptbp2
Nup214
Scaf8
Trim44
Zc3h4
Ino80d
Arf2
AW549877
Supt6
Sdf2
Ppp5c
Pgap2
Nup98
Vamp3
Pcbp1
Zdhhc13
Magoh
Tspyl1
Tmem43
Chchd4
Kiz
Slc10a7
Rbmxl1
Amz2
Ncl
Elp1
Abitram
Zbtb21
Akap8l
Btbd9
Vps37a
Cnot7
Glg1
Slf2
Atp5l
D2hgdh
Vdac1
Lrrc57
Haus2
Ttc7b
Eif3e
Lig3
Slc36a1
Luc7l
Ptrhd1
Cenpo
Mff
Gpd2
Cul1
Zkscan1
Cul5
Asmt
Wdr34
Cd300e
Ddx23
Narf
Dus4l
Cog5
Rp9
Zfp398
Ankrd54
Lnpk
Nxf1
Napa
Zfp871
Micos10
Rptor
Hnrnpa0
Ssr3
Serinc1
Scarb2
Ammecr1l
Sltm
Tnrc6a
Opa1
Rfc4
Sema4d
Clcc1
Rad23b
Ddrgk1
Farp2
Eif2ak4
Ankle2
Dnajc1
Aatf
Zc3h12c
Sspn
Sike1
Dnajc25
Rplp0
Zfp386
Cbr4
Ints6
Hacd3
Arih1
Clk1
Atp5g3
Itgb1
Crppa
Spg20
Zkscan3
Lpin1
Ehmt2
Psma3
Cbfa2t2
Iba57
Magohb
Spata45
Srebf1
Usp24
Rps13
1810013L24Rik
Tomm70a
Oxa1l
Rhbdd1
Zfp672
Nacc1
Pdia3
Catsper2
Uqcrh
Lrrc41
Srp54a
Lyrm1
Dcun1d3
Kpna6
Prnp
Prn
Ccdc9
Naa30
Nup205
Bub3
Wdr77
Atp5pb
Nae1
Car7
Zfp746
Arih2
Pkd1
Klhl42
Hipk3
Phrf1
Snrpe
Bmt2
Malsu1
Tgfbrap1
AI597479
Mmadhc
Ift52
Zbp1
Katnal1
Senp8
Myo9a
Capn2
Stx18
Arf4
Smg9
Snx2
Edf1
Qtrt2
Ccdc191
Dennd10
Tmem231
Wbp11
BC049715
Zfp263
Hexim2
Sel1l
Ndel1
Sertad2
Atp5b
Ubxn7
Akt1
Zfp1
Napepld
Eral1
Rpl27a
Inpp1
Usp40
Herpud2
Eif4g2
Capn7
Osgin2
Setd7
H4c1
Zbtb8os
Rbbp4
Zfp319
Usb1
Gpam
Saraf
Tet3
Rexo1
Cers2
Anxa9
Pja2
Amfr
Rpl19
Hspe1
Hspd1
Thap3
Sf3b1
Ywhab
Ccny
Dyrk1b
Sugp1
Mau2
Fam174a
Vps35
Orc6
Phc3
Prpf8
Pdhb
Zdhhc21
Ppp3cb
Sf3a2
Plekhj1
Setd5
Nfkbia
Rhot1
Sec13
Ruvbl1
Ahctf1
Lpcat1
Trim27
Tbce
Ssrp1
Ccnt2
Tmem115
Srsf1
Senp6
Nckap1
Rwdd2b
Psma1
Mios
Zfp637
Tbc1d19
Cdip1
Uhrf2
9430015G10Rik
Mettl9
Ccnl1
Twf1
Ldah
Bpnt2
Fbxo7
Marchf5
Cpeb3
Strap
Fbxw4
Tnks2
Scaf4
Gm10509
Prkacb
Ypel5
Ppp6r2
Spink10
Fbxo38
Pdpr
Zfp607b
Map3k10
Ep400
Urgcp
Usp22
Cct2
Tmem135
Dzip3
Cip2a
Med15
Cct5
Atpsckmt
Pafah1b1
1700066M21Rik
Fbxo4
Slc25a4
Repin1
Hddc2
Kat5
Pdcd6
Gm3448
Gm3417
9030025P20Rik
Kdm4c
Ifi47
Ccdc90b
Rpl30
Cnih1
Zfp551
Zfp638
Ddx50
Ehmt1
Ntmt1
Spag9
Sec61a2
Phykpl
Dcp1a
Gtf2ird2
Rsbn1
Arl5a
Opa3
Ociad1
Rpl3
Smarca4
Cbx1
Retreg2
Cnppd1
Zmynd11
Rnf10
Efr3a
Ift22
Dgcr2
Rnf7
Afg3l2
Mcl1
Rab11fip5
Selenok
Arf5
Sik3
Pafah1b2
Oma1
Socs6
Smarcb1
Kifbp
Mtdh
Gpatch8
Smim7
Map1lc3a
Zscan22
Mat2b
Ola1
Exoc6b
Nudt19
Arl14ep
Arhgap39
Pnn
Fam32a
Mfsd12
Scyl1
C87436
Ykt6
Npdc1
Rc3h1
Rbm27
Snx17
Eif2b4
Sec16a
Sap130
Nudcd1
Eny2
Pgap4
Mynn
Rbm22
Maml1
Cds2
H4f16
Sod1
Zbtb44
Tada1
Sult4a1
Rab40c
Prr3
Gnl1
Msmo1
Srpk1
Vbp1
Cacul1
Larp1
Sugp2
Armc6
Psmb5
Unk
Trpc4ap
Ythdf3
Cbll1
Rsrc1
Inpp5f
Chmp3
Gbf1
Ppp6r1
Flot2
Prpf19
Zfp74
Sugct
Mplkip
Rab3a
Far2
Smim10l1
Arl8a
Surf4
Stkld1
Mrps36
Taf1d
4931406C07Rik
Tomm20
Ankrd17
Borcs7
Hspa8
Atxn2
Dnal4
Scrt1
Pycr2
Rfesd
Nsd3
Zdhhc20
Rragc
Zfp113
Pla2g15
Naa15
Mrps9
Shprh
Idi1
Cct8
Fam160b1
2300009A05Rik
Actr3
Ica1
Nckipsd
Smim11
Zfp358
Son
Dennd6b
Cnot3
Megf8
Pfn2
Zkscan8
Dennd4c
Mrps26
Ttc9c
Hnrnpul2
Rnf146
Morc2a
Tent2
Pitpna
Setd2
Zfp868
Rbm18
Mrrf
Nup153
Mapk9
Pomt2
Gstz1
Tmem87b
Zfp874b
Gtf2f1
Cox6c
Sqstm1
Zfp354c
Ppp4r3a
Btrc
Coq2
Psmb2
U2surp
Rnmt
Fam210a
Lsm2
Tra2b
Fbxl4
Ndufb1
Cpsf2
Usp36
R3hdm4
Kiss1r
Ube2j1
Ankrd13d
Taok1
Capn15
Mettl4
Rnf13
Trip11
Eif3a
Dido1
Top2b
Gyg
Klhl24
Iqsec3
Rsl1d1
Hagh
Fahd1
Kif1a
Phospho2
Ccdc173
Pip4k2b
Gdf3
Ube2o
Anapc4
Myadm
Dynlrb1
Zfp943
Zfp942
Zgrf1
Larp7
Zfp143
Nono
Naa60
Urb2
Taf5l
Zwint
Ubxn8
Gm33989
Ubn2
Ulk2
Med17
Zzef1
Cyb5d2
Rplp2
Mob4
Tmed10
Stau1
Atp6v1e1
Appbp2
Pigq
Ssu72
Fam76a
Supv3l1
Ankrd11
Asah1
Gpr75
Srek1ip1
Cwc27
BC048403
Rap1b
Pmm1
Drg1
Unc50
Coa5
Iws1
Gxylt1
Ate1
Elk4
Ssh1
Cluap1
1700037C18Rik
Hmbs
Rab1a
Mlh1
Epm2aip1
Slc45a1
Cops3
Drap1
AI837181
Serpinb6a
Ripk1
Hspa5
Dus3l
Polr1d
Lnx2
Trub1
Tom1l2
Drc3
Lrrc58
Ilkap
Ckap5
Recql4
Lrrc14
Txndc11
Zcchc7
Zfp334
Bnip3l
Jakmip3
Kif13a
Dennd1a
Hid1
Rilpl2
Map2k2
Zc3h6
Paip2
Gtpbp8
Cox8a
Gramd1a
Ercc1
Srp9
Hdac2
Eif3m
Dnaja1
Prdm15
Arfgef2
Trim32
Lysmd4
Trrap
Actb
Ccnl2
Galk2
Cops2
Rps6kl1
Aplp1
Mgrn1
Npepps
Mrps15
Gbe1
Braf
Farsa
Echdc1
Guf1
Ift57
Stpg2
Prkcsh
Ccdc151
Ube3a
Zfp87
Tubd1
Rps6kb1
Dcaf6
Calr3
1700030K09Rik
Zfp606
Gnas
Aco1
Scamp1
Arl2
Atp6v0e2
Nsfl1c
E130311K13Rik
Ppp1r2
Ppil4
Pnrc1
Rtraf
Slc25a32
Dcaf13
Lemd2
Gnb1l
Slc25a23
Atf4
Mpc2
Fsd1l
Rab11fip2
Brwd1
Ubap1
Rrp1
Ncor2
Zfp592
Ncoa4
Kat6a
Dph5
Ankrd46
Mllt10
Sidt2
Ptpn1
Mkrn2
Xpo6
Mocs1
Slc30a5
Gnpat
2810004N23Rik
Caml
Atp6v1c1
Stard3nl
Ubr2
Rab28
Rab30
Wrnip1
Itm2b
Xbp1
Selenoo
Ppp2r2d
Mapk1ip1
Scamp4
Adat3
Dock7
Nalcn
Tm2d1
Pttg1ip
Kif5b
Ahcyl1
Npm1
Zfp771
Zcchc9
Cand1
Taf9
Rad17
Ak6
Epb41l1
Vps54
H2bu2
Med23
Msh6
Btf3
Peli1
Ttll11
Myom2
Extl3
Elavl3
Rab39b
Atp6ap1
Mybbp1a
Tpr
Odr4
1600014C10Rik
Tpm1
Arid1b
Zfp37
Zfp706
Pcmt1
Lats1
Fbrs
Uqcrq
Rhbdd2
Tle5
Tbc1d9b
Arl6ip1
Rcbtb2
Caprin1
Ep300
Def8
Slc7a6
Tarbp2
Trak2
Api5
Ddx6
Rab22a
Dnaja2
Tdg
Kdelr1
Mark1
Caskin1
Sys1
Zfp799
Gls2
Yars
S100pbp
Fam131b
Mfsd14a
Yipf4
Gpr89
Pdss2
Cplx2
Fbf1
Ssr1
Ddx47
Tbc1d23
Tnpo1
Katnbl1
Vps26b
Ncapd3
Nepro
Carm1
Grk6
Tmem170b
Slc35b4
Ext2
Prelid3a
Tbrg4
Uqcrc1