ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745539 | Cortex
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◣ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Tcstv3
Cldn34d
Twist2
Tex33
Brox
Aida
Cwc22
Npm2
Plekhm2
Ankrd35
Olfr394
Axin2
Mdfic
Trarg1
Hbb-bs
Hbb-b1
Wfdc13
9430069I07Rik
Rnf135
Vmn2r105
Ube2i
Atxn7l3b
Gm5591
Agtr1a
Thrap3
Klk12
Pcbp2
Rbm25
Crebbp
Mrpl48
Tmem236
Hbb-bt
Hbb-b2
Odf2l
Esp34
Dyrk1a
Asb12
1110004F10Rik
Folr2
Olfr1047
Olfr806
Eif4h
Szrd1
Atp6v1g1
Psg23
Ranbp2
Srsf11
Lrrc40
Glp2r
Npas4
Gm39773
Hdhd2
Trdmt1
Prpf39
Tmprss5
Rlbp1
Fanci
Mavs
Ric8b
Rbp2
Wdr41
Myl4
Cdc27
Sharpin
Maf1
Gm35339
Rcn2
Zfp112
Ube2l3
Mkln1
Orc4
Mbd5
Sdhaf2
Cpsf7
Rab2a
Ccdc62
Hnrnph1
Prcc
Klhl9
Cnr1
Atg4c
Psmd12
Pura
Cnbp
Vcp
Slc36a2
Aadacl4fm2
Mrpl58
Ogfr
Dpys
Hps6
Armh3
Olfr20
Rbm12b1
Scfd2
Fip1l1
Psph
Cct6a
Setmar
Mapk8ip3
Arsg
Usp14
Tbc1d32
Psmd14
Tcea1
Ubqln3
Copb1
Mfn2
Glra1
Btnl1
Dhx30
Endov
Iqub
Olfr282
Wnt8b
Kat7
Rbm39
Rmi1
Hnrnpk
Accsl
Skp1
Zdhhc1
Has3
Tctn1
Casd1
Sun1
Smarce1
Snrpd1
Leng8
Taf8
Ccnd3
Utp11
Rnf14
A2ml1
Hectd1
Elavl1
Atp5g2
Eif2s2
Sufu
Actr1a
Cish
Slfnl1
Ube2e1
Kdm3b
1700093K21Rik
Slc25a36
Fancd2os
Brk1
Rps15
Apc2
Nupl2
Tmem141
Fcna
Ccdc183
Tmx4
Abhd6
Tmem125
Cd81
Fam98b
Hnrnpm
Pdcd6ip
Snx4
Fam120b
Ythdf2
Nbr1
Brca1
Pskh1
Zfp12
Col8a2
Smndc1
Rpgrip1l
Fto
Gm5617
Gimap5
Dele1
Uqcrc2
Rbm12b2
Rraga
Rab5b
Scamp2
Galnt11
Eri3
Rab11b
Glo1
Cfap410
Fbxw5
C8g
Txnl4a
Gm16286
Rbbp6
Eef1a1
Syde1
Cibar1
Mrps28
Dusp11
Ifna1
Dis3l
Ly75
Psmd7
Cyth3
Rasgrp3
Atp6v0a1
Rtcb
Tia1
Hsf1
Bop1
Rnf138
5031439G07Rik
Krt84
Ccser2
Sf3a1
Ccdc157
Psma2
Mrpl32
Gprc5a
Psmc6
Exo1
Clk3
Ankrd53
Rdh14
Zmat5
Uqcr10
Pank3
Tmem17
Tax1bp1
Smu1
Srp54c
Srp54b
Actr8
Gosr1
Sem1
Rab18
Eef1akmt2
Polr2m
Lmbr1
Mmrn1
Rnf215
Nek4
Slc25a3
Dhx15
Nenf
Lman2
Plpp7
Olfr1214
Exoc2
Dnm1l
Tor1aip2
Tor1aip1
Zfp963
Ipo7
Smarcad1
Stambp
Ubr3
Prox2
Dlst
0610009B22Rik
Pan3
Rtf1
Hps5
Gtf2h1
Prmt6
Actr2
Tmem88
Naa38
Cyb5d1
Eaf2
Usp5
Cdca3
Tekt3
Iqcb1
Ice2
Fam168a
Uqcrfs1
Zfp62
Inpp5b
Hnrnpul1
Tnfaip8l1
Mettl25
Ccdc59
Mtpn
Smim13
Fhit
Prr9
Pex7
Dtwd2
Hmgn1
Usp47
Gnl2
Fbxo41
Oxsm
Ngly1
Oxnad1
Dph3
Cpsf1
Ibtk
Pink1
Rps29
Zfp26
Thumpd1
Map3k3
Zfp866
Rai1
Dnajb13
Ythdc1
S100a13
S100a1
Chtop
Hps3
Lpo
Spag6
Mlf2
Zfp438
Olfr822
Olfr464
Cd36
Prl7c1
Dennd6a
Zc3h18
Cacng2
Tcp1
Mrpl18
Hsd17b12
Tlk2
Zscan25
Clpx
Ptpn23
Vps51
Tmem262
Iapp
Cox14
Rabl6
Ccnt1
4930415O20Rik
Anapc10
Abce1
Tm9sf2
Phf7
Pef1
Bap1
Slc25a27
Cyp39a1
Jagn1
Wdr33
Ptbp2
Nup214
Scaf8
Trim44
Zc3h4
Ino80d
Cyp3a59
Arf2
AW549877
Supt6
Sdf2
Ppp5c
Pgap2
Nup98
Vamp3
Pcbp1
Ttll8
Zdhhc13
Magoh
Tspyl1
Tmem43
Chchd4
Kiz
Slc10a7
Rbmxl1
Defb23
Amz2
Ncl
Elp1
Abitram
Zbtb21
Akap8l
Btbd9
Vps37a
Cnot7
Glg1
Slf2
Atp5l
D2hgdh
Vmn1r60
Vdac1
Lrrc57
Haus2
Ttc7b
Eif3e
Lig3
Slc36a1
Luc7l
Ptrhd1
Cenpo
Mff
Gpd2
Vapb
Cul1
Zkscan1
Kdm2b
Cul5
Asmt
Lcmt2
Adal
Wdr34
Cd300e
Ddx23
Narf
Dus4l
Cog5
Rp9
Zfp398
Ankrd54
Capsl
Lnpk
Nxf1
Napa
Zfp871
Micos10
Rptor
Hnrnpa0
Ssr3
Serinc1
Scarb2
Ammecr1l
Sltm
Tnrc6a
Opa1
Rfc4
Sema4d
Clcc1
Slc5a7
Rad23b
Itpa
Ddrgk1
Farp2
Eif2ak4
Ankle2
Dnajc1
Aatf
Zc3h12c
Sspn
Tal1
Sike1
Dnajc25
Rplp0
Zfp386
Cbr4
Ints6
Hacd3
Arih1
Clk1
Olfr741
Atp5g3
Itgb1
Spg20
Crppa
Zkscan3
Lpin1
Zbtb12
Ehmt2
Psma3
Cbfa2t2
Iba57
Magohb
Spata45
Srebf1
Usp24
Rps13
1810013L24Rik
Tomm70a
Oxa1l
Rhbdd1
Zfp672
Trmt1
Nacc1
Pdia3
Catsper2
Uqcrh
Lrrc41
Srp54a
Lyrm1
Dcun1d3
Kpna6
Prnp
Prn
Nrg1
Ccdc9
Naa30
Nup205
Bub3
Wdr77
Atp5pb
Nae1
Car7
Zfp746
Arih2
Pkd1
Mansc4
Klhl42
Hipk3
Alad
Phrf1
Snrpe
Bmt2
Malsu1
Tgfbrap1
AI597479
Mmadhc
Cyp2f2
Ift52
Zbp1
Katnal1
Senp8
Myo9a
Capn2
Atp6v1h
Stx18
Arf4
Smg9
Snx2
Edf1
Qtrt2
Ccdc191
Dennd10
Tmem231
Wbp11
BC049715
Zfp263
Hexim2
Sel1l
Relt
Akr1c18
Sh3kbp1
Ndel1
Sertad2
Atp5b
Ubxn7
Akt1
Zfp1
Zbtb42
Napepld
Eral1
Rpl27a
Inpp1
Usp40
Herpud2
Eif4g2
Igfbp2
Fblim1
Capn7
Osgin2
Setd7
H4c2
H4c1
H3c1
H1f1
Zbtb8os
Rbbp4
Zfp319
Usb1
Gpam
Saraf
Tet3
Rexo1
Cers2
Anxa9
Pja2
Amfr
Rpl19
Cacnb1
Hspe1
Hspd1
Thap3
Sf3b1
Ywhab
Ccny
Dyrk1b
Sugp1
Mau2
Fam174a
Vps35
Orc6
Phc3
Prpf8
Pdhb
Zdhhc21
Ppp3cb
Sf3a2
Plekhj1
Setd5
Nfkbia
Rhot1
Sec13
Ruvbl1
Ahctf1
Lpcat1
Tmem115
Arl10
Trim27
Tbce
Ssrp1
P2rx3
Ccnt2
Srsf1
Senp6
Nckap1
Rwdd2b
Psma1
Mios
Zfp637
Gga2
Tbc1d19
Cdip1
Uhrf2
9430015G10Rik
Mettl9
Ccnl1
Twf1
Ldah
Bpnt2
Fbxo7
Marchf5
Cpeb3
Strap
Fbxw4
Tnks2
Scaf4
Gm10509
Prkacb
Ypel5
Ppp6r2
Spink10
Fbxo38
Pdpr
Cct2
Zfp607b
Map3k10
Ep400
Kcnj16
Urgcp
Usp22
Tmem135
Dzip3
Cip2a
Med15
Cct5
Atpsckmt
Pafah1b1
1700066M21Rik
Fbxo4
Slc25a4
Repin1
Gm5111
Hddc2
Kat5
Pdcd6
Gm3448
Gm3417
9030025P20Rik
Kdm4c
Ifi47
Ccdc90b
Rpl30
Cnih1
Zfp551
Zfp638
Ddx50
Ehmt1
Ntmt1
Spag9
Sec61a2
Phykpl
Dcp1a
Gtf2ird2
Rsbn1
Arl5a
Opa3
Ociad1
Rpl3
Smarca4
Cbx1
Retreg2
Cnppd1
Zmynd11
Rnf10
Sqor
Efr3a
Ift22
Tssk1
Dgcr2
Rnf7
Prkn
Pacrg
Shisa8
Afg3l2
Mcl1
Rab11fip5
Selenok
Gcc1
Fscn3
Arf5
Sik3
Pafah1b2
Oma1
Socs6
Cbarp
Atp5d
Smarcb1
Kifbp
Mtdh
Gpatch8
Smim7
Map1lc3a
Zscan22
Mat2b
Ola1
Exoc6b
Nudt19
Arl14ep
Arhgap39
Pnn
Fam32a
Mfsd12
Scyl1
C87436
Ykt6
Npdc1
Rc3h1
Rbm27
Snx17
Eif2b4
Sec16a
Sap130
Nudcd1
Eny2
Pgap4
Irx2
Mynn
Actrt3
Rbm22
Maml1
Cds2
H4f16
H2aj
Sult4a1
Sod1
Zbtb44
Tada1
Rab40c
Prr3
Gnl1
Rabggtb
Msmo1
Srpk1
Vbp1
Cacul1
Larp1
Sugp2
Armc6
Psmb5
Plat
Unk
Trpc4ap
Shox2
Ythdf3
Pitx3
Gbf1
Cbll1
Rsrc1
Inpp5f
Chmp3
Ppp6r1
Flot2
Prpf19
Zfp74
Sugct
Mplkip
Rab3a
Far2
Smim10l1
Arl8a
Surf4
Stkld1
Mrps36
Taf1d
4931406C07Rik
Tomm20
Ankrd17
Borcs7
Hspa8
Atxn2
Dnal4
Scrt1
Pycr2
Rfesd
Nsd3
Letm2
Zdhhc20
Rragc
Zfp113
Pla2g15
Naa15
Mrps9
Shprh
Idi1
Camk2n2
Cct8
Fam160b1
Zfp358
2300009A05Rik
Actr3
Ica1
Nckipsd
Smim11
Son
Gm36712
Gart
Dennd6b
Cnot3
Megf8
Pfn2
Zkscan8
Dennd4c
Mrps26
Ttc9c
Hnrnpul2
Rnf146
Morc2a
Tent2
Pitpna
Setd2
Zfp868
Rbm18
Mrrf
Nup153
Mapk9
Pomt2
Gstz1
Tmem87b
Shisa7
Zfp874b
Gtf2f1
Cox6c
Sqstm1
Zfp354c
Ppp4r3a
Btrc
Coq2
Psmb2
U2surp
Rnmt
Fam210a
Lsm2
Tra2b
Fbxl4
Ndufb1
Cpsf2
Usp36
R3hdm4
Kiss1r
Ube2j1
Ankrd13d
Taok1
Capn15
1700031F05Rik
Mettl4
Rnf13
Trip11
Eif3a
Dido1
Top2b
Gyg
Klhl24
Iqsec3
Rsl1d1
Hagh
Fahd1
Kif1a
Phospho2
Ccdc173
Pip4k2b
Cd84
Smim17
Gdf3
Ube2o
Anapc4
Myadm
Dynlrb1
Zfp943
Zfp942
Zgrf1
Larp7
Zfp143
Ugt2b34
Nono
Naa60
Gna15
Urb2
Taf5l
Zwint
Asah1
Ubxn8
Gm33989
Ubn2
Ulk2
Med17
Zzef1
Cyb5d2
Rplp2
Pidd1
Mob4
Tmed10
Stau1
Atp6v1e1
Appbp2
Pigq
Nhlrc4
Ssu72
Fam76a
Supv3l1
Ankrd11
Gpr75
Srek1ip1
Cwc27
BC048403
Rap1b
Pmm1
Drg1
Unc50
Coa5
Iws1
Gxylt1
Ate1
Elk4
Ctnnd2
Ssh1
Cluap1
1700037C18Rik
Hmbs
Lypd3
Plekho1
Rab1a
Mlh1
Epm2aip1
Slc45a1
Cops3
Drap1
AI837181
Serpinb6a
Ripk1
Hspa5
Dus3l
Polr1d
Lnx2
Trub1
Tom1l2
Drc3
Lrrc58
Ilkap
Ckap5
Recql4
Lrrc14
Txndc11
Zcchc7
Zfp334
Bnip3l
Jakmip3
Kif13a
Dennd1a
Hid1
Snrnp35
Rilpl2
Tmem144
Map2k2
Maml3
Zc3h6
Syk
Paip2
Gtpbp8
Cox8a
Gramd1a
Ercc1
Srp9
Hdac2
Eif3m
Dnaja1
Prdm15
Arfgef2
Lonp2
Trim32
Lysmd4
Trrap
Actb
Ccnl2
Galk2
Cops2
Rps6kl1
Aplp1
Mgrn1
Npepps