ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21482114 | Ganglion cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◣ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Tal2
Ms4a10
Tcstv3
Kcng3
Slc10a7
Rbmxl1
Dph1
Rtn4rl1
Dhx32
Zfp979
2610528J11Rik
Aqr
Gpn1
Slc45a3
Rspry1
Psme3ip1
Pmvk
Wdr89
Phc2
Polr3k
Stk11ip
Zfp980
Rhof
Fam50b
Zfp600
Neurog1
Zbtb8a
Otop1
Cryba2
Cbx4
Snrpn
Snurf
Thap4
Frzb
Il18
Bco2
Anp32e
Homer3
Kpna1
Brox
Aida
Pou5f1
Zfp623
Mplkip
Vkorc1l1
Lin28a
Mindy4
Epb41l5
Tac4
Sacs
Slc16a3
Dnmt3a
Zfp960
Cyp51
Lrtm2
Zfp658
Syce3
Gpx4
Sash1
Gdf5
Fgf6
Ttc41
Hsp90b1
Stk38
Sox2
Rabl3
Gtf2e1
Khsrp
Myo10
Calr3
1700030K09Rik
Klf2
Esrrg
Optc
Alpl
Phc1
Lypla1
Trh
Scaf4
Tmem154
Clec12a
Foxd4
Rex2
Ccdc194
Sfxn1
Myh9
Mbtps2
Hsbp1
Usp37
Plcd4
Mrpl28
Pcyt1b
Nifk
Setx
Tomm20
Irgm2
Plekhg1
Lrrc2
Tdgf1
Hscb
Chek2
Ell2
Kat7
Zfp219
Ccno
Nfkbiz
Pdgfra
Tepp
Cngb1
Lrrn2
Nanog
Ear10
Fgf15
Prex1
Ifitm1
Mtch1
Etfbkmt
Fzd8
Abcf2
Fam25c
Mllt6
Nudt13
Surf6
Zcrb1
Pphln1
Tmem218
Cxxc5
Lima1
Gpr1
Rps19
Shmt2
Polr2e
Zmym4
Myd88
Acaa1a
Abca4
Car14
Tmem143
Syngr4
Slc2a1
Trim2
Mphosph8
Sap30bp
Recql5
Itga5
Zfp180
Sgk1
Dmtn
Prcc
Ppp2r2d
Mapk1ip1
Fsbp
Gba
Jakmip1
Ska2
Prr11
6720489N17Rik
Rab43
Mmut
Cenpq
Virma
Plch2
Lce6a
Trp73
Nrf1
Zyg11b
H2-Ke6
Ring1
Gm3604
Zfp9
Ncoa2
Gm5165
Hip1
Ing2
Zfp574
Grik5
Eif5a2
Srek1
Sfi1
Phyhd1
BC107364
Sufu
Actr1a
Soat1
Gse1
Ifrd2
Gtf2ird1
Rif1
Cotl1
Mcf2
Tstd1
Tma7
Ccdc51
A930007A09Rik
Fgf5
Tspan9
Nfkb1
Tmeff1
Zfp605
Gtpbp6
Fgl2
Gpc6
Otud7a
Shroom3
Prss30
Dhrs7b
Ogn
Ccm2
Prickle1
Cdk5r2
Epp13
Zfp791
Odaph
N4bp2l2
G6pc2
Cdh1
Casq2
Galnt16
Tgfb3
Ift43
Epop
Ptrhd1
Cenpo
Zfp97
Pla2r1
Arhgap32
Nufip2
Kctd7
Fgfr2
Sulf1
Mtf2
Med16
Lrrc4c
Bcl9l
Txlng
Eif1ad
Banf1
Podxl
Magi1
Pifo
Rpl22
Trim35
Itgb8
Ypel2
Foxa1
Zfp386
Hvcn1
Vrtn
Poc5
Psmb8
Cpsf6
Wnt7b
Id3
Tef
Rbm44
Calml4
Irgm1
Zfp946
Zfp622
Fabp12
Tmem88
Naa38
Cyb5d1
Cox7a2l
Zfp36l1
Mdm4
Supt6
Sdf2
Adgrv1
Slc35b1
Mrps28
Hs6st1
Trpm7
Raet1e
Raet1a
Tcf7l1
Trim33
Ctdsp1
Zfp972
Alg8
Npcd
Cbx6
Pkdcc
Uqcrq
Gdf9
Arhgef26
Slc19a3
BC052040
Inppl1
Cybb
Cldn34d
Men1
Ephx2
Sall4
Slc7a3
Heatr1
Ctxn2
Lmln
Tnrc6b
Olfr995
Tprgl
Ppp1r1a
Znfx1
Rps23rg1
Os9
Dlx1
Cwc25
Xxylt1
Lclat1
Tbc1d5
Prrx1
Fzd10
Ramp2
Oas1g
Pklr
Kdm2b
Pcdhgc5
Pcdhgc4
Rgs22
D7Ertd443e
Vps8
Polr3b
Riok2
Tmem125
Btbd17
Gpr142
Zfp729a
Hk1
Smim7
Dusp6
Sox12
Snx11
Anxa11
Rfx4
Banp
Car5a
Nipbl
Cep170b
Qser1
Fxn
Gm38396
Mthfs
Pnpla6
Rere
Zfp871
Ccnd2
Olfr1358
Qrich1
Olfr1312
Gm51425
Zkscan5
Zkscan14
Sdhb
Rcn3
Ccn2
Klf16
Pik3r4
Smim26
Nkx3-1
Zscan22
Mettl15
Kif18a
Lhx9
Irf2bpl
Fgd4
Fgf4
Dusp4
Barhl1
Marchf9
Parp10
Ctcf
Grina
H2aj
H4f16
Camk2n1
Mettl3
Rnf32
Imp4
Ccdc115
Tigd2
Crb2
Gja1
Sall2
Otub2
Dnah3
Add1
Hspa9
Lsm4
Tmem159
Septin4
Pip4k2a
Tob2
Arfip1
Drosha
6030458C11Rik
Olfr806
Pigo
Ppp1r16b
Vmn2r12
Zfp317
Porcn
Miga1
Prtg
Thyn1
Acad8
Ssbp3
Pitx2
Kcnmb2
2810021J22Rik
Yipf1
Idh1
Cstf3
Pikfyve
Lta4h
Prr19
Pafah1b3
Plxdc1
Armcx1
Hnrnph2
Gla
Igsf10
Mcl1
Efs
Plin3
Ube2h
Cep120
Stk35
Rpusd1
Chtf18
Mis18bp1
Npepps
Npc1
Tomm7
Rdh12
Cdan1
Rbbp7
Caprin2
Slc39a14
Srsf11
Lrrc40
Enpp3
Smim19
Slc20a2
Gbx2
Mars1
Tjp2
Mecp2
Oscar
Ndufa3
Nupl1
Ldlrap1
Phf23
Gabarap
Dvl2
B4galt1
Cdiptos
Cdipt
Sh3bp4
Duxbl3
Duxbl2
Duxbl1
Bcar3
Ptpn4
Thoc3
Slc36a3
Lrp2
Prdm10
Pex14
Dffa
Gm3696
Map3k12
Sft2d1
Usp3
Tarbp2
Sobp
Epb41l1
Ccz1
Alad
Hnrnph1
P2rx7
Med6
Rrs1
Adhfe1
Grasp
Dcaf12
Slc38a9
Cdyl
Coq8a
Emc7
Tmem255b
D1Pas1
Prss48
Sp2
Arnt
Rnf157
Gbp6
Pax6
Serinc5
Dennd2a
Cd14
Tmco6
Cux2
Glrx2
Hsd11b2
Gng2
Nectin1
Gnmt
Igfbp2
Gm3173
Bod1l
Zfp36
Ubxn6
Hdgfl2
C1qtnf12
Akr1e1
Pla2g1b
Zfp428
Ifitm2
Ogdh
Zfp808
Ptpn13
Defb1
Htr2a
Cbx1
Slc44a5
Zbtb7b
Zfp985
Gripap1
Tor4a
Olfr1065
Cnn3
Olfr794
Klhl18
Kif9
Slc4a5
Acbd4
Ago2
Plcd3
Fbxo11
Ppp2r1a
Myh14
Cd160
Pdzk1
Ptch1
Lmo2
Gdf15
Naaa
Rps27a
Clhc1
Mas1
Dapp1
Dpp6
Cs
Gas1
Dpp10
Snrpc
Diaph1
Gm3558
Atp6v1fnb
Atp6v1f
Gucy2g
Car2
Nt5e
Dmbx1
Bbs4
Zswim4
Abcd2
Wrap53
Trp53
Mbp
Fam178b
Sult2a3
Plxnc1
Utp6
Pcna
Srgap2
Fam72a
Bphl
Acin1
1700123O20Rik
Gamt
Dazap1
Aatk
Slc5a11
Best2
Lrrc18
Scg2
Aqp4
Dspp
Ubp1
Ptgr2
Mycn
Ndufs8
Chd9
Plxnb1
Hells
Gcnt2
Sephs1
Meis2
Hoxc13
Gabarapl2
Zfp934
Erbb4
Tdrd9
Atp5mpl
Gsc2
Ess2
C130073F10Rik
Grm4
Spef1l
Ccdc30
2410137M14Rik
Osbpl2
Cipc
Ppp1r15b
Zfp128
Smim43
Ctbp2
Trim62
Rnh1
Slx4ip
Mkks
Zfp955a
Tspan31
Tescl
Glmp
Pcnx3
Map3k11
AI661453
1700001C19Rik
Ppp1r10
Mrps18b
Slc30a6
Il31ra
Flt4
AB010352
Slc7a7
Mettl8
Dcaf17
Mreg
Tmem107
Rhod
Lrpap1
4930550C14Rik
Tnrc18
Zmynd8
Mrps14
Abhd6
Phf10
Svopl
Slc25a44
Trip12
Fbxo36
Tdrd3
Numa1
Tnfrsf8
9230112D13Rik
Tpd52
Nrde2
Naa16
Gm20939
Ndufa12
Ubxn4
Slc1a5
Zfp65
Plk3
Rnf220
Rab3ip
Pnn
Sptbn4
Cnpy2
Gpr89
Nqo1
Evl
Blvrb
Zfp13
Dll1
Tcea3
Gbp9
Alg13
Thada
Upp1
Ppp3ca
Mxd4
D830030K20Rik
Chmp4c
Tyro3
Slc18a1
Atp6v1b2
H2bc4
H2ac6
Vps18
Arhgef17
Dmrta1
Znrd1as
Znrd1
Ccdc63
Rab7
Zscan10
Dchs2
Gm10710
Pes1
Zfp217
Donson
Hgh1
Nop53
R3hdm2
Nip7
Cog8
Ror1
Ccnc
Dnal4
Zfp955b
Sox4
Tlx3
Wdr34
Mup4
Tnnt1
Sntg2
1700122O11Rik
Lhpp
Sspn
Zfp935
Kmt5c
Ubap1
Dpysl3
Asap2
Ctc1
Pcsk1
Zfp608
Zfyve19
Dnajc17
Chchd3
Nampt
Rhbg
Ssc5d
Nat14
Cops9
Hoxa1
Kif22
Slco4c1
Actn4
Hjurp
A730008H23Rik
Atg4c
Npr1
Apool
G2e3
Pop7
Ints12
Gstcd
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Emb
Pde4b
Leprot
Rab34
Esrp2
Glul
Rpl23a
Tlcd1
Meioc
Ybx1
Gnpnat1
0610040J01Rik
Gm3752
Tmem139
Casp2
Rin2
Rtn4rl2
Taf12
Snx15
Trim11
Ankle2
Vmn1r1
Bcat2
Rbm42
Gls
Eloc
Slc4a2
Cdk5
Pih1d1
Aldh16a1
Mrps23
Nt5c3
Tyk2
Cbl
Terf2ip
Kars
Rnase9
Bbx
Hmgb2
Mad2l1bp
Ephb4
Glyctk
Tfr2
Coro1b
Pou2f1
Sp1
Rbm15
Zfp184
Mthfsl
Mob1b
Tbc1d32
Il1rapl1
Mtss1
Smim14
Msl1
Stap2
Mpnd
Fam76b
Cep57
Ube2k
Ube2m
Chmp2a
Ric8b
Chsy1
Gmeb1
Msi1
Ptma
Sergef
Zc3h13
Cobll1
Tiam1
Yeats4
Msra
Actn2
Zbtb45
Flrt3
Ankrd40
Dmkn
Erich1
Rasl2-9
Gm3636
Smarca2
Kbtbd8
Pmaip1
Baz1a
Eml2
Megf8
Fam181b
Hnrnpf
Mlf2
Fam227a
Cby1
Slc44a1
Fgf21
Fut1
Nup107
Araf
Ankhd1
Bet1
Atp5g1
Tyr
Adamts1
Coq10b
Adnp
Fem1b
Ptprj
Gm973
Rreb1
Dppa3
Txnl4b
Dhx38
Lurap1l
Gm6712
Tmem87a
Ganc
Olfr812
Kmt2a
Tmem37
Chst15
Stil
Gins1
Setd5
Prps2
Polr2f
1700088E04Rik
Dpep3
Zfp532
Pipox
Gnai2
Rpl13a
Rps11
Efemp1
Cdh7
Fundc1
Scn7a
Gpx1
Ccdc136
Nr6a1
Tuba1a
Kpna6
Pcbp4
Abhd14b
Abhd14a
Ldhb
Pitx3
Gbf1
Mphosph6
Nat10
Prxl2b
Rpl3l
Msrb1
Ube2t
Plcxd1
Zbtb6
Ints9
Hmbox1
Snapc5
Agbl3
A2m
Cd300ld3
3300002I08Rik
Relch
Pign
Mafb
Hadh
Zfp936
Mcf2l
Prkar1b
Dnaaf5
Synm
Zfp292
Mvb12a
Adssl1
Ovol2
Spry2
2410141K09Rik
Pex5l
Akp3
Grcc10
Ptpn6
Guca1a
Fbrsl1
Crot
Cubn
Taf6l
Pcdh8
Hdac9
Trrap
Chm
Zfp62
Zfp280d
Rgs20
Prox2
Dlst
Gm11634
Evi5l
Ficd
Npat
Atm
Tdrkh
L3mbtl3
Rad9a
Glcci1
Igsf8
Zzef1
Cyb5d2
Itpa
Ddrgk1
Cldnd2
Btbd19
Kansl3
Fer1l5
Chrm1
Slc25a40
Dbf4
Cntfr
Lrrc71
Ppard
Mpv17l2
Tbcd
Dixdc1
Dnm1l
Ptprn
Rpf1
Mcts1
Fbxl19
Ubl5
Fbxl12
Fgfbp1
Itfg2
Zdbf2
Dll3
Ezh1
Utf1
Hlf
Prss35
Sac3d1
Ufl1
Zswim8
Chchd1
Ccnyl1
P3h1
AU022252
Tmcc3