ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671902 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◣ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Pin1
Tmx4
Orai3
Tox2
Sema4b
Dnajc16
Casp9
Brox
Aida
Gdf1
Cers1
Mapre3
Xrcc1
Pinlyp
Cfap298
Trim2
Cnih2
Tcstv3
Lrrc56
Hras
Dusp18
4921536K21Rik
1700094D03Rik
Mks1
Muc1
Fam227b
Dtwd1
Ccdc30
Dad1
Abhd4
Tctex1d2
Mink1
Tmc3
Mapk8ip1
Cldn34d
Klhl18
Kif9
Cfap65
1110051M20Rik
Tctn2
Rlf
Thnsl1
Enkur
Wdr90
Rsph1
Pofut2
Tppp3
Ebna1bp2
Cfap57
Cfap20
Map9
Tmem9
Ttll3
Pitpnm1
Cdk2ap2
Mib2
Katnal2
Fam204a
3110082I17Rik
Fbxl16
Spef2
Lsm10
Crocc
Pifo
Kifbp
Ccdc39
Rundc1
Ptges3l
Eaf2
1700030J22Rik
Wdr66
Syt5
Stoml2
Tecpr2
Cinp
Mthfr
Clcn6
Hydin
Asb7
Kcnn1
E4f1
Ttll10
Gstt2
Tmem138
Cyb561a3
Jam3
Fam131a
Foxj1
Usp30
Mok
Ccdc13
Ppp2r1a
B9d1
Smg7
Zc3h3
Iqca
Cfap54
Ssbp2
Ccdc181
Cfl1
Etfrf1
Casc1
Efcab1
Traf3
Rtca
Dbt
Pigx
Cep19
Rfx1
Dnajc10
Crocc2
Cfap44
Slc6a19
Tctn1
Mindy4
Kif6
Wdr34
Dync2h1
Dcun1d5
Ccdc57
Ubn2
Cep112
Ak1
Bbs1
Klhdc9
Eif2b2
Anks3
4930451G09Rik
Acot1
Saxo2
Efl1
Prdm4
Tcea2
Sox18
Cabin1
Oscp1
Ubxn6
Hdgfl2
Agbl3
Micos10
Gar1
Map1a
Caly
Ift22
Cplane2
Tekt4
Prkcsh
Ccdc151
Fez1
Kdelr3
Jund
Iqcn
Nme7
Blzf1
Prepl
Camkmt
Etfbkmt
Ap1s1
Josd2
Aspdh
Pnma1
Rara
Tmem167b
Chchd3
Ufsp2
1700029J07Rik
Zswim1
Srf
Fam214a
Oxnad1
Dph3
Tube1
Fam229b
Ropn1l
Mbd4
Ift122
9530077C05Rik
Prmt5
Cenpf
Serf1
Bdp1
Mettl15
Kif18a
Mark3
Plch1
Rer1
Morn1
Arl6
Dnaaf3
Eif2s1
Atp6v1d
Nek2
Lztfl1
Lrriq1
Rpl30
Tmem209
Ssmem1
Cfap74
Rusf1
Sde2
Gm973
Itsn1
Cryzl1
Fanci
Bbs5
Mast3
Csnk1g2
Dmwd
Dusp6
Otub1
Nkiras2
Dnajc7
Stk32c
Lrrc27
Usp2
Dyrk1a
Tsnaxip1
Ranbp10
Ppp4r3b
Cyp46a1
Kti12
Armc9
Dcp1b
Pak4
Fbxw7
Tada2b
Ccdc96
Iba57
Ncoa5
Tpgs1
Madcam1
Cep162
Ccdc34
Sipa1l1
Tmem108
B9d2
Hmgcr
Alkbh5
Dlg4
Ccdc65
Dnajc1
Lfng
Dync2li1
Cdkl4
Copz1
Ptges2
Cherp
Pheta2
Naga
Dyrk1b
Zfp287
Dmkn
Akap11
Smpd2
Ppil6
Rfx3
Zbtb46
Ccpg1os
Ccpg1
4930505A04Rik
Prkar1b
Dnaaf5
Ift57
Stxbp4
Cox11
Cfap36
Ttc41
Hsp90b1
Maats1
Cox17
Zdhhc1
Qtrt2
Ccdc191
Zfp667
Trit1
Tmem219
Lrrfip1
Morn2
Dhx57
Fscn2
Lrrc49
Srsf7
Lrrc23
Dynlt1b
Nup50
U2af2
Ccdc106
Mycbp
Mfsd4b4
Rpl35a
Iqcg
Spout1
Mrpl10
Lrrc46
Lrguk
Kcnip3
Brms1
B4gat1
Wdr27
1600012H06Rik
Timm10
Smtnl1
Lrrc6
Pak1ip1
Mpc2
Dcaf6
Sdccag8
Cep170
Meig1
Dclre1c
Sf3a1
Ccdc157
Wdr31
Gtf2f1
Ing1
Cars2
Zswim2
Trip4
Csnk1g1
Ywhaq
Gpr19
Rpf2
Lrrc73
Psap
Fam151b
2410004P03Rik
Rpgrip1l
Fto
P4ha1
Per1
Psmc3ip
Gde1
Dnah9
Ankef1
Sun3
Gm11992
Rhpn1
Eif4a3
Fbf1
Pold2
Cetn4
Bbs12
Tdrp
Gtf3c1
D430042O09Rik
Morn3
Pakap
Rnf40
Ccdc189
Ssc5d
Nat14
Irak1bp1
Ap3m2
Lrriq4
Lrrc34
Dynll1
Tsga10
Ap2a1
Agtrap
Rem2
Sik3
Pafah1b2
Cenph
Slc39a13
Ccdc180
Mafa
Rnf141
Adgb
Ptdss2
Igsf9
Shq1
Wdr7
Togaram1
Klhl28
Dym
Aqp4
Synj2
Pbx4
Dgkg
Setd4
Cbr1
Ankrd13d
Txndc17
4933427D14Rik
Plin5
Lrg1
Cbx5
Ttc26
Stx8
Cfap52
Churc1
Pick1
1700010I14Rik
Samd4b
Gmfg
Myo10
Nsmce1
Lyrm4
Fars2
Sgsm1
Wfdc3
Dnttip1
Hdhd3
Rpn1
Cyth2
Pold3
Glipr1l3
Caps2
Fam98b
Kpna1
Odf2
Ubxn2b
Marchf9
Cdk4
Fam183b
Mocs3
Dpm1
Spef1l
Mapre2
Nucb2
Tpm3
Ankfy1
Kdm4a
Pef1
Parp4
Cenpj
Spats1
Fam47e
Ccdc113
Fzd3
Fbxo16
Gsg1
Ralgapa1
Ywhae
Gdf11
Dlec1
Kdm6b
Spsb2
Psmd8
Acap2
Rrp12
Kmt5c
Hspa12a
Eno4
Ap3d1
Pcgf1
Gmnc
Hsdl1
Dnaaf1
Spag1
Rsph4a
Snrpd2
Qpctl
Dixdc1
Ovca2
Hic1
Tubgcp3
Cmtr2
Pcsk1n
Ccno
Mlec
Rnf5
Agpat1
Gcc2
Efhc1
Sirt3
Psmd13
Efcab12
Stk11ip
Hsph1
Znhit1
Plod3
Arid4a
Mfrp
C1qtnf5
Nek11
Aste1
Arrdc3
Lman2l
Phc2
Wdr78
Mier1
Capn10
Cluap1
1700037C18Rik
Mlf1
Mns1
Rps6kc1
Glipr1l1
Psma5
Plekhb1
Cfap97d2
Leng8
Mov10l1
Mlc1
Sfi1
Ccdc184
Asb8
Cfap43
Taok2
Dnah2
Sertad1
Trub2
Ift27
Mapk10
Catip
Dhx40
Tbc1d32
Dusp3
Cfap97d1
Marchf8
Eef1akmt2
Abraxas2
Ralgds
Bbs9
Cfap161
Ttll9
Rsph14
Rab36
Cfap20dc
Bbs4
Map6
Cdkl1
Spata7
Pik3r2
Sf3b5
Sertad3
Tasp1
Tbcel
Ip6k2
Gm12500
Ampd2
Sytl3
Dynlt1f
Dynlt1c
Cipc
Nr1d1
Slc25a14
Derl1
Ptpn13
Zc2hc1c
Acyp1
Sec61a2
Tmem218
Tfip11
Fos
AI429214
Tmem89
Nanos2
Mypop
Armc3
Pi4k2a
Morn4
Spice1
D3Ertd751e
Fam227a
Cby1
Ndufs5
Rab28
Sdcbp
Rabl2
Tomm7
Wdr35
Trip12
Fbxo36
Cfap69
Clip4
Msi1
Mzf1
Slc4a8
A930007A09Rik
E2f8
Mapk15
Atp23
1700001O22Rik
Mrpl58
Myg1
Intu
Fndc11
Cwf19l2
Ube2o
Stpg1
Nipal3
Aspm
Foxo6
Med31
4930563E22Rik
Slc25a46
Elmod2
Slc22a12
Hspbp1
Pomt2
Gstz1
Klhdc10
Itpkc
Coq8b
Acox3
Ubxn10
Pla2g2c
Rpp38
Acbd7
Galk2
Cops2
Wdr17
Crnkl1
Cfap61
Fank1
Dhx32
Spef1
Ppp2r3a
Zfp688
Gpn3
Fam216a
Spata17
Gpatch2
Ppm1e
Ddx24
Epb41l4a
Saraf
Ttll13
Drc1
Ehd1
Map7
Dnajc24
Iqsec1
Sik1
Fzr1
Brd3os
Cd24a
Sybu
Qars
Chd4
Fsip1
Gpsm3
Mxi1
Poll
Dpcd
Cfap221
Prkn
Pacrg
Fscn1
Txn1
Aopep
Mtmr6
Nbr1
Brca1
Mrpl22
Gemin5
Dnaja1
Iqcc
Dcdc2b
Ccdc28b
Faap24
Ccdc138
Ccnc
Wdr54
1700003E16Rik
Sgta
Igsf11
Ttc27
Fam185a
Ccdc146
D230025D16Rik
Usp29
Peg3
Pex12
Ap2b1
Tmem95
Kctd11
Gtf2e2
Ubxn11
Marchf10
Efcab2
Cfap46
Ccar2
Slc27a1
Nxnl1
Peli1
Etv1
Dbn1
1700037H04Rik
Rhobtb2
Ccdc107
Ipo4
Fig4
Ak9
Azin2
Ddx41
Nsdhl
Cetn2
Cfap73
Rfc5
Rsrc2
Kntc1
Coq3
Spag6l
Tspyl4
Lca5
Tm4sf1
Nme5
Glis3
Ttc25
Pisd
Mief2
Flii
Arfip1
Nfkbil1
Ddx39b
Atp6v1g2
Spg21
Tmem237
Klf2
Cep128
Wdr13
Patl1
Elmod1
Dtna
Zfp24
Ankrd54
Meak7
Map3k14
Cog7
Ttll1
Smc6
Gen1
Tmem107
Esrra
Catsperz
Lekr1
Iqce
Brat1
Zfp719
Thbs3
Mtx1
Mrps9
Tmem17
Dcaf12
Evi5l
Cep41
Qtrt1
Rpl35
Arpc5l
Ube2b
Cdkl3
Arf3
Tex9
Ap1m1
Shoc2
Bbip1
Asb1
Tagln2
Slc25a3
H1f10
Nek4
Spata2
Rnf114
Mrpl39
Bub1
Yeats2
Daw1
Tor3a
Ptms
Tmtc3
Cep290
Nemp1
Shank3
Gnl2
Neurl4
2810408A11Rik
Wdfy1
Map3k12
Oasl1
Smpd3
Spata18
Sgcb
Casp6
Spata24
Gemin8
Actc1
Igbp1
Med9
Dagla
Fam161a
Zfp523
Prr7
Tmem231
Rdh5
Bloc1s1
Ndufaf3
Dalrd3
Slf1
2210408I21Rik
Efcab6
Actr6
Btrc
Prr3
Gnl1
Syna
Clip2
Dnal4
Ankfn1
Pcnx4
Ndufa8
Morn5
Edem3
Pltp
Nox4
Casd1
Ttc30b
Ndrg4
Lmna
Nme9
Abl1
Wdr93
Pex11a
Rap2a
Ccdc126
Klhdc8b
Ccdc71
Cfap410
Dnah11
Usf1
Tgfbrap1
AI597479
Taf1a
Ppp1r16a
Foxh1
Zbtb22
Tapbp
Ankrd6
Prkar1a
Lst1
Tmem216
Bbs7
Nudc
Ift172
Fndc4
Stk35
Zmat2
Katnal1
Klhl21
Ift81
Pde4a
Galnt16
Zfp407
Ttc21a
Gorasp1
0610010F05Rik
Rapgef3
Notch1
Ssbp4
Ppm1g
Lmtk3
Tufm
Lrif1
Ccdc162
AU041133
Cars
Zfp386
Pin4
Mas1
Fkbpl
Atf6b
Ccdc158
Traf3ip1
Xylb
Sec16a
Tuba1a
Mxd3
Ppp2r5d
Zmynd10
Rassf1
Nprl2
Sec23b
Rbbp9
Cyb561d2
Cpeb1
Mul1
Dnajc27
Lrrc51
Ccdc187
Ccnb2
Ttyh1
Pibf1
Dis3
Crip1
Tedc1
Dhx16
Rtl6
1810020O05Rik
Kif23
Sorbs2
Daam1
Hspa1l
Hspa1a
Camk2a
Rbfox2
Pspc1
Dsel
Dctn3
Kif14
Mex3c
Hspa2
Rab31
Ccdc121
Otud5
Nqo1
Knop1
Iqck
Mtmr14
Fam161b
Coq6
Rhbdd2
Mafg
Pcf11
Zfp446
Ino80e
Hirip3
Afg1l
Ptpn4
Ccdc170
Lbhd2
Cnpy3
Nfatc1
Dpy19l2
Wdtc1
Zfp512
Sufu
Actr1a
Mtf1
Erich6
Ppil4
Ttc34
Cep164
Itgb3bp
Efcab7
Calm2
Fam187a
Eftud2
Ccdc103
Ppp1r32
Dnah7a
Nudt2
Kif24
Cd82
Cnot10
Sptbn4
Amer3
Nacad
Ccdc102a
Junb
Irx5
Pkp4
Ccdc148
Ppp4r2
Dynlrb2
Stx18
Tom1l2
Drc3
Prr18
Rrp7a
Tob1
Map3k19
Vwa3b
Pard6b
Paqr7
Tbc1d19
Pacsin2
Aatk
Asmt
Get1
Slc25a25
Noct
Sec22c
1700016K19Rik
Shisal1
Zbed5
Lix1
Tekt1
Actr1b
4933424G06Rik
Glb1l2
Wfdc1
Pgap3
Atf6
Trp53rka
Dennd2a
Arf2
Cfap157
Ctxn1
Ddo
Zic5
Tspyl5
Adgra1
Safb2
Safb
1700028P14Rik
Hat1
Ano3
Dffb