ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX027337 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◣ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Pofut2
Ube2o
Tex44
Sik3
Pafah1b2
Rfx1
Zdhhc1
Jund
Iqcn
Yif1a
Tmem151a
Cnih2
Fam227b
Dtwd1
Azin2
2900026A02Rik
Tmem211
Dpy19l1
Ncoa5
Mks1
1700030J22Rik
Zmynd12
Ppcs
Ccdc30
Traf3ip1
Xrcc1
Pinlyp
Mthfr
Clcn6
Wdr34
Wfdc3
Dnttip1
Mycbp
Dynll1
Sik1
Yipf3
Polr1c
Lrrc73
Fos
Acap2
Foxj1
Tsga10
Lipt1
3110082I17Rik
Abi2
Smpd2
Ppil6
Bbc3
Anks3
4930451G09Rik
Ssbp2
Sde2
Wdfy1
Cfap298
Pigx
Cep19
Socs3
Fosb
Chd4
Pkig
Rrh
Gar1
Cfi
Hsdl1
Dnaaf1
Ppp1r16a
Foxh1
Ankrd13d
Map6
Ssbp4
Isyna1
Dyrk1b
Fbl
E4f1
Map1a
Cenpf
Wdr90
Mcrip2
Mafa
Adgrg1
Prkar1b
Dnaaf5
Zcchc3
Sox12
6820408C15Rik
Sirt7
Pycr1
Mafg
Jam3
Srek1
Dnajc25
H1f10
Dyrk3
Ufsp2
1700029J07Rik
Meig1
Dclre1c
Ovca2
Hic1
Rundc1
Ptges3l
Aarsd1
Klf2
Saxo2
Efl1
Zfp36l2
Sdcbp
Snapc2
Ctxn1
Zc3h3
Dffb
Cep104
Rabl2
Pold3
Fam214a
Cetn4
Bbs12
Dyrk1a
Arrdc3
Agtrap
Rhbdd2
Dagla
Ccdc57
Wdr78
Mier1
Fank1
Dhx32
Fam131a
Oxnad1
Dph3
Kdelr3
Kcnj4
Pak4
Nudt2
Kif24
Eif2b2
Nup50
Cyp46a1
Naa40
Samd4b
Gmfg
Tnpo1
Ing1
Cars2
Phf20
Sfi1
Eif4enif1
Zfp839
Mok
Marchf8
Zfp523
Dner
Stk32c
Lrrc27
Id2
Stk40
Lsm10
Tecpr2
Cinp
Arl4a
Elmod2
Ttc21a
Gorasp1
Rtca
Dbt
Pnma1
Rap2a
Mcidas
Ccno
Tmx4
Iqce
Brat1
Tctex1d2
Cdc37
Ropn1l
Npcd
Cbx6
Ccar2
9930012K11Rik
Leng8
Tmem237
Msmo1
Wdr27
1600012H06Rik
Ift57
Nek11
Aste1
Sec61a2
Ywhaz
Fasn
Ccdc74a
Ptdss2
E2f8
Dixdc1
Zfp24
Tmem107
Mark3
Ift22
Ccdc34
Ccdc181
Mettl15
Kif18a
Mpc2
Dcaf6
Ankfy1
Gnaz
Stx2
Lrrc10b
Hmgn2
Armc9
Wdr60
Sf3a1
Ccdc157
Ehd1
Spcs1
Glt8d1
Per1
Ywhae
Cacfd1
Cep112
Odf2
Thbs3
Mtx1
Pnkd
Mapre3
Ap1m1
Ddt
Cabin1
Lrrc56
Hras
Ubxn6
Hdgfl2
Ankrd54
Ogfod2
Arl6ip4
Mast3
Tlx2
Pcgf1
Lbx2
Pkd1
Klf10
Dnajc1
Odc1
Mindy4
Taok2
Cnpy3
Nsmce1
Katnal1
2310030G06Rik
Lmna
Dhx16
Tada2b
Ccdc96
Rab11fip2
Dennd2a
Rfc5
Trit1
Otub1
Cars
Bub1
9530077C05Rik
Rnf141
Gtf3c1
D430042O09Rik
Adgra1
Crnkl1
Cfap61
Mapre2
Zfp688
Tlcd3b
Aldoa
Ubxn2b
Cfap20
Pyroxd1
D5Ertd579e
Intu
Tarbp2
Map3k12
Rgl1
Arpc5
Ywhaq
Tbc1d32
Akirin1
Morn2
Dhx57
Tubgcp3
Trip12
Fbxo36
Dmwd
Dmpk
Rer1
Morn1
Afg1l
Ahi1
Adgb
Spata6
Hspa4l
Irak1bp1
Nfatc1
Slamf9
Igsf9
Txndc11
Prr7
Trpm2
Cfap410
Erf
Dcp1b
Tfip11
Gtf2e2
Abhd2
Fbxw7
Txndc17
Med31
4933427D14Rik
4930563E22Rik
Ssx2ip
Pds5b
N4bp2l2
Arl6
Xpr1
Nap1l1
Cdc14a
Golgb1
Eaf2
Tppp3
Vps13a
Ppp5c
Eri3
Dnaja1
Eml1
Zfp653
Igsf11
Klhl7
Tent5c
Fam204a
Wdr6
Ndufaf3
Impdh2
Dalrd3
Kif23
Dnajc16
Casp9
Klf4
Lyrm4
Fars2
Mlec
Ubn2
1700037H04Rik
Nr1d1
Tpm3
Sclt1
D3Ertd751e
Serf1
Bdp1
Csnk1g2
Celf3
Dnah2
Zfyve28
Cfap99
Sh3bgr
Lca5l
Gdpgp1
Cib1
Rrp7a
Spata24
Prob1
Knop1
Iqck
Capn10
Lins1
Spice1
Mdk
Chrm4
Ift81
Zfp775
Repin1
Gm5111
Fam222a
Rpgrip1l
Fto
Skiv2l
Nelfe
Dnal1
Ttll13
Hat1
Tmem91
Tgfb1
B9d2
Ubxn11
Cd52
Kiz
Brd3os
Rpn1
Cdca4
Iqch
Aagab
Ccdc102a
Adgrg5
Tsr1
Sgsm2
Ccdc184
Asb8
Gnl2
Med9
Bbs5
Cfap74
Tmem209
Ssmem1
Stk11ip
Shq1
Nek2
Snx13
Spata7
Stxbp4
Cox11
Tent4a
Chchd6
Hspa12a
Eno4
Tm9sf1
Ipo4
Cep162
Lmbrd1
Trappc9
Stox1
Gcc2
Ap1s1
Plxnb2
Dstn
Dhx30
Rfx2
Eif2s1
Atp6v1d
Trmt44
Acox3
Cherp
Nr2f2
Tsnaxip1
Ranbp10
Hsph1
Msi1
Tspan3
Slc25a3
Ss18l2
Sec22c
Cln6
Eif4a3
Card14
Sfxn2
Arl3
Casp6
Trim37
Mrps9
Spata33
Chmp1a
Trim39
Ccpg1os
Ccpg1
Sirt3
Psmd13
Zfp664
Ccdc92
Cfl1
Ttll5
Erg28
Akap11
Syngap1
Cuta
Negr1
Tmem53
Armh1
Stk35
Muc1
Phc1
Cplane2
Arf3
Tspan31
Marchf9
Cdk4
Tmtc3
Cep290
Sys1
Nucb2
Ankef1
Oxld1
Hgs
Ccdc137
Arl16
Dmxl2
Mpc1
Tsen2
Pomt2
Gstz1
Efhc1
Ap3m2
Sun3
Gm11992
Rnf139
Cnot10
Spag6
Galnt2
Cfap69
Foxn2
Eif5
Orai2
Ralgapa1
Rpl30
Erich5
Nbas
Ppm1g
Nek4
Itih1
Nphp1
Mtln
2610524H06Rik
Trim36
Nbr1
Brca1
Gata2
Wdr66
Nemp1
Kcnn1
Ccdc124
Tmem260
Prkar2b
Cbx5
Poll
Dpcd
Mtmr6
Sppl2b
Lsm7
Ptges2
Lcn2
Gm1673
Spout1
Endog
Tmem231
Gabarapl2
Plec
Cirbp
Rfc1
Rasl10a
Gas2l1
Ip6k2
2610301B20Rik
Rsph1
Nme7
Blzf1
Prkar1a
Ube2b
Cdkl3
Wdr31
Bspry
Tomm7
Cfap43
Metrn
Fbxl16
Ptpn21
Zc3h14
Prr3
Gnl1
Abcf1
Cep43
Arhgap39
Snrpd2
Qpctl
Pold2
Cluap1
1700037C18Rik
P4ha1
Akna
Slf1
2210408I21Rik
Dnajc10
Nr2f6
Fam161a
Togaram1
Klhl28
Josd2
Aspdh
Cacng4
Kif3b
Fam81a
Tedc1
Crip1
Smc6
Gen1
Gmppb
Amigo3
Ppm1e
Ccdc13
Micos10
Tasp1
Smdt1
Pheta2
Naga
Tor3a
Cep135
Hmgcr
Tagap1
Nmb
Neurl4
Acap1
2810408A11Rik
Spg21
Pgam1
Wdr35
Sertad3
Arfip1
Rsph14
Rab36
Trim9
Gpn3
Fam216a
Tbc1d19
Tctn2
Nsdhl
Cetn2
Bbs7
Zswim1
Spata25
Ctsa
Creld2
Alg12
Dok3
Ddx41
Ift88
Otud3
Dnah9
Dag1
Ptpro
Klhl18
Kif9
Chmp4b
Mbd4
Ift122
Ccnc
Safb2
Safb
Clba1
Ahnak2
Ica1l
Prepl
Camkmt
Adgrb2
Prkcsh
Ccdc151
Tmem250-ps
Arl2bp
Dusp18
4921536K21Rik
Pitpna
Naa35
Entpd7
Kif14
Alms1
Cipc
Tex9
Ptpn13
Cog7
Syt5
Hes3
Fsd1l
Lrguk
Rin1
Brms1
B4gat1
Gde1
Ccp110
Ndufaf6
Ndc1
Map9
Cep128
Spaca9
Ak8
Fam90a1b
Apoo
Inpp4a
Gdf1
Cers1
Sipa1l1
Kndc1
Bclaf1
Gatd1
Zfp580
U2af2
Ccdc106
E2f5
Tpi1
Spsb2
Rap1gap
Ngef
Agbl3
Stx18
Prkaa1
Cep126
Trub2
Cfap36
Kif6
Xrra1
Spcs2
Ntm
Sec16a
Cibar1
Ubr7
Gon7
Gm20604
Tmem17
Ttll4
Tctn3
Entpd1
Vps35
Neurl1a
Get1
Tmem216
Ubl3
Pfn2
Lyst
Cox20
Psmc3ip
Mlx
Slc35a1
Dusp6
Osbpl7
Mrpl10
Lrrc46
Eef2kmt
Ptpn1
Pard6a
Enkd1
Acd
4933405L10Rik
Zbtb22
Tapbp
Rgl2
Calm2
Rpl35a
Lmln
Iqcg
Dctn1
Wdr54
1700003E16Rik
Fzr1
Dohh
Hsp90aa1
Usp30
Svop
Ddr1
Lpin2
Dync2li1
Rtl5
B9d1
Ccdc126
Rdh5
Bloc1s1
Ttc39d
Slc39a7
Rxrb
Ring1
H2-Ke6
Dnal4
Fam110a
Stk19
Dxo
Rnf5
Agpat1
Ager
Sec14l1
Chn1
Rlf
Kif3a
Wdr7
Kifbp
Pitpnm1
Cdk2ap2
Fam219a
Dnaic1
Yipf5
Ddx20
Mlf1
Copb2
Fam160a2
Cnga4
Ndufab1
Rpf2
Pgs1
Phc2
Rpgr
Slc25a46
1700113H08Rik
Lrrc25
Cacybp
Fbxl2
Agbl4
Cic
Zscan18
Kifc3
Ip6k1
Mrpl39
Slc4a8
Braf
Opcml
Sdccag8
Cep170
Bola1
Baiap2
Lyrm1
Dcun1d3
Dym
Ifi27
Ddx24
Erich2
Ankrd42
Fstl3
Mgat1
Klhdc10
Fam167a
Rhpn1
Usp20
BC005624
Tulp3
Rhno1
Foxm1
Tusc3
D230025D16Rik
Timm13
Lmnb2
Dnajb2
A630095N17Rik
Cystm1
Qsox2
Nipbl
Hcn4
Cmtr2
Ccdc187
Irx5
Dph6
Pnmal2
Uhrf1
Arrdc5
Oscp1
Mib2
Tmem64
Ap3d1
Zswim2
Mapkbp1
Pik3r2
Timm21
Fbxo15
Itsn1
Cryzl1
Mrpl58
Pick1
Rab28
Usp2
Ttll1
Usp29
Peg3
Trdmt1
Clcn4
Pltp
Pcyt1a
4930453N24Rik
Znhit2
Tm7sf2
Mrpl49
Fau
Ndufaf4
Prmt5
Kcnk4
Gpr137
Bad
Axdnd1
Ppan
Angptl6
Shfl
Syt17
Rp9
Bbs9
Srms
Fndc11
Ttc25
Eif4g3
Tgfbrap1
AI597479
Traf3
Slc25a14
Bbs2
Meak7
Junb
Hook2
Edem3
Prdm4
Trim24
Ube4b
Ebna1bp2
Cfap57
Tmem167b
Taf13
Btbd9
Rlbp1
Fanci
Aopep
Sema4b
Sypl
Ttc13
Arv1
Rara
Spata2
Rnf114
Zpr1
Bud13
Mex3c
Ncs1
Rasal2
Ska1
Cxxc1
Tnfrsf19
Nabp2
Dnah10
Ercc6l2
Unc119b
Cpd
Tubb4b
Slc34a3
Fam166a
Gm5741
Fbxw9
Nt5m
Cops3
Derl1
Gm525
Cmss1
Arid4a
Dhx37
Bri3bp
Scamp1
Wdr19
Dynlt1b
Zbtb48
Pgap3
Lztr1
Aifm3
Tmem43
Chchd4
Lfng
Dbn1
Pemt
Bbs1
Polr2f
1700088E04Rik
Sctr
Cfap221
Pak1ip1
Prr14
Fbrs
Cfap299
Slc35a2
Pim2
Id1
Fbxl14
Etfbkmt
Cfap58
Pm20d2
Fth1
Ptpn4
Vwa3b
Rnf182
Crem
Papola
Wrap53
Trp53
Lpcat4
Wfdc1
H13
Gemin8
Mocs3
Dpm1
Lrriq3
Fpgt
Usp6nl
Gtf2f1
Wars2
Phtf1
Poc1b
Galnt4
Camk2a
1500009L16Rik
Gfpt2
Zfp287
Oaz2
Prrt1
Ppt2
Gmfb
Cgrrf1
Plch1
Fgr
Ndufs5
Lmtk3
Adsl