ChIP-Atlas: Target genes

Potential target genes for Gli3

Query protein: Gli3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX23462398 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Gli3's Target genes

◢ Gli3: Average

◢ SRX20599249: Cortex

◢ SRX23462396: Embryonic brains

◢ SRX23462397: Embryonic brains

◣ SRX23462398: Embryonic brains

◢ SRX386266: Embryonic limb

◢ Gli3: STRING

Cldn34d
Txndc11
Tnfrsf9
Park7
E030030I06Rik
Dynll1
Rbm25
Thrap3
Septin2
Hdlbp
Kmt2a
Proca1
Rpl23a
Rab34
Nsun6
Arl5b
Ttc32
Tmem125
Wbp1l
Efcab2
Slc39a7
Rxrb
Ring1
H2-Ke6
Ptch1
Slc35f5
Washc2
Ggct
Nlgn2
Plscr3
Tmem256
Arl6
Apoa2
Tomm40l
Nr1i3
Enc1
Stxbp5l
Twf2
Ppm1m
Meaf6
Psmd11
Sorl1
Fbxw4
Tgfbr3l
Map2k7
Ptch2
Ensa
Actr3b
Zfyve21
Xrcc3
Nrcam
Kif1a
Nsd1
Slc25a53
Arhgap44
Anks3
4930451G09Rik
Fbxo30
Ephb3
Ccdc30
Zmynd12
Ppcs
Shc1
Pygo2
Pbxip1
Zmynd8
Irs2
Nkiras2
Dnajc7
Tmem18
Slc5a5
Rpl18a
Senp8
Myo9a
Rps10
Speer4e
Usp45
Tstd3
Smim38
Cplx2
Cacng2
Prob1
Spata24
Lrrc7
Hdgf
Tmem239
1700020A23Rik
Fnbp4
Fancc
Rab5b
Pmel
Cdk2
Hpca
Cetn3
Cenpu
Fkrp
Strn4
Rassf7
Lmntd2
Phrf1
Litaf
Eif4a1
Cd68
Lyl1
Cyth1
Akirin1
Celsr1
Cry2
Mat2a
Patz1
Lpar1
Jag1
Marchf2
Rps29
Lrr1
Gipc1
Ptger1
Mcl1
Teddm1a
Glul
Oip5
Nusap1
Gnb1l
Lrp8
Gnai2
Pds5b
N4bp2l2
Gpd1l
Sox2
Gtf2a1
Csmd1
Muc3
Mycn
Nemf
Actn1
Siah3
Wdr6
Dalrd3
Ripk2
App
Rusc1
Supt6
Sdf2
Ezh1
Tmem64
Gm11541
Ddx55
Rab33b
Has2
Smpd3
Trrap
Tmem130
Ogfr
Col9a3
Selenot
Mrgbp
Entpd6
Tmem158
Nnt
Phactr4
Luc7l
Fam234a
Cdc20b
Pofut2
Togaram1
Klhl28
Zfp707
Blmh
Pdap1
Bud31
Akr1a1
Dux
Gm4981
Gtf2ird1
Bcl2l1
Ccdc187
Nr1d2
Cmpk2
Elp6
Slc43a2
Sec62
Fam161a
Fdxacb1
1110032A03Rik
Ncald
Gli1
Dlg4
Acadvl
Cdk9
Ppan
Shfl
Angptl6
Usp35
Kctd21
Tpd52l1
Tbc1d24
Ntn3
Zfp704
Nubp1
Snapc3
Zscan12
Znrf1
Snrpg
Fam136a
Hgsnat
Ubtf
Coro2b
Pnkp
Ptov1
Mynn
Actrt3
Limk2
Trim47
Sdf2l1
2610318N02Rik
Map2k6
Amz2
Pipox
Speer4d
Igf1r
Akap13
Gm51573
Gm525
Gm11213
Olfr401
Rusf1
Kiz
Psmd5
Slc2a2
Sfi1
Eif4enif1
Nkap
Gdf3
Cyp2a5
Evx1
Cntrl
Denr
Spock1
Fam214b
Rps6kc1
Ptgr2
Gp9
Tmsb10
Tnfaip6
Kbtbd8
Sprr4
Sprr1a
A930018P22Rik
Zfp629
Eef2
Dapk3
Tulp1
Pcdhb8
Rgs20
Ercc4
Cd163l1
Cldn34-ps
Vstm5
Tmprss5
Fbxo10
Mras
Dcdc2a
BC053393
Nprl3
Hba-x
Hba-a2
Hba-a1
Mto1
Cgas
Gpsm1
Nkx2-6
Sh3bgr
Podnl1
Zfp386
Ifnl3
Kdm4a
Rbbp8
1600014C10Rik
Dnah12
Taar8b
Cd209a
Olfr784
Greb1
Sgsm3
Rnf220
Obox3
Vmn1r66
Cpt1a
Klf10
Mup2
Mup15
Wipf1
Dnah6
Atoh7
3110040M04Rik
Olfr270
Mepe
Brd7
Lcmt2
Adal
Popdc3
Marveld2
Cfh
Zfp957
Abca3
Abca17
Scap
Grxcr2
Hes6
A930009A15Rik
H2aj
H1f7
Kcnn4
Gm7579
Atxn1l
Klhl23
Npas2
Optn
Cox6a2
Tsn
Nifk
Tuba3a
Sntb1
Arhgap31
Taf1b
Gm9789
Prpf39
Ctss
Peli3
Cdk13
Tcl1b5
Tcl1b3
Rfx4
Zfp420
Spint5
Spint4
Tex33
Oas2
Sp140
Sp110
Pcolce
Fbxo24
Ttll1
Gramd1b
Cfap20
Mnd1
Apoh
Tmem229b
Clec2e
Epm2a
Cyp2a4
Snrpn
Car5b
Slc45a1
Pde3b
Cyfip2
Htra2
Aup1
Kbtbd6
Fcgr3
Mup17
Gm7954
Slc10a6
Lca5l
H2-Ab1
Rab11fip4
Tnk2
Matn3
B4galt5
Taar2
Ncdn
Ctsb
AU040320
Usp10
Snorc
Cyp4a32
Psen2
Cfap97d2
Parva
Cstdc6
Mettl8
Dcaf17
Slc25a2
Smok3b
Smok3a
Krtap9-1
Gm11568
Gm11559
Zfp872
Nsmf
Lmntd1
Stk32c
Gabbr2
Vps37d
Mlxipl
Gm14459
Zbed5
Nupr1l
Anxa6
Ptcd1
Cpsf4
Nedd9
Olfr368
Upk3bl
Upk3b
Naip2
Gm3409
Dpys
Cops7a
Chrac1
Abhd6
Ttll4
Serpinb5
Krtap9-3
Gm11938
Gm11937
Sgsm1
Tbk1
Odf2l
Guca2b
Scgb2b21
Npdc1
Olfr1423
Krtap4-7
Gm11563
Lcn9
Glt6d1
Ces2h
Trak1
Lrrc10
Ext2
Grid2ip
Defa34
Dlg2
Tnk1
Wdr92
Pno1
Olfr1055
Sirpa
Smarca5
Slc11a2
Herc3
Gm7356
Entpd2
Cdcp3
Olfr631
Dhodh
Smim34
Procr
Ccr6
Wnt5b
Lce3c
Fbxl14
Chchd2
Tm9sf4
Ntan1
Il1f9
Top1
Olfr1193
Lce1b
Lce1a1
Olfr1008
Frzb
Lss
A930007A09Rik
Mroh2a
Copg1
Serpinb1c
Klk1b16
Intu
Dctn4
Slc22a22
Hhex
Gm45618
Lce1m
Crct1
R3hdm2
Lrrn2
Lrrc8b
Dnmbp
Rab39b
Olfr362
Gm8126
Enpep
Nabp2
Smok3c
Mon2
Taar7a
Taar6
Enpp2
Ctsk
Slc39a12
Gm11567
Sectm1b
Sectm1a
Prss35
Zfp69
Vav3
Mboat1
Alppl2
Lce3f
Mrpl11
Nudt2
Krtap5-5
Kif24
Asb2
Plac8
Pcdha8
Mbd5
Fgf14
Gm4553
Gm1979
1700013F07Rik
Oxt
Mrps26
Ercc1
Sel1l
Ffar4
Reg2
Myoc
Zfp28
Tmx2
Olfr323
Med19
Cartpt
Capn15
Inpp5f
Clec4b1
Spin2-ps1
Olfr194
Impa2
Gm21637
Rgs9
Gm51598
Adck2
Pglyrp2
Olfr924
Slc26a9
Inafm1
Ginm1
Chd9
C5ar1
Apol10b
Adamts17
Itga6
Zswim8
Gm13057
Gm13040
Chchd1
Ramp3
Slc13a5
Gm8138
Gm6713
Galp
Ikzf5
Acadsb
Khdc3
Olfr497
Camk1d
Hlf
Crisp2
a
Krtap4-13
Gm11596
Gm11569
Gm11554
Olfr470
Elfn1
Izumo2
Gm14595
Gm14590
Ccdc110
1700016D06Rik
9530003J23Rik
Coa6
Rbpjl
Matn4
Lrig1
Septin9
Gm7762
Acp7
Pramel42
Gm45337
Gm39115
Clec4a1
Sirt3
Psmd13
Il23a
Bin2
Toporsl
Ndufa6
Olfr342
Mylk2
Mest
Nlrc3
Mrgprx2
Eid2
Mup19
Nlrp1b
Il17re
Insl5
Dynlt1b
4930444P10Rik
Olfr761
Tbc1d22a
Shroom4
Timm9
2700049A03Rik
Zfp970
Ube2j2
Scn10a
Dcpp2
Car8
Kcnh8
Lpin3
Sox6
Elapor1
Zdhhc2
Ubqln5
Cspg4b
Akr1b10
Ruvbl2
Gys1
Sult1b1
Glrp1
Cdc42ep1
Gm14440
Gm14288
2900026A02Rik
Rhox9
Samt1d
Samt1b
Samt1
Sstr2
Magee2
Kcnk3
Scgb2b3
Scgb1b3
Amy2a5
Amy2a4
Amy2a3
Amy2a2
4930486L24Rik
Tmem267
Plscr4
Zscan4b
Zfp607b
Tcirg1
Ndufs8
Eif2b2
Xlr3c
Tmem94
Sh3tc1
Kif3c
Hmox2
Gmeb1
Scml1
Pink1
Olfr1095
Olfm1
Krtap4-6
Asz1
Gm36176
Gm3285
Gm10318
Lce3e
Krtap4-16
Ipo9
Sprr2a2
Sprr2a1
2610301B20Rik
4930596D02Rik
Wnt3a
Sh3bp5
Lce1d
Lce1c
Lce1a2
Fam110b
Dhx40
Fam162b
Gpr35
Slc23a3
Rai2
Ptpn14
Nhej1
Krt27
H2-Q10
Slc25a48
Fmo4
Ctdsp1
Bcam
Samt1c
Rsl24d1
Cxxc5
Rpp25
Olfr1123
Mgst1
Gzf1
Efs
Cox5a
F2rl3
Gm4869
5430401F13Rik
Gnb4
Ankrd13d
Olfr1496
Olfr1495
Scgb1c1
Odf3
Gh
Coro2a
Txndc8
Sec24d
Krt34
Krt31
Ctcfl
Cndp2
Abt1
Olfr31
Olfr564
Trim6
Gm19428
Rtp1
Ms4a12
H2-Q9
H2-Q7
Arid1b
Gm15091
Ndst2
Csnk2a1
Vmn1r30
Gm21319
Olfr54
Krt85
Krt6a
Alox12
Wdr88
Nt5c
Krtap4-1
Krtap2-4
Gm11562
Fam149b
Ecd
Defb7
Smarcd1
Gpd1
Gm3250
Abcd2
Olfr461
Lgals6
Lgals4
Il23r
Svs4
Svs3a
Sparcl1
Klhdc4
Cmah
Vps11
Tnn
Nlk
Hyou1
Ceacam16
Olfr38
Akain1
H60b
Wasl
Tmco4
Rnf186
Gm4559
Dynlt1a
Krtap1-5
Krtap1-4
Krtap1-3
Sympk
Pate7
Olfr1344
Foxa3
Etfdh
4930579G24Rik
Zfp174
Numbl
Rpl3l
Nphp1
Ndufb10
Mtln
Msrb1
Extl1
Coq7
Zfp771
Dmrtc1c2
Dmrtc1c1
Oog1
Krtap5-3
Hsbp1
Cfap100
Tmem219
Sumo2
Spz1
Polr3h
Lgmn
Krtap3-3
Krtap3-2
Krtap3-1
Gpr34
Gm11564
Gabrb2
Epb42
Csdc2
Alox12e
Abcf1
Dlk1
Sptbn4
Pabpc1l
Khk
Emilin1
Spg20
Gm7714
Abcc12
Tspyl2
Rpl36
Micos13
Lyplal1
Krt40
Gm3238
Pkn1
Ier3ip1
Hjv
Zfp446
Zfp324
Olfr340
Vmn1r23
Spg7
Rhox3e
Rhox2e
Gask1a
Fam170a
Ankdd1b
Wfdc5
Wfdc12
Uaca
Stard9
Pik3ap1
Pcdhb14
Pcdhb13
Pcdhb12
Lime1
Lce3b
Lce3a
Lamtor4
Krt76
Golim4
Gm5795
Gm3012
Gm10413
Fam120b
Dll1
Catspere1
Adgrl1
Rara
LOC102633783
Krtap5-4
Krtap5-1
Ddit3
C130026I21Rik
Usp6nl
Synj2
Scn8a
Obscn
Dffb
Cep104
Zfp991
Zfp978
Fig4
Ak9
Ppa2
Olfr773
Krtap31-1
Gm11565
Ccdc172
Ass1
Rbm15b
Ptprr
Manf
Ces1g
Bola3
Tmem88b
Selenoi
Kifap3
Iqcf6
Cflar
Ankrd65
Zcchc9
Ip6k1
Inka1
Cdhr4
Sars2
Pramel16
Mrps12
Gm44805
Clptm1
Chkb
Ccer2
Apoc4
Apoc2
Topaz1
Ppp1r13l
Kmt5a
Kctd3
Cd3eap
Bckdhb
Pim1
Ube2t
Tbc1d9b
Stpg1
Rwdd2b
Rpl27
Ppp1r12b
Piwil4
Phc3
Nipal3
Map3k9
Lce1g
Krtap10-4
Krtap10-10
Gpihbp1
Gjd4
Fut4
Dnah14
Col6a4
Arhgef10l
Tmem181a
Tm4sf20
Dnmt3l
Cd4
Ccl24
Aire
Tmsb4x
Olfr1355
Lrrc47
Lce1f
Lce1e
Enpp4
Rcan2
Gm10354
Chit1
Kcnk18
Gm17455
Zfyve26
Wsb1
Tmem198b
Rbmx2
Rad51b
Psg26
Lcorl
Lce1i
Gbp8
Dnajc14
Bcl9l
BC048671
Hamp2
Gm8165
Pcdhgb1
Pcdhga4
Pcdhga3
Pcdhga2
Pcdhb20
Pcdhb19
Pcdhb18
Olfr170
Krtap4-2
Gm14322
Faap100
Pstk
Olfr777
Triobp
Btbd35f26
Btbd35f18
Btbd35f11
Btbd35f10
Vps18
Olfr124
Mroh5
Gm9639
Gm6569
Eml1
Spin2d
Eif4a3l1
Arhgap11a
Yod1
Vps4a
Tgtp2
Tgtp1
Syn3
Smco2
Slc2a9
Pfkfb2
Olfml3
Lce3d
Cyp46a1
Cftr