ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671902 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◣ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Pin1
Tmx4
Orai3
Sema4b
Dnajc16
Mapre3
Xrcc1
Pinlyp
Trim2
Cfap298
Lrrc56
Hras
Dad1
Abhd4
Dusp18
4921536K21Rik
Mks1
1700094D03Rik
Fam227b
Dtwd1
Tctex1d2
Mink1
Ccdc30
Cfap65
Klhl18
Kif9
1110051M20Rik
Tctn2
Rlf
Thnsl1
Enkur
Wdr90
Rsph1
Pofut2
Ebna1bp2
Cfap57
Cfap20
Map9
Ttll3
Tmem9
Mib2
Cdk2ap2
Spef2
Katnal2
Kifbp
Fam204a
Pifo
Lsm10
Ccdc39
3110082I17Rik
Rundc1
Ptges3l
Eaf2
Tecpr2
Cinp
Syt5
Mthfr
Clcn6
E4f1
Stoml2
Foxj1
Ttll10
1700030J22Rik
Hydin
Lins1
Usp30
Fam131a
Tmem138
Cyb561a3
Jam3
Ssbp2
Mok
Iqca
Ccdc13
B9d1
Cfap54
Efcab1
Zc3h3
Ppp2r1a
Rfx1
Etfrf1
Casc1
Smg7
Ccdc181
Cfl1
Pigx
Cep19
Dnajc10
Crocc2
Kif6
Wdr34
Dync2h1
Dcun1d5
Rtca
Mindy4
Cfap44
Ubn2
Ccdc57
Ak1
Bbs1
Eif2b2
Klhdc9
Saxo2
Efl1
Cep112
Oscp1
Anks3
4930451G09Rik
Prdm4
Micos10
Ift22
Tekt4
Agbl3
Fez1
Cplane2
Ubxn6
Cabin1
Prepl
Camkmt
Map1a
Prkcsh
Ccdc151
Pnma1
Jund
Gar1
Ap1s1
Tmem167b
Etfbkmt
Ufsp2
1700029J07Rik
Nme7
Blzf1
Chchd3
Josd2
Zswim1
Ropn1l
Fam214a
Oxnad1
Dph3
Prmt5
Cenpf
Bdp1
Tube1
Fam229b
Rer1
Morn1
Mark3
9530077C05Rik
Plch1
Mbd4
Ift122
Lrriq1
Dnaaf3
Kif18a
Nek2
Eif2s1
Atp6v1d
Arl6
Tmem209
Ssmem1
Gm973
Rpl30
Bbs5
Dnajc7
Mast3
Rusf1
Otub1
Fanci
Cfap74
Csnk1g2
Sde2
Itsn1
Cryzl1
Dmwd
Dyrk1a
Stk32c
Lrrc27
Tsnaxip1
Ranbp10
Cyp46a1
Dusp6
Armc9
Kti12
Dcp1b
Sipa1l1
Ncoa5
Fbxw7
Tada2b
Ccdc96
Pak4
Tmem108
B9d2
Dynlt1b
Cep162
Tpgs1
Cdkl4
Hmgcr
Ccdc65
Ccdc34
Alkbh5
Copz1
Cherp
Dync2li1
Ptges2
Dyrk1b
Dnajc1
Dlg4
Ift57
Prkar1b
Dnaaf5
Morn2
Dhx57
Rfx3
Smpd2
Ppil6
Zfp287
Akap11
Maats1
Trit1
Stxbp4
Cox11
Zdhhc1
Ccpg1os
Ccpg1
Naga
Cfap36
Tmem219
Qtrt2
Ccdc191
U2af2
Lrrc49
4930505A04Rik
Lrrc23
Rpl35a
Iqcg
Spout1
Lrguk
Pak1ip1
Nup50
Sf3a1
Ccdc157
Timm10
Ttc41
Hsp90b1
Mpc2
Dcaf6
Kcnip3
Meig1
Brms1
Mrpl10
Lrrc46
Wdr27
1600012H06Rik
Mfsd4b4
Ing1
Gtf2f1
Sdccag8
Cep170
Mycbp
Lrrc6
Wdr31
Ywhaq
Trip4
Csnk1g1
Rpf2
Zswim2
Lrrc73
Psmc3ip
2410004P03Rik
Pold2
Fam151b
P4ha1
Fbf1
Dnah9
Rpgrip1l
Fto
Gde1
Gpr19
Irak1bp1
Sun3
Gm11992
Rhpn1
Tsga10
Lrriq4
Lrrc34
Dynll1
Per1
Gtf3c1
D430042O09Rik
Rnf141
Tdrp
Igsf9
Nat14
Eif4a3
Agtrap
Ankef1
Dym
Sik3
Pafah1b2
Txndc17
Cetn4
Bbs12
Cenph
Ptdss2
Togaram1
Klhl28
Mafa
Wdr7
Ap2a1
Ccdc180
Shq1
Rnf40
Ccdc189
Cbx5
Adgb
Ankrd13d
Stx8
Cfap52
Setd4
Pick1
Myo10
Plin5
Lyrm4
Fars2
Cyth2
Dnttip1
Nsmce1
1700010I14Rik
Pbx4
Rpn1
Churc1
Pold3
Samd4b
Gmfg
Ttc26
Ubxn2b
Fam183b
Cdk4
Fam98b
Mapre2
Odf2
Mocs3
Dpm1
Psmd8
Dlec1
Spats1
Cenpj
Kmt5c
Ccdc113
Spef1l
Glipr1l3
Ankfy1
Ywhae
Nucb2
Pef1
Acap2
Tpm3
Spag1
Hspa12a
Eno4
Fbxo16
Ralgapa1
Pcgf1
Rsph4a
Kdm4a
Fam47e
Rrp12
Slc9a8
Hsph1
Efcab12
Ap3d1
Tubgcp3
Ccno
Rnf5
Pcsk1n
Efhc1
Snrpd2
Qpctl
Hsdl1
Dnaaf1
Gcc2
Cmtr2
Mlec
Arid4a
Cfap97d2
Wdr78
Mier1
Phc2
Lman2l
Sirt3
Psmd13
Capn10
Stk11ip
Ift27
Cluap1
1700037C18Rik
Psma5
Znhit1
Plod3
Leng8
Mlc1
Taok2
Rps6kc1
Nek11
Aste1
Marchf8
Sfi1
Dhx40
Glipr1l1
Cfap161
Cfap43
Tbc1d32
Ccdc184
Mlf1
Dusp3
Cfap20dc
Trub2
Mns1
Bbs9
Mapk10
Catip
Pik3r2
Ptpn13
Cdkl1
Sertad3
Tbcel
Tasp1
Zc2hc1c
Acyp1
Gm12500
Ampd2
Cipc
Ip6k2
Morn4
Spata7
AI429214
Armc3
Slc25a14
Sec61a2
Derl1
Tmem218
Tfip11
Ttll9
Rab36
Rsph14
Mypop
Map6
Sdcbp
Rab28
Tmem89
Trip12
Fbxo36
Spice1
Msi1
Sclt1
D3Ertd751e
Ndufs5
Tomm7
A930007A09Rik
Sf3b5
Fam227a
Cby1
Rabl2
Wdr35
Cfap69
Slc4a8
Zbtb48
Intu
E2f8
Mzf1
Cwf19l2
Mapk15
Mrpl58
Aspm
Ube2o
Pomt2
Gstz1
Acox3
Myg1
Hspbp1
Coq8b
Foxo6
Med31
4930563E22Rik
Crnkl1
Cfap61
Fndc11
Stpg1
Nipal3
Slc25a46
Slc22a12
Elmod2
Drc1
Ppm1e
Galk2
Cops2
Wdr17
Fank1
Dhx32
Spef1
Gpn3
Fam216a
Dnajc24
Map7
Rpp38
Zfp688
Sik1
Poll
Dpcd
Klhdc10
Sybu
Brd3os
Fzr1
Fsip1
Chd4
Epb41l4a
Ehd1
Ttll13
Iqsec1
Ubxn10
Pla2g2c
Spata17
Gpatch2
Qars
Dnaja1
Saraf
Prkn
Pacrg
Cfap221
Ddx24
Nbr1
Brca1
Ccdc138
Igsf11
Sgta
Faap24
Iqcc
Usp29
Peg3
Marchf10
Aopep
Mtmr6
Fam185a
Ccdc146
Efcab2
Ttc27
Mrpl22
Slc27a1
D230025D16Rik
Peli1
1700037H04Rik
Wdr54
1700003E16Rik
Ap2b1
Ipo4
Tmem95
Ubxn11
Ccnc
Spag6l
Azin2
Ccdc107
Glis3
Fig4
Ak9
Gtf2e2
Rfc5
Cfap46
Coq3
Nsdhl
Cetn2
Tspyl4
Cfap73
Tmem237
Ccar2
Kntc1
Lca5
Zfp24
Ddx41
Tm4sf1
Dtna
Arfip1
Nme5
Dixdc1
Ddx39b
Klf2
Spg21
Wdr13
Ttc25
Lekr1
Elmod1
Meak7
Mrps9
Evi5l
Smc6
Gen1
Mief2
Map3k14
Cdkl3
Cep128
Ttll1
Tmem17
Spata2
Rnf114
Zfp719
Rpl35
Yeats2
Arf3
Tex9
Ap1m1
Tmtc3
Cep290
Shank3
Asb1
Dcaf12
H1f10
Cog7
Thbs3
Mtx1
Ankrd54
Gemin8
Nek4
Mrpl39
Smpd3
Spata18
Casp6
Tor3a
Brat1
Tmem107
Shoc2
Bbip1
Daw1
Wdfy1
Slc25a3
Map3k12
Neurl4
2810408A11Rik
Zfp523
Tmem231
Efcab6
Gnl2
Spata24
Med9
Prr7
Bub1
Dalrd3
Ift81
Igbp1
Slf1
2210408I21Rik
Actr6
Dnal4
Ttc30b
Prr3
Gnl1
Wdr93
Pex11a
Ankfn1
Pcnx4
Btrc
Bloc1s1
Edem3
Ndufa8
Morn5
Rap2a
Dagla
Lmna
Prkar1a
Abl1
Pltp
Casd1
Fam161a
Cfap410
Ift172
Ppp1r16a
Nudc
Usf1
Tgfbrap1
AI597479
Zfp407
Dnah11
Ap3m2
Ttc21a
Gorasp1
Tapbp
Lmtk3
Klhl21
Bbs7
Stk35
Katnal1
Tmem216
Ccdc162
Ccdc126
Ccdc158
Pin4
Tufm
Sec23b
Cars
Tuba1a
Zfp386
Ccnb2
Pibf1
Dis3
Tedc1
Sorbs2
1810020O05Rik
Traf3ip1
Fkbpl
Zmynd10
Mul1
Zmat2
Fam161b
Coq6
Kif23
Ppm1g
Lrif1
Dnajc27
Ccdc121
Dhx16
AU041133
Rhbdd2
Sec16a
Pspc1
Dynlt1f
Dynlt1c
Pcf11
Hspa1l
Hspa1a
Xylb
Rbfox2
Afg1l
Dctn3
Dsel
Cnpy3
Mex3c
Rtl6
Knop1
Iqck
Nqo1
Ccdc170
Actr1a
Cep164
Hspa2
Calm2
Camk2a
Ino80e
Hirip3
Lrrc51
Dnah7a
D130043K22Rik
Nudt2
Kif24
Iqce
Eftud2
Ccdc103
Mtmr14
Cd82
Zfp446
Dpy19l2
Ptpn4
Wdtc1
Ppil4
Zfp512
Pkp4
Ccdc148
Mtf1
Erich6
Stx18
Paqr7
Mafg
Cnot10
Otud5
Ppp1r32
Ttc34
Itgb3bp
Efcab7
Tbc1d19
Dynlrb2
Prr18
Atf6
Tom1l2
Drc3
Lix1
Tob1
Actr1b
Rrp7a
Zbed5
Map3k19
Get1
Ccdc102a
Ddo
Safb2
Safb
Pgap3
Sec22c
Lmbrd1
1700016K19Rik
Dffb
Cep104
Pds5b
Rpl24
Tekt1
Zbtb5
Fbxo31
Ano3
Trp53rka
Glb1l2
Dennd2a
Ctxn1
Mgat1
Adgra1
Jun
Vwa3b
Abhd2
Nacad
Cdc14a
Dmtn
1700028P14Rik
Oaz2
Nsmf
Fbxl2
Spop
Rab11b
Zfp819
Denn2b
Mtr
Tspyl5
Arf2
Cfap157
Prkdc
Mcm4
Cfap58
Arl13b
Lca5l
Dcaf15
Akap6
Usp2
Tmem64
Uvrag
Rtl5
Fbxw9
Hat1
Zfyve28
Cfap99
Cfap77
Ruvbl1
Sem1
Naa40
Adam22
Pex11g
Smc1b
Jakmip2
Pnp
Dnajc15
Ulk4
Nap1l1
Rin1
Nfe2l1
Srek1
Ppp5c
Spag8
Wdr60
Cystm1
Ttf1
Tm9sf4
Tmem67
Clasp2
Tbc1d16
Ccdc40
Fam76a
Wbp11
BC049715
Dnaaf2
Myo1e
Kcnj16
Sfxn2
Arl3
Wdr19
Gm867
Lyrm7
Tmed10
Hipk1
Nicn1
Tctn3
Entpd1
Dhx37
Srfbp1
Ift52
Bclaf1
Myadm
Braf
Stk16
Glb1l
Parp8
Trp53rkb
Rpl22l1
Gpr137
Bad
Matk
Etfa
Stk33
Rnf32
Clec3b
Ecrg4
Nmb
Zbtb44
Tnpo1
Fam90a1b
Apoo
1500009L16Rik
Agbl4
Lpin2
Atp1a1
Spns1
Gpkow
Dnajc25
Chchd6
Syt10
Arrdc4
Lcorl
Tcp11
E2f3
Bola1
Cfap70
Copb2
Dstn
Orai2
Fam167a
1700019D03Rik
Spcs1
Glt8d1
Elof1
Kiz
Zfp433
Gm32687
Ift74
Cdc37
Tent5c
Btbd17
Tsen2
Trim39
Wdpcp
Mdh1
Slc25a18
Pou2f1
Rasal2
Mterf4
Tubb4b
Trp53bp1
Pcx
Tnks1bp1
Dnah12
Odf3b
Ubl3
Eef2kmt
Qtrt1
Tmem53
Armh1
Kcne1l
Hpcal4
Polk
Cert1
Zdhhc23
Atat1
Arl8a
Bdh1
Uba7
Zfp36l2
Rsph9
Adsl
Gatd1
Cdk9
Pyroxd1
Bphl
Plec
Yipf3
Polr1c
Dnal1
Ndufaf3
Ptcd2
Mrps27
Fgr
Dyrk3
Klhl3
Cmpk2
Rps27rt
Rps27
Rab13
Stub1
1700024G13Rik
Dnajb2
Ppp1r11
Celf3
Gas7
Cpd
Clcn4
Bud13
Eri3
Rab40c
Wars2
Rnd2