ChIP-Atlas: Target genes

Potential target genes for Rfx3

Query protein: Rfx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671906 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx3's Target genes

◢ Rfx3: Average

◣ SRX7671906: Embryonic brains

◢ SRX7671907: Embryonic brains

◢ SRX1161945: MIN6B1

◢ Rfx3: STRING

Sema4b
Sik3
Pafah1b2
Yif1a
Tmem151a
Cnih2
Ssbp2
Tox2
Zdhhc1
Rfx1
Tmx4
Wdr90
Mcrip2
Hydin
Muc1
Ttc39d
Adgrg1
Chd4
Ncoa5
Sdcbp
Zmynd12
Ppcs
Ccdc30
Fhad1
Anks3
4930451G09Rik
Sik1
Map9
Mks1
Tppp3
Pold3
Mapre3
Spef2
Fam227b
Dtwd1
Metrn
Fbxl16
Rrh
Gar1
Cfi
Bbs5
Ccdc57
Fbxw7
Pnma1
Wfdc3
Dnttip1
Dync2h1
Dcun1d5
Ufsp2
1700029J07Rik
Lrriq1
Fosb
Pigx
Cep19
9530077C05Rik
Golgb1
Eaf2
Xrcc1
Pinlyp
Eif2b2
Mafk
Wdr34
Samd4b
Gmfg
Map1a
Nudt2
Kif24
Srek1
Poll
Dpcd
Cfap20
Cfap44
Zcchc3
Sox12
6820408C15Rik
Dnajc16
Casp9
Kifbp
B9d1
Ubl5
Pin1
Fbxl12
Cfap298
Dync2li1
Rundc1
Ptges3l
Aarsd1
Dyrk1a
3110082I17Rik
Wdr31
Bspry
Tlcd3b
Aldoa
Cfap65
Tctn2
Syt5
Ropn1l
Fos
Map6
Rfx3
Pofut2
Dyrk1b
Fbl
Fam214a
Tspan31
Marchf9
Cdk4
Tex44
Tctex1d2
Ccdc181
Ccdc39
Dusp18
4921536K21Rik
Mink1
Arl6
Morn2
Dhx57
Nr2f2
Sipa1l1
Tecpr2
Cinp
Akap11
Lmbrd1
Mlec
Saxo2
Efl1
Wdr66
Lrrc49
Agtrap
Lfng
Cirbp
Prr7
Csnk1g2
Josd2
Aspdh
Dyrk3
Rer1
Morn1
Setd1a
Orai3
Ppm1e
Prdm4
Ascl4
Ccdc13
Mapk8ip1
1700029I15Rik
Trappc9
Nucb2
Ankrd13d
1700030J22Rik
Rin1
Brms1
B4gat1
Dad1
Abhd4
Wdr27
1600012H06Rik
Slc6a19
Meig1
Dclre1c
Ptpn13
Txndc17
Med31
4933427D14Rik
4930563E22Rik
Eif4a3
Card14
Bbc3
Gdf1
Cers1
Ttll10
Ube2o
H1f10
Prr3
Gnl1
Abcf1
Foxj1
Tmem138
Cyb561a3
Hspbp1
Brsk1
Fez1
Prkcsh
Ccdc151
Tsnaxip1
Ranbp10
Rlbp1
Fanci
E4f1
Pi4k2a
Morn4
Etfbkmt
Usp30
Svop
Hspa12a
Eno4
Nek2
Rtca
Dbt
Pfdn5
Myg1
Lmtk3
Nup50
Dpf1
Gcc2
Caly
Rpl30
Erich5
Stk32c
Lrrc27
Fam131a
Wdr60
Shroom3
Ccdc158
Mindy4
Phc2
Fam204a
Gstt2
Tasp1
Ccdc113
Ap3m2
Ywhaz
Pltp
Iqsec1
Yipf3
Polr1c
Lrrc73
Dixdc1
2310030G06Rik
Prepl
Camkmt
Ccdc34
Cfap36
Jam3
Tmem9
Cln6
Ssbp4
Isyna1
Irak1bp1
Gtf2f1
Cfap54
2410004P03Rik
Cep112
Elmod2
Ubn2
Rnf141
Cherp
Tmem91
Tgfb1
B9d2
Chchd6
Klhl18
Kif9
Sde2
Zfp24
Itsn1
Cryzl1
Cetn4
Bbs12
Cplane2
Tlx2
Pcgf1
Lbx2
Rara
Pak1ip1
Sirt7
Pycr1
Mafg
Sclt1
D3Ertd751e
Crnkl1
Cfap61
Stoml2
Pigo
Fam214b
Mbd4
Ift122
Katnal2
Marchf8
Wdfy1
Nap1l1
Rsph1
Morn3
Cbx5
Usp2
Cep162
Oscp1
Jund
Iqcn
Ccdc184
Asb8
Mettl15
Kif18a
Ankef1
Klhdc10
Sun3
Gm11992
Wdr78
Mier1
Zc3h3
Cnpy3
Sh3bgr
Lca5l
Socs3
Lrrc56
Hras
Sirt3
Psmd13
Wdr35
Sf3a1
Ccdc157
Tbc1d32
Cfap43
Tmc3
Tada2b
Ccdc96
Ankfy1
Ccdc65
Rnf32
Rhbdd2
Brd3os
Zfp839
Mok
Spats1
Tsga10
Lipt1
Lrrc6
Bbs1
Smg7
Ubxn6
Hdgfl2
Dmwd
Dmpk
Smpd2
Ppil6
Trim2
Naa40
Mtf1
Gnb2
Zfp628
Ssc5d
Nat14
Wdr6
Maats1
Cox17
Ifi27
Ddx24
Lmna
1700037H04Rik
Iqch
Aagab
Prkar1b
Dnaaf5
Ap1m1
Armc3
Braf
Oxnad1
Dph3
Cfap97d2
Traf3ip1
Zfp523
Timm10
Smtnl1
Eri3
Ndufs5
Rgl1
Arpc5
Tubgcp3
Tomm7
Mycbp
Spata7
Agbl3
Gemin8
Dnah2
Ap1s1
Ralgapa1
Tceal1
Ing1
Cars2
Ddt
Cabin1
Stk40
Lsm10
Tube1
Fam229b
Efcab1
Camk2a
Cfl1
Trub2
Acap2
Ift57
Tpi1
Spsb2
Sctr
Cfap221
S1pr3
Osbpl7
Mrpl10
Lrrc46
Ppp1r7
Pask
Gpn3
Fam216a
Ppp2r1a
Tmem216
Hat1
Cfap161
Dynll1
Mapre2
Spef1l
Dffb
Cep104
Trip4
Csnk1g1
Mib2
Prkar1a
Ebna1bp2
Cfap57
Snapc2
Ctxn1
Pbx2
Gpsm3
Rhpn1
Mpc2
Dcaf6
Ptdss2
Gtf3c4
Uvrag
Tm9sf1
Ipo4
Arvcf
Armc9
AI429214
Pifo
Chchd3
1110051M20Rik
Rnf182
Txndc11
Dnajc1
Kcnn1
Ccdc124
Mark3
Gnat2
Gm12500
Ampd2
Neurl4
Acap1
2810408A11Rik
Srms
Fndc11
Gde1
Ccp110
Trit1
Dlec1
Lrrc23
Eno2
Dok3
Ddx41
Kcnip3
Nme7
Blzf1
Cdkl4
Pgap3
Ttll9
Parp4
Cenpj
Upk3bl
Pick1
Pitpnm1
Cdk2ap2
Gsg1
Tnpo1
1700010I14Rik
Plch1
Dbn1
Ttc41
Hsp90b1
Dagla
Ak1
Fam151b
Id2
Parp8
Dnajc15
Zmynd10
Rassf1
Nprl2
Cyb561d2
Msmo1
Dnajc27
Ino80c
Peli1
Sertad3
Tbc1d19
Dlg4
Hsdl1
Dnaaf1
Cdk9
Katnal1
Nsmce1
Nectin4
Klhdc9
Ripor1
Trim39
Ehd1
Celf3
Lins1
Ttll3
Odf2
Cfap74
Ccpg1os
Ccpg1
Dpy19l2
Zfyve28
Cfap99
Zbtb46
Actr6
Mrps9
Lrguk
Nsdhl
Cetn2
Ywhaq
Tmem167b
Taf13
Psap
Kdelr3
Kcnj4
Ift22
Arid4a
Prmt5
Aqp4
Slf1
2210408I21Rik
Drc1
Adgra1
Spice1
Efhc1
Gtf2e2
Ap3d1
Ccdc187
Rlf
Ovca2
Hic1
Phf20
Sec61a2
Nek11
Aste1
Traf3
Ift52
Alms1
Rap2a
A930007A09Rik
Tpm3
Nkiras2
Dnajc7
4933434E20Rik
1700094D03Rik
Tbcel
Slc4a8
Galk2
Cops2
Kmt5c
Pak4
Epb41l4a
Tekt4
Fank1
Dhx32
Abhd2
Mthfr
Clcn6
Ppp1r16a
Foxh1
Cenph
Tctn3
Entpd1
Sec16a
Skiv2l
Nelfe
Ttc26
Iqca
Leng8
Dnajc10
Cfap69
Rfc5
Tfip11
Dcp1b
Tmem107
Ubxn11
Cd52
Taok2
Krt8
Mfsd4b4
Stx18
Hsp90aa1
Mxi1
Mlf1
Orai2
Micos10
D230025D16Rik
Glipr1l3
Caps2
4930505A04Rik
Ift81
Fam90a1b
Apoo
Tarbp2
Map3k12
Ccdc126
Timm13
Lmnb2
Ywhae
Ptges2
Lcn2
Spata2
Rnf114
Uhrf1
Arrdc5
Ppil4
Slc25a3
Stpg1
Nipal3
Tmem209
Ssmem1
Sf3b5
Stk11ip
Kiz
Ppp5c
Thbs3
Mtx1
H13
Tmem218
Mcidas
Ccno
Tmem231
Gabarapl2
Spata6
Dnaaf2
Dhx16
Rem2
Mapk15
Rpn1
Pbx4
Lpar2
Kif6
Ddit4
Myo1e
Afg1l
Capn10
Nbr1
Brca1
Cenpf
Fgf14
Ccar2
9930012K11Rik
Daam1
Knop1
Iqck
Spcs1
Glt8d1
Trip12
Fbxo36
Fbf1
Hspa2
Marchf10
Elfn2
Dnah10
Abi2
Tex9
Lgals3
Ift88
Plekhb1
Srf
Cul9
Intu
Rrp12
Fam227a
Cby1
Trmt44
Acox3
Msi1
Nova2
Kcnj14
Cyth2
Glipr1l1
Sgsm1
Zfp287
Qtrt2
Ccdc191
Odc1
Derl1
Ccnc
Ubxn2b
Gtf3c1
D430042O09Rik
Pomt2
Gstz1
Srfbp1
Akna
Bub1
Cdca4
Ahi1
Eif2s1
Atp6v1d
Copz1
Ndrg4
Rasal2
Rtl6
Wdpcp
Mdh1
Dnajc24
Med9
Lyrm4
Fars2
Tnks
Slc25a14
Thnsl1
Enkur
Snrpd2
Qpctl
Dennd2a
Timm21
Fbxo15
Stxbp4
Cox11
Zswim2
Fscn2
Actg1
Spata45
Aopep
Cep128
Pspc1
Dnaaf3
Mab21l4
Crocc2
Tnni3
Rhobtb2
Cacfd1
Pkig
Wars2
Igsf11
Fam98b
Mast3
Phc1
Klhl7
Naa20
D5Ertd579e
Cplane1
Dnah11
Stk33
Kif3b
Mrpl39
Dym
Hmgcr
Wdr13
Mafa
Zfp36l2
Gm1604b
Pde4a
Mfrp
C1qtnf5
Spg21
Notch1
Rab11fip2
Zc2hc1c
Acyp1
Hmgn2
Trpm2
Cfap410
Mocs3
Dpm1
Ppp1r12c
Pla2g2e
Wwox
Wdr38
Rpl35
Arpc5l
Tsen2
Ankrd54
Thop1
Sgta
Stx8
Cfap52
Coq3
Coa8
Bag5
Ttc34
Dusp6
Rp9
Bbs9
Ruvbl1
Sdccag8
Cep170
Mapk10
Rabl2
Hsph1
Ulk4
Zfp775
Repin1
Gm5111
Zfp580
U2af2
Ccdc106
Fgr
Cnnm2
Deup1
Dnal1
Rsph4a
Calm2
Lpin2
Lrrfip1
Cmtr2
Nsun7
Glb1l2
Rfx2
Cdkl1
Smc6
Gen1
Arf2
Pik3cd
Hepacam
Spag1
Polr2k
Nme5
Wdtc1
Fam110a
Cystm1
Psmc3ip
Mlx
Gnaz
Zswim1
Spata25
Ctsa
Rnf5
Agpat1
Ager
Slc9a8
Get1
Ccdc180
Bdh1
Cpd
Zfp407
Cluap1
1700037C18Rik
Lpin1
Ecrg4
Tcea2
Sox18
D130043K22Rik
Nsmf
Pcsk1n
Eras
Dner
Adgb
Tufm
Zdhhc23
Pik3r2
Tedc1
Crip1
Zeb1
Cdc37
Ttc21a
Gorasp1
Ano3
Smpd3
Sap18b
Sap18
Rrp7a
Trim9
Safb2
Safb
Ankrd42
Gdf11
Lbhd2
Exoc3l4
Rasl10a
Gas2l1
Odf2l
Wdr7
Usp29
Peg3
Tpgs1
Madcam1
Togaram1
Klhl28
Smc1b
Fam81a
Zfp688
Itpkc
Coq8b
Rdh5
Bloc1s1
Dnaja1
Erf
Nbas
Shq1
Ift172
Gckr
Fndc4
Sorbs2
Mrpl22
Gemin5
Wdr17
Nap1l4
Tmem89
Rsph3b
Nmb
Acadvl
Pdgfa
Kpna1
Dmkn
Qsox2
Lsm14b
Nanos2
Mypop
Btbd9
Ptpn4
Ubxn10
Tmem108
Pla2g2c
Spout1
Endog
Lekr1
Mthfd2l
Cog7
Rbks
Babam2
Olfr1344
Fzr1
Dohh
Agbl4
Dctn1
Wdr54
1700003E16Rik
Ttc13
Arv1
Syngap1
Cuta
Tcp11
Jun
Map3k14
Slc25a46
Cdc14a
Gata2
Mzf1
Cep164
Bace1
Dcaf12
Cwf19l2
Acot1
Aspm
Serf1
Bdp1
Polk
Cert1
Pard6a
Enkd1
Acd
4933405L10Rik
Zc3h10
Rpl41
Zbtb11
Rpl24
Dnaaf4
Ppm1g
Lrp8
Nek4
Itih1
Tmem260
Tent5c
Denn2b
P4ha1
Nfatc1
Esrra
Catsperz
Cipc
Itgb3bp
Efcab7
Rcc1l
Gtf2ird2
Tsr1
Sgsm2
Otub1
Ap2a1
Znhit1
Plod3
Rps6kc1
Yipf5
Mef2d
Bcl2l1
Dusp3
Cfap97d1
Arrdc3
Per1
Cfap20dc
Shank3
Fstl3
Spaca9
Ak8
Dnah9
1700016K19Rik
AU041133