ChIP-Atlas: Target genes

Potential target genes for Aire

Query protein: Aire
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9940420 | Thymic epithelial cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Aire's Target genes

◢ Aire: Average

◢ SRX9940416: Thymic epithelial cells

◢ SRX9940417: Thymic epithelial cells

◢ SRX9940418: Thymic epithelial cells

◢ SRX9940419: Thymic epithelial cells

◣ SRX9940420: Thymic epithelial cells

◢ SRX9940421: Thymic epithelial cells

◢ SRX9940422: Thymic epithelial cells

◢ SRX9940423: Thymic epithelial cells

◢ SRX2437689: Thymus

◢ SRX2437690: Thymus

◢ Aire: STRING

Tmem125
Gm3448
Gm3417
Tcte3
Ermard
Mob4
Mpp7
9030025P20Rik
Gm3435
Cltc
Nudt9
Tram1
Chmp7
Nfkbid
Hcst
Irf2
Il15
Htra2
Dqx1
Aup1
Get4
Tnfrsf8
2300009A05Rik
Dnajc16
Casp9
Cfap20
Mapkapk5
Eapp
Rab33b
Birc2
Birc5
Kcnn1
Nupl1
Odc1
Birc3
Vps26c
Map3k7
Mmaa
Srrm2
Safb2
Safb
Nme1
Zfp428
Kbtbd3
Tex14
Pum3
Fas
Ythdf2
Clptm1
Tdp2
Acot13
Slc35g3
Polr2a
Nfat5
Sh2d4b
Hmgxb3
Eif4a2
Vta1
Hjurp
A730008H23Rik
Aebp2
Atp13a2
Tmtc3
Cep290
Gpn3
Fam216a
Psmd3
Spata5l1
Usp32
Cnot11
Ifnar1
Ccnt2
Dcp1a
Gtf2b
Pole3
Alad
4933430I17Rik
Plekha1
Cdkn2aip
Shld2
Glud1
Tm9sf2
Tcp1
Mrpl18
Clptm1l
Zfp148
Ube3a
Dennd4a
Sephs2
Xpnpep3
St13
Ubr4
Trim63
Rsbn1
Slc13a1
Ppp1r8
Timm13
Cdk11b
Wdfy2
Hspa1l
Hspa1a
Srrm1
Isg20
Hspa1b
Spen
1810037I17Rik
Map2k7
Slc25a32
Dcaf13
Rps12
Med17
Spdye4b
Rbak
Zfyve16
Eif4e
Alox12e
Jak2
Creb1
Gbp10
Uvssa
Ube2n
Pum1
Pde1c
Sde2
Cdc42bpb
Slco5a1
Arf6
Gapvd1
Faf1
Plb1
Rbm7
Gm5617
Gpr152
Cabp4
Hint3
Abhd10
Actr3
Txnl1
Pan3
Xpo5
Polh
Dph5
Chordc1
Notch2
U2surp
Tmem107
Ppp1r15b
Taf9
Rad17
Ak6
Ikzf5
Acadsb
Grb2
Phb2
Emg1
Proser1
Nhlrc3
Sirt6
Ankrd24
Arf4
Rbpj
Btbd8
Tmf1
Man1b1
Sh3bp5
Tomm7
Trmt2a
Ranbp1
Sdhaf2
Cpsf7
Atg5
Zfp317
Tsn
Lyrm9
Ankrd40
Thoc1
Sdhb
Rfesd
Sspn
Utp25
Cacybp
Srr
Smg6
Csnk1a1
Trip11
Clasp1
Ap1g1
Nelfa
Fxr1
Fubp1
Dnajb4
Skil
Ppp1cb
Clpx
Mthfsl
Rbm17
Adam17
Snx5
Mgme1
Kbtbd2
Ndufab1
Snn
Calcb
Virma
Abcf3
Mfsd4b4
Srcap
Cldn13
Cct4
Hspa4l
Dock2
Polr3f
Dzank1
Ankle2
Adamts13
Mthfs
Tbata
Bmf
Ttll5
Erg28
Ppp1r2
Rhbdl2
Rbm6
Cxcl10
Eif4b
Prpf19
Smap1
Ppfibp2
Cherp
Gas7
Nup214
Zmpste24
Trim37
Tsga10
Tfg
Dars2
Mtf2
Rad9b
Zfp62
Cdc34
9130401M01Rik
Eif5a
Smc6
Gen1
Sepsecs
Ranbp2
Ralgapb
Prr14l
Rnf149
Lsm14a
Ptp4a2
Zfp719
Rasl10a
Gas2l1
Utp3
Adprh
Gm2396
LOC100861978
LOC100861969
Gm2506
Gm13306
Ccl27b
Zup1
Bach2
Matr3
Usp12
Eef1g
Ckmt1
Alpk1
Mrpl45
Prps1l3
Mipol1
Zcrb1
Pphln1
Etv6
Gosr2
Sec61a1
Psmb2
Erbin
Atxn7l1
Tapbpl
N4bp2l2
Stim2
Chst8
Nfkb2
Slc25a16
Tnfaip3
Cyba
Med6
Eed
Tbck
Aimp1
Esco1
Rad52
Ankrd37
Gmcl1
Zcwpw2
Azi2
Nkap
Pum2
Gm4791
Rnf7
Cct8
Bbs2
Rtcb
Zfp36l1
Hibch
Strn3
Ap4s1
Ube2d2a
Sprr2a2
Sprr2a1
Haus6
Il10
Ndfip2
Uspl1
Rab15
Tufm
Akirin2
Trmt5
Slc38a6
Exoc5
Ap5m1
Dcaf12
Ddi2
Pex3
Adat2
Sys1
Zmym5
Mis18bp1
Ndufa9
Akap3
Snrpc
Pcgf5
Serp1
Eif2a
Zc3h18
Rab6a
Mcl1
Tmem175
Gak
Ube4a
Rbl2
Mtres1
Pkn2
Cdca4
Trpm7
Trappc8
Gspt1
Riok1
Cage1
Atf6
Isy1
Anapc10
Abce1
Ubqln1
Junb
Zfp949
Secisbp2l
Kdm1a
Poc5
Opa1
Ipo8
Map3k14
Hnrnpf
Rb1cc1
Tor1aip2
Tor1aip1
Sprr2a3
Ndufa10
Zfp740
Csad
Smg7
E130309D02Rik
Eif2s1
Atp6v1d
Lsm6
Usp16
Ppm1a
Slc35f5
Enpp4
App
Serinc3
Kcnk6
Them4
Bsdc1
Zfp623
Kmt2e
Pex2
Pdap1
Bud31
Arhgap11a
Golga7
Angel2
Ttc14
Ovol1
Dclre1b
Ap4b1
Triap1
Gatc
Cep120
Trip12
Fbxo36
Mrpl58
Ltbr
Kat6a
Wdr41
Uchl5
Ro60
Napg
Morc3
Wbp4
Elf1
Fam122a
Traf3
Ywhah
Slc5a9
Slc35b1
Psmc4
Rubcn
Fyttd1
Sppl2a
Atp5j2
Poli
Mindy2
Kctd13
Mllt6
Plekha8
Fkbp14
Rer1
Morn1
Ufl1
Zfp213
Gtf2e2
Golga1
Slc9a8
Brwd1
Otud7b
Usp6nl
Ccnt1
4930415O20Rik
Dhx16
Klhl38
Spa17
Siae
Kdm3a
Zc3h15
Terf2
Unc13a
Jak3
Zw10
Iba57
Trmt44
Kctd5
Sav1
Zbtb41
Mvd
Thap12
Aftph
Crbn
Zfp408
Arhgap1
Dnajc10
Tcea1
Adnp
Smad4
Kif13b
Herc4
Tefm
Rnf183
Mrto4
Emc1
Lnpep
Pcbp1
Slc44a1
Wdpcp
Mdh1
Ilkap
Akap10
Gar1
Psmb6
Unkl
Percc1
BC003965
Snrnp25
Il9r
Ywhaz
Zmiz2
Atg10
Ndufs5
Tmem147
Smim14
Cipc
Zfp12
Ergic2
Retreg1
Ipmk
Cisd1
Ctnnb1
Clasp2
Nr1d1
Commd1
Frg2f1
Foxj3
Dio1
Nras
Phkb
Itfg1
Fntb
Naa25
Tmem39a
Crtc2
Bin1
Ubc
Kin
Atp5c1
Ube3c
Llgl2
Rbm26
Ube2cbp
Dop1a
Chmp6
Ran
Polr2e
Msra
Il4i1
Wdr43
Tmem33
Atg4c
Rapgef6
Ccm2
Aatf
Ccdc126
Cfap97
Usp37
Cnot9
Ahcyl2
Sft2d2
Lig4
Abhd13
Tnn
Csk
Pyroxd1
Tln1
Creb3
Bst1
Luc7l
Ptpn2
Rab1a
Mark2
Unk
Scn2b
Slc25a19
Sf3a2
Plekhj1
Sesn2
Sirt1
Zbtb2
Mtrex
Dhx29
Klhl18
Kif9
Esyt2
Gamt
Dazap1
Atl2
H2bc4
H2ac6
Rac1
Arfgef1
Birc6
Ptpn21
Gtf2i
Zdhhc21
Golga4
Gm10634
Mrpl10
Lrrc46
Zfp959
Crebl2
Tubg1
Retreg3
Usp48
Ddx52
Mef2a
Ccdc91
Hexim2
Pbrm1
Gnl3
Rhobtb1
A930033H14Rik
Chac2
Ccdc62
Tmem242
Rasa1
Gm13285
Gm13290
Gm13289
Trak1
Eif3d
Trim65
Cop1
Cd52
Ubald1
Ppp1r12a
Nrf1
Atr
1700065D16Rik
Il18r1
Ep400
Zfp119a
Tars
Fem1b
Cdc5l
Armc1
Zfp119b
Popdc2
Znhit2
Mrpl49
Fau
Supt4a
Fktn
Ykt6
Rptor
Ankrd33b
Carmil3
Ubn2
Yif1b
Agk
Cbfb
Fdxacb1
1110032A03Rik
Hspa9
Strip2
Utp15
Ankra2
Mrpl22
Gemin5
Pml
Rhot1
Cisd2
Mrpl48
Ncbp2
0610012G03Rik
Cyrib
Snd1
Pdss1
Usp8
Rnpc3
Trib1
Fbxw2
Mycbp
Mybpc2
Scrn3
Cir1
Pifo
Mrpl17
Tssk6
Ndufa13
Rbm48
Pex1
Ccar2
Anapc11
Alyref
Smarcc1
Naa30
Kpna3
Orc4
Mbd5
Septin7
Fkbp1a
Abcc1
Picalm
Lrriq3
Fpgt
Scamp1
Tmprss4
Dnmt3l
Aire
Thumpd3
Cops7a
Polr3b
Rwdd1
Rel
Srsf1
Tarbp2
Map3k12
Calm3
Myl6b
Myl6
Wdr70
Spg7
Slc35a5
Atg3
Tgif1
Fbxw7
Nfxl1
Chd9
Cnot8
Mknk1
Prdm4
Cdk5rap2
Gtf2h3
Eif2b1
Klf10
Slc7a7
Bcl7b
Tomm20
Magi1
Fhit
Srsf9
Jmy
Ubtd2
Golga5
Get1
Pop7
Cfap298
Cops8
Kpna1
Zfpl1
Tmem262
Cdca5
Rab5if
Ndufaf5
Esf1
Mfhas1
Rassf6
Snrnp70
Dgat1
Tmed2
Ubac2
Psmf1
Iffo2
Dhx33
Dcps
Pip4p2
Metap2
Ero1a
Map2k5
Glcci1
Ugcg
Pofut1
Plagl2
Tpt1
Oard1
Nfya
Nrep
Gtf2a1
Rad21
Ddx20
Rock1
Ptges3
Gopc
Rps10
Scaf11
Supt3
Yes1
Mfsd14a
Slc33a1
Nup50
Angptl6
Glt28d2
Bdnf
Mex3c
Atp5g2
Phip
Phf12
Mgat1
Nup153
Zmym2
Naa40
Map3k8
Ncf4
Trmt1l
Swt1
Stat1
Snx14
Taok2
Rassf1
Cadps
Atp8b1
Setbp1
Ten1
Acox1
Lsm14b
Mideas
Scrib
Dbi
3110009E18Rik
Tjp2
Tbc1d10b
Mylpf
Cep350
Tbc1d20
Wdr53
Fbxo45
Ifrd2
Tet1
Klhl9
Dr1
Per1
Pafah1b1
Ppp3cb
Ppp1r3e
Nuf2
Atxn2l
Ptgr2
Arsg
Ythdc1
Serac1
Gtf2h5
Itgb1bp1
Cpsf3
Ranbp3
Lipg
Mllt10
Tex2
Camsap2
Rev1
Zbtb25
Zbtb1
Osbpl3
Gtf3c2
Mtmr10
Cdk8
Fra10ac1
Zbed4
Nagk
Mettl23
Jmjd6
Aaas
Cluh
Pan2
Tfb2m
Cnst
Ncoa5
Yipf5
Gtdc1
Ccser1
Xrcc4
Tmem167
Tbk1
Rnf38
Arid3b
Trir
Get3
Olfm4
Atf7ip
Gbp9
Ctdp1
Uggt1
Eif2s2
Med18
Cant1
Tgfbr3l
Snapc2
Zfp473
Vrk3
Ddx42
Ccdc47
Htt
Jun
Riok3
Xrra1
Spcs2
Vps11
Cnot4
Zc3h12a
Srsf10
Tmem161b
Spata1
Gng5
Sft2d3
Ptcd1
Cpsf4
Ctcf
Rev3l
Gfra4
Stk32c
Lrrc27
Nsmce4a
Pnrc2
Surf6
Emp3
Ccdc114
Pold3
Mterf1a
Ccdc90b
Rplp2
Pidd1
Lta4h
Slc18a1
Atp6v1b2
Ctnna1
Psmd14
Adss
Dock10
Ttc32
Sema4c
Tmx3
Rrnad1
Isg20l2
Hipk3
Tnp2
Socs1
Tvp23a
Pdcd1lg2
Arrdc3
Rmnd1
Armt1
Stx11
Stag1
Neo1
Capn2
Hnrnpa3
Ahnak
Txnl4b
Dhx38
Vapa
Bud13
Tab1
Dcaf10
Krt14
Ublcp1
Nfx1
Kntc1
Stap2
Mpnd
Rnf13
Rgl1
Arpc5
Cmtr1
Fbxw5
C8g
Eif4h
Raph1
Coq3
Pdik1l
Tlk1
Resf1
Tpr
Odr4
Mtmr6
Gfod1
Rnf111
Baalc
Exosc5
Bckdha
Sinhcaf
Pcmtd1
Prss40
Gclc
Pdcd4
Traf2
Synj2
Mettl25
Ccdc59
Mbd6
Ddit3
Irf9
Bmp2k
Tmem19
H3c6
Spg21
Nadk2
Fam98b
Prrt2
Pagr1a
Mvp
Dffb
Cep104
Slc25a11
Rnf167
Itga6
Atrn
Rbbp8
Pak1ip1
Tasor2
Ppwd1
Cenpk
Ssbp4
Mtmr2
Ipp
Csrnp3
Ptpn23
Sdha
Ccdc127
Ints6
Gm13287
Gm13275
Tex30
Gm13279
Gm13278
Larp4b
Loxl4
Fitm2
Hps5
Gtf2h1
Amz2
Nek11