ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100251 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◣ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG1354
Obp99b
bark
Tpst
CG46311
dco
ORY
CG3358
Sur-8
CG34280
CG34279
htk
CG10600
Aps
RpS21
CG3104
Tak1
InR
CG43693
sgll
CG2993
SteXh:CG42398
pkaap
crp
nrv2
Nc73EF
CG9030
pdgy
N
Lasp
Dab
CG43954
unc-5
ush
CG14903
Ste12DOR
Toll-7
mthl14
E(bx)
nxf4
CG8306
CG13689
bcd
Ubr1
CG13896
fiz
CG14406
DCX-EMAP
E(Pc)
goe
RpS28a
Mgat2
Axn
wcy
CG4949
VhaAC39-2
Ptpmeg2
Fancm
Myd88
Oli
CG12617
shot
stl
CycB
Hml
sgg
wgn
CG12236
SK
PDZ-GEF
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2B:CG33868
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
CAHbeta
Npc2b
pHCl-1
lectin-28C
CG5790
eIF2beta
RpL37a
TM4SF
Dup99B
velo
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
CG33557
CG2990
Irk1
mtd
Tim17b1
eag
HnRNP-K
His4:CG33881
His4:CG33879
His4:CG33877
His4:CG33869
Moe
CG43058
CG5214
CG17734
Pax
CG13085
Alp12
CG13192
CG42268
Reg-2
CG32813
mRNA-cap
CG32599
His2A:CG33808
His2B:CG33910
His2B:CG33902
His2B:CG17949
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
Atpalpha
CG7956
IM18
Eglp1
CG43209
CG10332
Gmap
CG11788
CG10444
waw
bbx
Grip91
capt
Tango14
Bub1
Bsg25D
Gbeta76C
CG8765
Aatf
CG12057
CG12115
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33882
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
CG32425
AANAT1
His2B:CG33876
His2B:CG33874
His2B:CG33872
Ste:CG33247
Ste:CG33237
Ste:CG33243
Ste:CG33239
Ste:CG33238
His2A:CG33859
His2A:CG33856
His2A:CG33853
His4:CG33875
His4:CG33873
His4:CG33871
bves
Stt3A
caps
CG42354
CG42353
Mp
galectin
Pomp
ctrip
ast
S
RpL5
CG11334
CG11333
ebi
AP-2alpha
Rubicon
prage
Adar
mtSSB
Pgant4
RpS19a
Rok
dia
Rhau
Cul2
geminin
Ste:CG33236
trc
CG32221
Oda
CG2202
CCT5
Eip63E
CG7741
CG15456
pzg
CG12974
CG8549
su(w[a])
beat-IIIc
CG31909
CG9920
Muc26B
RpS26
DNApol-eta
CG14562
RpS7
His4:CG33907
CG43346
mAcon1
CG43345
rtv
Dlic
vls
bwa
RpL21
mbo
bocks
CG8312
Frl
CG13484
CG10887
CG8944
CCT6
eIF3d1
l(1)G0320
RpS28b
knk
omd
flfl
udd
Cul4
CG12702
CG2076
snama
Sgt
BicD
p47
atl
Syx18
CG7044
CG5745
wls
Adck5
scra
CG1360
mts
Rack1
Vps29
Tfb4
Ranbp21
Elys
Nopp140
CG7148
plu
RpS18
CG8908
CG7785
CG13293
fax
CG34274
CG14837
Uba1
RtGEF
La
CG6454
mahj
PTP-ER
VhaM9.7-b
COX8
CG5746
Sf3a2
CG42588
Patr-1
CG3995
Yif1
CG6425
TM9SF4
Ski6
CG16812
Maf1
Plap
CG31922
RpL31
CG12929
EMRE
Spec2
RpL13A
CG2911
l(1)G0004
jb
CG18545
rad50
mRpS29
Rev1
MED30
CG3402
cana
cmet
RpL36A
Megf8
RpL3
CG6693
RpL30
RpS10b
sty
wda
CG13827
312
CG6791
Cp1
Ptp61F
lmgB
lmgA
CG17834
su(Hw)
RpII15
ifc
mus312
CG42307
mrva
Rpn13
Phb2
lqfR
CG13850
anox
SLIRP1
CG18870
RpL23
CG13531
spict
CG5776
CG9215
CG8097
RpS9
nAChRbeta3
Spp
qkr58E-2
qkr58E-1
Strip
PHGPx
glo
COX5A
srl
CG6833
Prosalpha1
CG30382
CG12822
Atg10
lin-52
CG15771
RpL11
Kdm4B
ValRS
Cdep
srp
eIF3b
Patronin
RpL19
CG3776
mRpS30
Paf-AHalpha
dock
CG3862
CG9281
CG15601
rump
CG18853
zip
uzip
TfIIA-S
Vha44
Hmgs
eIF3f1
CG5916
CG5903
stmA
Zdhhc8
BCL7-like
spn-F
CG1750
Incenp
Br140
CG17343
CG17068
Rab10
CG11403
Shark
Flacc
ssp
RPA2
CG30349
CCT8
SrpRalpha
Idh3a
CoRest
RIOK2
GlnRS
Ste:CG33245
Ste:CG33244
Ste:CG33241
Ste:CG33242
Ste:CG33240
eIF6
DNApol-alpha60
CG14407
Pfdn5
Pif1B
Pif1A
CCT7
Tgt
CG5126
Gss2
Gss1
eIF3j
CG4332
CG4318
Ndc1
RpL23A
fdl
Cyt-c1
Klp64D
Gos28
Cpsf73
vig2
TTLL5
CG31510
sinu
nSMase
hob
CG11885
CG12818
Bruce
RpS4
RpL26
CG3902
slmo
IPIP
nop5
wds
CG13760
RpLP1
CG13690
sax
Nop17l
Ran
Lint-1
Dph5
CG9344
Pli
RpS15
Ntf-2r
bsf
CG5510
SmE
CG34132
kel
tral
sti
kraken
CG4291
Hmt-1
CG7379
fbl
Vps36
Liprin-beta
CG5498
Caf1-105
CG11777
Marf1
sav
Ublcp1
Spx
Rbcn-3A
VhaM9.7-c
Stt3B
CG11839
CG42676
JTBR
r-l
dmrt93B
nclb
CG30016
Xbp1
pav
CG33969
mtRNApol
CG14339
CG12025
HBS1
Clic
Nup93-1
Tctp
SdhC
Scgbeta
CG17202
snRNP-U1-70K
eEF2
RpS20
CG17271
bic
RpS8
CG15514
Pino
GAPcenA
CG7182
CG32452
ArfGAP3
garz
CG8841
TBC1D23
Dpit47
Adf1
CG30122
trbd
dmt
atms
CG9467
CG8526
TAF1B
Invadolysin
pll
TfIIA-L
Vps16A
TrpRS
Su(var)2-HP2
Sec61beta
dgt6
Vha100-1
tinc
Alg1
Nacalpha
MED4
CG6700
CG7650
Cdc27
mthl2
TM9SF3
tea
CG1513
CG44088
COX7A
Arl2
ema
RNaseZ
CG12909
Zif
CG9727
mod
krz
CG10866
Usf
CG15912
CG14715
CG33172
CG42759
CG14985
CG1620
Rpt5
RanBP3
Nph
Nlp
Atg14
Ubc7
SMC3
CG11377
l(2)k10201
Non1
CG31100
CG11980
PNUTS
kri
S6k
CG3430
CG13775
Ste:CG33246
dbe
Ttc19
Acn
eEF1gamma
RpL4
BCAS2
Rrp46
Irp-1B
CG11883
cid
cbc
CG31637
RpS30
beta-PheRS
SERCA
eIF3e
AdenoK
RpS12
rux
MCTS1
Mpp6
E2f2
mRpL12
Cen
CG2617
Rbpn-5
CG31550
CG17019
Not3
Tfb1
mRpL17
Tudor-SN
CG34263
Nelf-A
CG3337
vsg
SH3PX1
RpL14
Nelf-E
Txl
CG10576
RpL15
kin17
VhaPPA1-1
pen-2
Ote
eff
nonA-l
yps
CG4610
gammaCOP
Mtr4
zda
trbl
CG33080
CG4645
Brms1
Vha55
Snx3
DJ-1alpha
Abd-B
Svil
CG31279
CG12986
lace
CG12007
nej
CG14762
CG13306
Fkbp59
CG2991
CG14535
for
CG10357
CG6405
CG15025
fal
GILT2
LanB2
Wdr62
CG11444
Ufd1-like
NaPi-III
RpS11
Eh
CG10232
Pop2
CG6928
stc
Asator
mdy
CG5886
CG14545
CG6345
Gp150
Spn28Db
NLaz
Syn2
IFT52
COX5B
ftz-f1
CG34033
CG1648
Nhe3
CheB93a
cpo
ball
His2Av
Tlk
CheB93b
LSm7
BuGZ
Lap1
ADPS
Jafrac1
Rlip
dnt
CG13086
Rala
Vm32E
Raf
Mtpalpha
Gycbeta100B
CG33632
CG42495
CG17565
Eaf6
Pdi
Pez
Cpr
tzn
CG3698
CG33177
CG15536
CG4293
Appl
Snp
CG10038
CG9018
ACXD
CG30286
GlyP
CG4259
CG43658
ome
CG43121
CG13501
CG3556
Ufl1
CG1943
Csp
CG11523
CG17855
CG3638
OXA1L
Rsbp15
CG4860
retm
frj
Alg3
CSN3
CG11456
CG10947
CG43678
CG6878
CG14321
CG6329
CG42560
CG42559
CG7509
dpr20
pan
Drp1
jp
Mbs
CG31928
Diap1
Poc1
CG5189
CG30120
mIF2
CG9171
CG10011
salr
Dll
CG6040
CG32195
CG13692
CG9988
mud
CG9399
PGRP-LA
Anp
Mtp
alpha-Man-IIb
CG4390
PheRS-m
CG9220
CG6195
CG31220
Gug
CG6983
ASPP
Pcf11
Cyp6a22
CG34054
fz4
CG33465
kug
CG4991
CG16700
CG15517
Panx
CG9485
CG13907
CG34458
GCS2alpha
CG30380
CG30379
CG11873
dlt
alpha-Spec
Cdc37
Pka-C3
CG32700
CG2493
SNF4Agamma
CG4822
CG6903
CG4041
CG18418
bun
CG10804
GXIVsPLA2
CG32107
CG12531
beat-IIIa
CG34106
Sep1
CTCF
CG43066
Pms2
CG30076
Nepl16
asl
CG31076
TMS1
ND-75
CG1632
CG14635
hwt
RhoGAP100F
FeCH
CG9500
Spindly
IFT57
tow
Vha68-1
Tor
CG1090
Eo
prd
pk
CG9044
Dlg5
CG4970
chif
SLO2
l(2)34Fd
Rab14
dpr6
CG3078
Naprt
CG8490
Spn77Bb
CG31087
scramb1
stj
ovo
CG42814
CG42813
Edg84A
gudu
CG5149
Paip2
CG6106
CG42680
Faa
CG11659
CG11391
Tie
CG11353
Xrp1
Socs36E
Trx-2
CG43107
CG17681
CG9855
HmgD
ec
CG31688
pyd
Gip
CG9164
sr
Ca-beta
Men-b
CG6051
CG5151
TfIIS
Mpcp2
CG43246
CG7906
vas
solo
OtopLc
CG34244
CG34435
nrv3
Ugt303B2
CheA56a
CG18808
RpI135
CG10365
CG32117
CG12520
CG10222
Tpi
CG6891
Nlg3
Atox1
Cyp6a18
MCU
Alk
CG14997
galla-1
exu
mthl10
Sdc
CG11356
Lk6
Osi8
CG4734
Oseg2
CG34417
CG5213
mRpL13
CG10602
CG12985
CG13699
CG12355
fz3
per
mRpS18C
Ugt36A1
Sh
ro
T48
CG6966
PsGEF
lbm
CG31960
cib
gol
CASK
CG6839
CG15358
CG43133