ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CTCF | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◣ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
Ipk1
Cib2
CARPB
CG1354
unc-5
Hr51
Abd-B
Tpst
CG46311
CG32633
CG32631
CG11816
VhaM9.7-d
Actn3
CG43980
snu
Sid
CG33346
shot
DJ-1alpha
sick
Rubicon
CAH3
dco
Chchd3
Sox100B
Spn
CG32295
RapGAP1
ORY
soti
Svil
Tak1
Mef2
CG42579
Sox21a
kirre
N
CG43693
TfAP-2
sbr
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Imp
CG15210
CG15209
Wnt4
CG42700
Su(var)2-HP2
Sec61beta
Had2
CG7888
CG12863
CG10481
CG31275
Cam
Neu2
CG7519
CG7202
Ptpmeg2
CG3106
CG8119
CG8117
bcd
Ama
Fancm
InR
Pde1c
mof
Usp30
CG16721
Pde8
RpLP2
CG8311
zen
retn
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CG3358
croc
CG16762
CG34165
CG15282
Aps
CG44439
CG30369
CG2291
CG14760
CG14759
mRpS33
ema
CG17565
CG14881
dar1
CHES-1-like
Jupiter
CG6808
CG15478
CG14711
CG14710
ScpX
CG17597
CG10600
wgn
CG31279
Socs16D
CG12986
CG33120
CG31752
CG17321
Indy
prage
nxf4
CG43290
CG31496
Adar
crol
CycY
Nc73EF
Cpr73D
pkaap
crp
Cyp303a1
CG17329
CG13258
CG8306
CG33226
CG30287
CG30286
CG30283
stl
blw
CycB
CG42260
CG14974
CG10359
CG10357
CG30271
Npc2b
CG9920
CCHa1
CG16898
slbo
bs
lace
CG12007
CkIIalpha-i3
CG13896
CG13895
CG8945
CG4955
nej
btd
Ubr1
Shmt
CG3726
CG12236
CG8303
CG5089
wcy
CG4949
CG43077
RpS21
CG3117
CG3104
CG2991
CG2983
RpS28a
Mgat2
CG7920
Axn
CG4020
Act5C
mtDNA-helicase
RpS2
Bka
CG14762
Tsp68C
Hml
CG8757
CG8750
CG43184
shop
htk
siz
Odc2
Odc1
Dys
Prm
Fhos
CG6576
CG13306
CG31191
Atpalpha
nAChRalpha6
Fkbp59
CG4537
CG34183
lectin-46Cb
lectin-46Ca
CG34033
CG1648
nrv2
dnc
lectin-28C
TwdlE
CG14535
PDZ-GEF
CG43610
CG17377
CG17376
CG17375
CG11236
Sur-8
CREG
Gr89a
Decay
Cad89D
CG42342
for
mthl14
E(bx)
Lasp
Dab
CG9692
CG43954
SNF4Agamma
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG9171
Fmr1
Drgx
CG9380
Ldh
CG10163
Best2
CG7956
cmpy
CG34260
CG15429
Atet
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
GILT3
GILT2
CG15025
CG15919
EbpII
Ebp
beat-IIIc
obst-E
l(3)mbn
Lcp65Ag3
Cpr65Au
CAH15
Lcp65Ag2
otp
fal
Gbs-76A
CG14186
CG14185
Ndae1
CG31909
CG13786
CG13192
EcR
sNPF-R
Wdr62
SPE
Scp2
CG14903
CG14891
gol
CadN
CG46301
Toll-7
eIF3d1
CG18754
CG16710
rtv
Ran
Lint-1
Dlic
CG32668
CG1688
CG15201
LanB2
Gsc
CG3335
CG15615
CG13689
Eip75B
mtSSB
ms(3)K81
SPARC
Rb97D
CG6126
CG5500
CG31287
CG34268
CG34267
Rx
Thor
Pgant4
nol
NaPi-III
CG32074
Got1
CysRS
CG30094
Tlk
CG31663
CG15358
CG43658
wdp
ind
Rpn12R
CG43678
Mtpalpha
ush
GABA-B-R3
Eaat2
zip
uzip
jp
brwl
msl-2
Pif1
ND-PDSW
CG31776
Mst36Fb
CG43339
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG9497
CG43338
CG13280
CG13272
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
sced
geminin
Opbp
Dpit47
Adf1
Sod1
mRpL2
Ufd1-like
FoxK
Sr-CII
RpS11
CG8858
CG10365
Eh
CG14331
CG14330
bor
asun
Mst89B
larp
ham
CG13962
stg
SP1029
CG45544
CG31445
CG9410
CG15908
nau
CG10232
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
viaf
Pop2
Grip163
CG6928
mdy
Cse1
stc
CG15269
Rrp46
Irp-1B
CG6345
CG6325
Asator
CG5890
CG5886
CG14545
CG13465
BobA
RpL37a
CG12730
CG5565
CG5561
CG5556
CG31924
CG6118
HisRS
Ggt-1
CG6470
Bx
Spn28Db
Spn28Da
SmE
CG7102
CG34132
bowl
bark
CG31960
Gp150
Act88F
CG7794
DNaseII
CG7785
Myd88
NLaz
CG31659
CG14346
CheB93b
CheB93a
Egm
Ugt49B2
Or98b
Moca-cyp
Gfat2
CG12617
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG6481
tbrd-1
TfIIA-S
Pli
CG9018
ACXD
abd-A
Syn2
Cpr100A
CG15546
CG15545
CG7907
CG4593
CG3032
CG9005
sens
flr
CG10222
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Lk
CG34039
Oseg2
Tsp
cort
Nse1
Nhe3
ftz-f1
CG14270
CG12206
CG10804
CG10803
CG10802
sim
CG43063
raskol
CG12009
cm
CG42308
CG32736
cpo
dila
CG30001
CG42758
CG12017
ball
Lerp
IntS12
His2Av
CG11327
Act57B
caps
CG42268
Usp47
DnaJ-1
Kank
Rim
CG43445
tkv
Cyp4ac3
Bub1
Bsg25D
AP-2alpha
CG2016
Lap1
CG12853
ADPS
Oaz
CG2841
Cyp12e1
CG46270
Gycbeta100B
CG15556
CG15554
phyl
Rala
Mp
glu
LSm7
ChLD3
BuGZ
scyl
Cpr76Bc
Cpr76Bb
CG10257
CG42354
CG42353
Pax
CG13085
Alp12
ssp6
CG6610
CG13295
Ca-beta
CG13293
CG1124
Cpr76Ba
RpS15Aa
Jafrac1
IP3K2
CG15747
CG42346
Rlip
CG5697
CG17278
GNBP2
scrib
Capr
CG42495
dnt
CG13086
CG17349
fra
CG8818
CG8569
CG33632
Rbfox1
GNBP1
gcm
CG31709
achi
CG13151
par-1
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
Vm32E
CG4788
mRpL14
Raf
Ilp6
CG43055
CG33557
CG2990
Men
qvr
E(Pc)
Cht6
lectin-37Db
lectin-37Da
Lectin-galC1
RagA-B
CG11970
pdgy
eag
CG9030
Eglp4
Eglp2
CAHbeta
Oatp30B
Sytalpha
CG32301
Loxl1
CG11334
CG11333
ome
CG4914
CG43121
Lmpt
CG43332
CG14082
mthl2
TM9SF3
Eaf6
CG10591
Reg-2
CG13893
CG2199
Or67c
FucTA
Ptp61F
flz
Eglp3
Pex3
Pdi
CG32147
CG12316
Gr59d
Zasp52
Lsd-2
CG9065
CG33178
CG33177
CG5568
CG18586
fz2
312
Pez
Cpr
Lst
Cdk4
tzn
Spc105R
Six4
CG3698
CG15130
TotX
Grik
mtd
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
Rab3-GEF
CG5599
CG15027
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Ref1
Dpck
CG1943
MBD-R2
CG4115
CG10041
CG10038
Snp
CG44249
elav
CG4293
Appl
CG13501
CG13500
hdly
CG44956
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG10949
Arpc2
CD98hc
GlyP
CG4259
apt
Sfp84E
Os-C
Timp
CG7065
Srpk79D
Csp
CG11523
CG3556
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
insv
Pdp1
Ufl1
CG1965
CG1105
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Rich
Ddx1
unk
VhaAC39-2
CG13829
shep
CG9705
CG13025
Nrt
CG1077
Edg91
CG34281
CG14329
CG14327
Irk1
ncm
RpS26
Osi1
RpI135
Oli
CG6870
velo
Ist1
CG8549
CG13538
Smyd5
Oga
Nelf-A
CG5862
CG3337
Esyt2
CG12502
CG7509
CG18808
CG3638
CG11403
Cpr30B
CG17855
CG13114
CG13113
dikar
SIFaR
galla-2
OXA1L
CG6418
CG6409
Blos4
CG34435
CG34434
mRpS18B
Kua
CG13970
fl(2)d
CG6329
CG13339
Elba2
CG10947
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
retm
frj
Rchy1
sigmar
l(2)dtl
CG5504
Alg3
CG9527
CG14326
CG14324
CG14323
AttD
pan
Poc1
ImpL1
CG14110
CG14107
CG10171
TyrRII
CG14321
CG14325
Prat2
Sesn
CG46429
CG18128
Prp31
Msh6
CG7011
CG6878
CG9777
Lgr1
Atg8b
CSN3
CG3288
CG13255
CG11456
Glut3
CG15040
sm
Fs
PK1-R
CG12402
CG32170
Or67d
PGRP-LC
PGRP-LA
dpr20
Dci
ND-B17.2
scb
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
mRpL55
cdi
CG6040
ATPsynD
nerfin-2
CG33784
Alp13
CG6347
CG6337
CG33465
mthl1
SNRPG
RpS19a
Rok
Obp99d
Dup99B
CG33783
CG42784
CG9498
Arpc5
CG31324
RpL37b
Gr59c
CG42703
CG9876
CG42327
wts
dj-1beta
cindr
ppk7
ppk14
CG9500
ninaA
CG9220
Alp11
CG46468
CG32264
CG5906
Drp1
CG15394
upd2
obe
Trissin
CG5213
waw
bbx
Sep1
Mbs
Diap1
CG33128
CG31928
CG31926
CG31661
CG18131
slim
Ttd14
CG5189
CG30120
CG14715
Prp19
CG9743
dbe
aru
PNUTS
rswl
CG17669
Rsph3
mIF2
east
Ppn
PIG-K
Sox102F
Sprn
CCDC151
CG9988
CG10011
CG14062
Lcp65Ag1
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
salr
Dll
CG8301
CG42851
CG33654
mud
mRNA-cap
Fbxl4
CG32599
CG1434
mdlc
CG4390
CG42853
ex
CG42749
CG4213
SP1173
sky
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
RpS7
CecC
CecB
CecA2
CecA1
Anp
Spn75F
Rpn13
Cp1
CG42806
CG6184
Tim17b1
CG9896
PheRS-m
CG6163
CG6195
CG31220
CG31219
CG6142
CG9593
RPA2
Mtp
CG9272
CG43739
RtcB
Rab9
Gug
CG6983
can