ChIP-Atlas: Target genes

Potential target genes for CNOT3

Query protein: CNOT3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CNOT3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CNOT3's Target genes

◣ CNOT3: Average

◢ SRX886387: Colorectal carcinoma

◢ SRX886388: Colorectal carcinoma

◢ SRX886405: HCT 116

◢ CNOT3: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
FRG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ARL4D
NBPF1
PDE4DIP
MUC1
UNC45B
NLE1
COL23A1
SNX16
MUC12
BTNL9
ZNF718
ZNF595
NUDT4B
NUDT4
ADAMTS9
SPATA2
BAGE5
BAGE4
BAGE3
BAGE
CATSPERE
ADSS2
SUPT20H
GARS1
CRLS1
RBKS
BABAM2
TRAPPC9
TOMM34
STK4
TGDS
GPR180
NIPSNAP1
RPS20
IPO9
VWA8
NDFIP2
SPATA6
RGL1
NPL
PARP4
C2CD5
NET1
SGK3
ZNF717
ATP6V1C1
TLR5
STK38L
ZNF71
TMEM106B
C9orf72
LYPLAL1
ZHX3
ACSL3
ZBTB37
LIMA1
DERA
ETNK1
NOL7
METAP1D
RBM26
ASL
NOTCH2
FOCAD
GALT
FANK1
USF1
TSTD1
PTAR1
PPFIA4
RABL2A
EXOSC8
ALG5
CHUK
BRAF
PRKAB1
RAB21
CD274
ING1
CARS2
RC3H1
PCNA
CDS2
TMEM17
TBC1D14
RABL2B
NOMO2
APOLD1
GEM
DNAJC3
CHMP4B
GTF2IRD2
KLF5
SPATC1L
ACTN4
DEDD
ARID3C
RAB33B
PON2
UHMK1
RRNAD1
ISG20L2
IQSEC3
AASS
CCDC146
ERI3
SRI
FAM149B1
ECD
WASHC4
SFR1
PNPO
PRDM1
COG6
TSC22D1
STOML2
FAM214B
ECM1
NDUFA4
MOCOS
SLC25A32
DCAF13
SUCO
RGP1
MSMP
GBA2
UBE2H
NCAPD2
MRPL51
C6orf89
STRIP1
CPT2
CLIC5
PRKCQ
GOLGA5
B4GALNT3
ZDHHC16
SUPT4H1
SSB
SEC61G
RNF139
IL6R
EXOSC1
LIMK2
EPM2A
SESN1
PHF2
RCL1
PLEKHB2
CERS5
CHMP5
BAG1
PUM1
AP1S1
THAP9
SEC31A
OGDH
PIP4K2C
KCNJ2
ZMAT3
CCZ1B
PC
WASHC5
NSMCE2
HAUS1
ATP5F1A
JAK2
ASXL2
SVBP
PYURF
PIGY
HERC3
ERMAP
EML4
COG2
RRP7A
GSK3A
CCDC30
TRPC4AP
CTHRC1
ZNF699
VPS26A
CCNYL1
C2orf69
RDH13
PGAP1
MICU2
SARAF
RGS2
SPRING1
RNFT2
KMT2E
MCTP2
GPATCH8
SPDYE6
RABIF
PIK3R1
LOC100289561
CHMP4C
ZBTB11
RPL24
PHF11
GCNT1
ESRRG
SMG9
SAR1A
SPDYE7P
RASA4
POM121
IARS2
BPNT1
ZFP69B
SERINC3
PKIG
USPL1
TM7SF3
PLBD2
PAK4
MED21
HMGB1
HIBADH
GRB2
SEC22B
NUDT15
TWF1
SWAP70
OGFOD2
ABCB9
DEPDC1
STX6
SECISBP2
FRAT1
CKS2
ACO1
WDHD1
SOCS4
SLC20A1
RTF2
ITPRIP
DCT
CDC73
SZT2
MED8
CHD2
FSIP1
ANGEL1
RABGEF1
UNC13B
ZNF396
AVPI1
ABLIM1
IFT81
AQP3
IMMP2L
SRSF5
NEDD1
USP14
STEAP2
SMIM12
PLAA
IFT74
MAPRE2
IER3
FLOT1
CHAMP1
RAB11FIP2
DUS4L-BCAP29
DUS4L
DOCK7
COG5
ASPH
GORASP2
CCDC183
MMD
ZSCAN4
TKFC
DDB1
INPP5K
CDC37L1
TDRD3
ST6GALNAC3
OPN3
KIAA0895
FBL
CHML
ANLN
TBC1D7-LOC100130357
TBC1D7
SIGMAR1
GTF2B
ZNF782
IFT88
DMWD
DMPK
ACADS
TEX10
NFIB
EFHC1
EEPD1
DCTN3
ZNF624
ZNF384
SMC5
LRRC58
RAB5IF
LSM8
NDUFAF6
SLC46A3
CSPP1
COPS5
COMMD8
PTPN4
LENG8
FRA10AC1
DYNC2I1
RIPK1
MTRF1L
ERLIN1
EBPL
CD55
CCDC107
CA9
ARHGEF39
TBC1D13
STK32C
SLC25A15
NUB1
LRRC27
DPP9
C1orf198
ERBB2
VEZT
MLF2
MCCC2
GPC5
FGD6
OSBPL9
MFSD5
POLR2M
CCDC91
CBLL1
RASA4B
HNRNPLL
DHX35
SPDYE16
OLA1
MINK1
KBTBD8
CARD11
RFESD
NAA25
ITM2B
CEP55
C10orf95
SP100
NUS1
COPS8
PHF3
MARCHF2
LRRC37A3
GSG1
CRYZL2P-SEC16B
TIGAR
PSPH
KRIT1
CCT6A
ANKIB1
WWP1
TPP2
FAM221A
DTWD2
DISC1
ARHGAP19
NOMO1
NBPF15
LSM6
FBXO48
FBXL13
ARMC10
APLF
TMED9
B4GALT7
STARD3NL
ELOA2
DTX2
ATXN7L1
TMEM104
SPAAR
NAT9
HRCT1
GFPT1
CYP2J2
TMEM260
SAXO1
RRAGA
ATP7B
ALG11
PEX5
RB1
NEK5
MICOS10-NBL1
MICOS10
CHD1L
AP3S1
SLMAP
SAMHD1
RPIA
CS
PANK2
EPN1
DHRS12
BAG2
ADCK1
YWHAB
XPR1
SPINT2
RAC1
PPP1R14A
VPS37B
TTC39B
SNX8
RSBN1L
NOMO3
MTHFD2L
C15orf61
ABCC6
SIL1
RIPK2
PSMG4
HEXIM2
CLK1
ABCF1
NPIPB15
NDE1
MARF1
SP2
HDAC1
GPCPD1
FDFT1
FAM135A
EFCAB13
DNM1L
ZFAND2A
RNF24
MARS2
LMTK2
KATNAL1
ANKLE2
ZNF558
URGCP
UBE2D4
TUBAL3
SMIM10L1
PRH1-TAS2R14
PRH1
PDXDC1
MFSD13A
DNAJC27
UGGT2
SMNDC1
RNF114
PCTP
CCN3
UBXN2B
ERMARD
BICD1
OXGR1
GTF2IRD2B
CRACR2A
CCZ1
TRIM4
EIF2D
CBWD5
CBWD3
EPHX2
TMEM150A
TDRD5
RNF181
PUM2
FAM91A1
MYBL1
ATP5F1E
UAP1
STAT1
NSFL1C
CCDC68
STXBP3
PDK4
MALSU1
LHPP
KDELR2
LSM2
HSPA1L
HSPA1A
WFDC3
KAAG1
GPAM
DNTTIP1
DCDC2
SCGB1C2
SCGB1C1
RMI2
RIC8B
PROSER1
ODF3
NHLRC3
COQ2
BPHL
ZNF181
TECPR2
STYXL1
MDH2
ETS1
CINP
CCDC126
ARHGEF35
AFTPH
USP39
PDIA6
NAPA
LHX9
C2orf68
C1orf53
BAIAP2L1
ATP6V0A2
POLD1
PLEK2
MAP3K9
KDM3A
GGACT
AGL
ACBD6
SYNRG
PRPF38B
NOD1
FKBP1A
MAGI3
AKAP11
TNKS2
PIP4P1
PCMT1
OSGEP
GTF3A
CTBS
APEX1
ABRACL
TRAM2
TPMT
TMED7-TICAM2
TMED7
NANS
KDM1B
TTC12
TRMT5
TNFAIP8
SLC38A6
ZNF195
RNF19A
RAB4B
MIA
MED30
HACD2
FAM185A
CEP57L1
ARPC5
TPT1
TPK1
SCO1
ADPRM
ZNF607
PHETA1
NIFK
CREG1
TAF1B
SCCPDH
SARS1
IPP
SLC35C2
SEMA3C
RCBTB2
DESI2
ZNF488
PPARD
CD164
ARFGAP2
PLCXD2
P4HA1
MST1L
KIF16B
FYN
TMEM128
LMCD1
SLC25A13
MOB3B
IFNK
HDAC6
FBF1
EXT1
ZNF416
ZIK1
TRIM32
TFAP2A
MTAP
MIOS
CNOT4
ASTN2
AP5S1
TOR1B
QSOX1
PGAP3
ZNF441
XRN1
ETV3
DNAJB2
XRCC2
TMEM183A
RHBDD1
VDAC2
TK1
SYBU
RXYLT1
RPP38
PGBD2
EPN2
ANK3
AFMID
ADAR
ACBD7
ZNF197
SPRYD7
SPAG8
HINT2
TLE2
RWDD1
NSMCE3
LPCAT3
POLR2K
DISP1
VDAC3
KRT8
KRT18
DTD1
CACYBP
BICRA
ZYG11B
TMEM199
SNX3
SEBOX
RNASEH2B
POLDIP2
GHR
CAV1
SOCS5
PLEKHF2
NDUFV2
FAM3C
WRN
SLC35B3
SDE2
PURG
PRKAB2
MET
ZNFX1
SLC25A16
RABEP2
PPIL4
MACROD2
BNIP2
USP30
SRSF11
SLF2
NCAPH
ITPRIPL1
GEMIN8
DACT3
WDR25
WARS1
PTCD1
LEMD2
CPSF4
ZNF77
UCHL3
TNNC2
TMEM79
SNX21
SMG5
RPS19
NFASC
MSI2
MPP7
MLEC
GGT7
COMMD6
ANKRD31
ACSS2
YWHAG
CLPTM1
BMT2
APOC2
ZNF326
USP32
TMEM182
SLC30A7
RNF103
EXTL2
AHR
TBC1D5
STX7
SHMT1
PLD3
GLRX2
FBXW2
C19orf47
ASNS
HEATR5A
GRAMD2B
AGK
TMEM71
TF
STAU1
SS18
PRPSAP2
PHF20L1
PDE6D
MYLIP
KIZ
GAPDH
DCK
COPS7B
ATP6V0A1
DDX42
CD82
CCDC47
TUSC1
SPATA13
PPP2R5D
PEX6
MYO1G
MED9
GPS2
B4GALT3
ARSG
TMEM255B
RRP36
RNF34
POLR1E
MEA1
DIP2B
COQ10A
C7orf25
ANKRD52
UBR5
TMEM132B
PARM1
CYREN
CMTR1
SPDYE5
RNF115
POM121C
POLR3C
PHF20
LYST
FAM98C
DUSP15
ACOX3
POLR2D
ELAPOR1
CCDC130
C1orf194
AHCY
SIPA1L2
PSMG1
HENMT1
FZR1
DOHH
CZIB
PELO
MIPOL1
LRRC36
ITGA1
IRF2BP2
AUH
ZBTB6
THOC3
RGS9
RC3H2
PLPP5
HECA
GATAD2A
TC2N
MRTFA
DLG4
BAZ2A
AFF1
ACADVL
PIGH
IRF6
DLD
TUBA1C
SLC37A1
RNF220
PEX7
MIER1
FAM162A
DNAI4
CPQ
CCDC58
ASCC1
ANAPC16
AHI1
SNX5
SMDT1
SLC4A8
PRDM4
NDRG1
MGME1
GALNT6
TECPR1
NYNRIN
NANP
MANSC1
LAP3
FAR2
CSNK1A1
BORCS5
TSSK4
TMEM9
NRL
DSCC1
ARID5B
ANKAR
ZNF302
SMPDL3A
SLC9A8
SH3BGR
RNASE4
RHEBL1
RELB
MAP3K14
MAP2
LCA5L
KMT2D
GAL3ST4
FABP7
ANG
TSN
TASOR2
RPP25L
RGPD6
PI4KB
PAXBP1
IFIH1
GIGYF2
GCA
CXCL3
ADAM17
TMEM8B
TESK1
TES
PSTK
PPIL1
GOPC
FAM221B
ERO1B
EIF2AK1
DMTF1
STK40
STK3
SIT1
RTKN2
ZNF706
ZNF428
XBP1
USP45
TTC4
TSTD3
SYPL1
SRRM5
SHBG
MCM10
MBD6
MARCHF10
FXR2
DDIT3
BCL3
TFB2M
POLE3
MPZL1
LYRM9
ELAC2
CNST
C9orf43
ALAD
TRAFD1
TBK1
SNX27
ARF4
XPO4
URGCP-MRPS24
TCOF1
QDPR
PRKG1
PHF14
MLH3
KCTD16
H2AZ2
CLRN2
ATP6V1B2
UBE2D3
H4C12
H4C11
GOLGA1
ENTPD6
ARHGAP22
PDS5B
CPE
UBE2O
TMEM109
PRPF19
NT5C3A
NOL8
KLF7
CENPP
CDK19
AMD1
AANAT
PPP2R5A
PET117
PEA15
KAT14
HNRNPM
YIPF3
POLR1C
NCALD
MRPL35
LRRC73
IMMT
FSD1L
CLN5
TRMT44
TM2D2
PRELID3B
LRRD1
CAST
ATP1A1
ADAM9
ZNF862
TTC13
RNASEH2C
PYGB
KAT5
HIP1
GOLGA7B
ENGASE
DEPTOR
C16orf70
ARV1
TUBGCP3
TPRA1
TIGD1
SLC35B1
NNT
INPP5B
GIPC1
FAAH
ERCC3
EIF4E2
DIAPH1
CD9
CBLB
ARHGEF7
TOM1L2
RMDN1
MRPL15
DRC3
CSRNP2
CPNE3
COPG2
COMMD7
CARNMT1
AHCYL1
TTC23
SIRT5
PPFIA3
PIKFYVE
MYO18A
LRRC28
CDK18
C19orf73
C12orf45
KLHL12
C16orf89