ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HMGB1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◣ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

MAMDC2
DUX4
KMT2A
LOC102724770
DGCR6
FRG2C
ARL4D
USP31
NUDT4B
NUDT4
GTF2IRD2
EPHX1
SYT7
GTF2IRD2B
MTRNR2L2
MSH3
DHFR
MCU
NAA25
NSFL1C
KATNBL1
FRG2
DEDD
COQ2
STK17A
LRP12
MSRA
ZNF341
MXI1
JRK
ANKRD40
KIF5C
KDM3B
RNF220
ATL1
ZNF860
OSBPL10
MTRNR2L1
SLC39A10
RHOB
ZSWIM6
NREP
BCAR3
TMEM245
CCDC88A
CNIH1
NOTCH2NLC
JMJD1C
PDCD2
TMEM71
PHF20L1
KANSL1L
HDHD5
PRICKLE1
CCN2
RAB11FIP2
JPT1
BCAP29
TOP2B
NCOA5
SLC9A1
ACVR2A
TMX4
NSF
EIF4H
CCDC200
PREP
INO80D
CERS6
VPS36
CKAP2
LDLRAD3
DNAJC25-GNG10
DNAJC25
CCSER2
OPN3
CHML
TES
NOTCH2NLB
NOTCH2NLA
MET
BTG1
TSPAN10
NPLOC4
HOXA4
HOXA3
ARHGAP28
IKZF2
MUC3A
C7orf25
ATL2
ZNF280D
LMO4
MARK2
MUC1
BZW1
RNF146
ZNF839
DISP3
MOV10
SPTLC2
DOCK7
FAF1
CDKN2C
TWF1
ST3GAL3
CRPPA
SCAP
NBPF1
GPSM1
DNLZ
CARD9
ZHX3
ST7
IBA57
EID2B
EID2
RPS19
THSD7A
C1QBP
GNAI2
DTWD2
SIRT1
YWHAQ
CHRNA5
PEX7
DUSP5
EPM2A
CALM2
GALNT10
PAM16
HOXB8
HOXB7
HOXB6
ARHGAP29
UPF1
ARHGAP26
C7orf26
FOXN3
PTBP1
HHIP
LIN9
CEP68
GRIK4
AHCYL2
RAP2B
ZNF718
FBXL13
ARMC10
PLCB1
ANKRD36B
LDB1
TM2D3
MRFAP1L1
BLOC1S4
QSOX2
SPDYE14
SPDYE10P
CASTOR2
AGFG1
HEBP2
PELI1
LIMS1
H2AZ2
SYPL1
NFIB
MAP4K5
MAP2K2
RHBDF1
MPG
UBE2S
TASOR2
SPTAN1
TGFBR2
TCF4
BASP1
EPN1
MARVELD1
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
FBXO30
SCOC
ATXN2
ZNF148
PUF60
PIGX
ETS1
CEP19
POLG
SIK3
PTX3
ZNF609
UBE2E2
GIGYF2
NADK2
VAMP3
MYO1B
MYO5A
MAML1
RNF135
NUDT3
WDR26
FBXL7
PRKCA
KMT5B
HMGB1
ASXL1
ZMYM4
SOCS5
PINK1
ITGB1
PURA
HSP90AB1
SLTM
AHCYL1
ZNF595
SRSF9
ENDOD1
DYNLL1
MFSD14B
TRAK2
STRADB
SBNO2
G3BP1
SPAAR
HRCT1
YBX3
ACVR2B
HMGN1
ELAC1
TTLL11
EPHB1
NFE2L2
PPP3CB
VPS26A
TBC1D8
OAT
ELL2
RGL1
PSD3
EXT1
SLC20A1
NUTM2E
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CLTB
NOTCH2
ESYT2
DYNC2I1
RAC1
MTHFD2L
AP3B2
TMED7-TICAM2
TMED7
SMIM13
ZNF706
ZFAND3
LIG3
GNB4
CMTM7
C15orf61
SPR
RIC1
RALGAPB
INPP5F
ARID5A
HDGF
COBLL1
ARNTL
XXYLT1
CHAMP1
TSPAN5
TMEM131
TRPC1
DENND1B
TTC21A
SNRK
GORASP1
GCLM
ZNF76
TUBB4B
STPG3
FAM166A
PAOX
ECHS1
TNPO1
SEC24B
MCMBP
ZNF362
SLC35B2
SETD7
NFKBIE
SMAD4
TLN1
CREB3
UBN2
ITGAV
PCBD2
HECTD2
TSPAN3
TPK1
PARVA
RNF103-CHMP3
RMND5A
TM7SF3
MED21
TMEM255B
JAK1
ERAP1
UGCG
GATAD1
CREM
LCORL
CHST3
R3HDM2
KCTD18
INHBC
EIF4G1
UBAC1
MCC
ARHGEF7
ZFAND5
USP3
ARHGEF37
PANK1
DONSON
AKAP12
ZBTB20
NOXA1
GCLC
TAF5
PDIK1L
PTGES2
MSRB2
HLCS
OXR1
TAF4
TATDN2
DESI2
STK39
ZFAND4
VRK1
PRDM11
TOMM6
SGMS2
PRICKLE4
LRRC37A3
FRS3
CPSF6
CDR2L
KLF9
POGLUT3
KRT10
AKAP7
TSKU
SLC25A37
STX7
KPNA1
ACTB
ECI1
PTEN
PRR7
KLLN
IRAK3
ECE1
ADAR
ZDHHC14
SHOC2
BBIP1
SLC25A24
ARHGAP42
AFAP1
SUN2
SNX25
RC3H1
PIK3CA
FOXN2
DENND4B
CFAP97
CAPN1
ZFPM2
VPS4A
TPRN
TMEM203
OSBPL1A
NXF1
NDOR1
METTL9
LGR4
RRAS2
ACTR10
RBM26
TFAP4
SSU72
AP3D1
FAM222A
UBE2J2
SCNN1D
GET4
ID3
B3GALT1
SMARCD2
KIF27
TRAPPC3
RHOBTB1
MAP7D1
ZFAND6
TM9SF3
SNTB2
CHST11
AFAP1L1
PLEKHA8
FKBP14
TECPR2
CINP
TMEM43
SENP6
INPP1
CHCHD4
CCDC71L
GNG12
VCL
COQ10A
ANKRD52
WDR1
RUNX1T1
PUS7
PHRF1
FMNL2
ZC3H14
PTPN21
MAPK11
TRIM65
MRPL38
HHEX
COA8
BAG5
SORBS1
SLC30A1
MORC2
AP3M2
ZNF124
TCF12
TMEM64
RALB
PRKAG2
LRP8
GCSH
UST
PRKAR2B
DTD1
TNFAIP3
STK35
BACH1
RINT1
BMP4
CRTAP
ADORA2B
TRIM44
LIFR
USP36
SNX2
ENTPD4
DPP9
RAD54L2
RAP1GDS1
MAP3K3
GID8
DIDO1
SCRT1
ING1
DGAT1
CARS2
PRPF40B
DEK
D2HGDH
ZSWIM7
TTC19
SMAD5
LCOR
IL17RC
TBC1D9
RAPH1
PHF20
FAM174C
CIRBP
FXN
TACC1
HESX1
APPL1
GATA2
BSN
SRSF4
PTPRA
PEAK1
PACS2
HMG20A
EHD4
BRF1
TOR1B
STX11
PHAX
ALDH7A1
ARHGAP10
MSANTD2
IRF2BP2
CD164
PROS1
MBTPS1
ETS2
ARL5A
ARL13B
MAP1B
LPIN1
SASH1
IER5
CXCL2
CPOX
CCDC138
NUCKS1
CELF6
ELF2
DNAJC21
ZNF668
ZNF646
NEK7
SH3D19
ELK3
DDHD2
HBEGF
HACD2
FBXO33
CARNMT1
B3GNT2
GAB2
ETV6
CTSO
MAP2K1
FAM193B
ATE1
RNF139
BLMH
YPEL2
TANC2
ARID1A
RAB4A
NOCT
NAV1
FOXJ3
DDAH1
PAXBP1
OGFOD3
NR3C1
HEXD
FAM83G
CMTM3
ARFGEF2
ZMIZ1
UBE2H
GRAMD1C
CAPZA2
PAIP1
NPHP3
EIF3L
CDC42
CCDC117
ANKRD54
ZFP64
MFSD14A
JUP
SBF2
PANK3
NDUFAF6
MAP4K3
MAP1LC3B
FBXO31
ANXA4
ADD1
TERF2
PRDM5
KCTD3
HIPK1
LHX9
C1orf53
STK24
RSAD1
MTMR12
IMMP2L
CHAD
RBM17
EIF2AK4
SMAD3
ZNF697
PTPN4
LRRC8D
HSF2
TPM1
ITGBL1
ZNF513
SNX17
ROCK2
LAMTOR3
CSRNP2
TRMT1
SYNE2
NACC1
CACNA2D1
UBE2M
RAD23B
MARCHF6
CHMP5
CHMP2A
BAG1
UNC5B
SIPA1L2
NR2C2
LACTB
KAT6A
ZSWIM8
TCF7L2
NAPEPLD
MBD3
CHCHD1
SMIM19
SLC20A2
LRIG3
ITGA6
FHL2
BMPR1B
UBXN2A
UBE2D3
CIZ1
CISD2
KCTD5
KBTBD2
HSP90AA1
FAM241A
ZBTB45
ASAP1
PLPP4
INTS6
ZC3H12C
SESN1
SPCS3
PRSS27
IGFBP4
CAP2
TRPS1
NAA38
MAP2
CHD3
GXYLT1
GNAI1
SLC12A2
BOD1L1
ADRM1
ZC3H7A
TOMM40
EXOC6
TNIP2
ORAI1
ADNP2
UVSSA
SNAI1
TMEM150A
TDRD7
SLC36A4
RNF181
NRG1
MIA3
HNRNPR
GRK5
ZFYVE9
TBC1D30
PHIP
FDX1
SSNA1
RBFOX2
GPR146
ANAPC2
SRGAP1
CTNNB1
SNX5
REV1
MGME1
FRYL
FAN1
WTAP
SOD2
SMURF1
POLR3H
MYCBP2
SACS
MAP3K1
LHPP
HYI
GLRX5
GGA2
TP53INP1
NCOA6
LEKR1
SGK3
PI4K2A
MORN4
TMEM211
RMI2
FGD5
DNMBP
TMTC1
FCHO2
COPRS
EML1
ZNF511
TUBGCP2
RANBP17
DNAJB6
WNT2B
NXN
PHC2
ILKAP
EPB41
NCOA7
CEP170B
CDCA4
CDC42BPA
DCBLD1
C9orf72
IQSEC1
GRK2
SH3BP5
RAB40C
RAB32
PTBP2
GSR
CSK
SFXN1
RAB7A
POLR3GL
LIX1L
CAMSAP2
ANKRD34A
NEDD4
AGK
UTP4
OSBPL5
NUFIP2
DERPC
DEGS1
CHTF8
YBEY
PABPC1
NIPSNAP2
NFIA
MCM3AP
GPCPD1
FBXL22
CRYBG3
CCND2
H2AZ1
DNAJB14
DICER1
C11orf91
RXYLT1
RELA
PLEKHA1
CAST
ZBTB34
FAM171A2
DMRTA1
UTS2B
HRH1
CCDC50
TOLLIP
RAP1B
FKBP9
EPS8
BPNT2
TMEM151B
FNTA
CLCC1
YRDC
PHF3
C1orf122
B3GNT5
ATXN7
ZNF445
USP49
FAM228B
CSNK1E
CDCA7
VPS54
EIF2AK3
RESF1
LOC100287896
LIPT2
IFFO2
HSPG2
CSF1
SEPTIN9
NAE1
PRDM2
ODC1
NRIP1
HPCAL1
FLNC
SOCS1
PLOD2
LIMS2
DUSP7
CDC16
ANKRD36C
PAQR3
MED13L
UHRF2
RUFY1
PRSS23
DLST
RALY
ZYG11B
TWF2
TAC4
SDCCAG8
PPM1M
MAP4K4
CEP170
PKIA
DYNLL2
CNOT6L
OTUD4
GLS
RNF216
NFKBIA
HGS
ELK4
B3GLCT
ARL16
SEMA4D
LRRFIP1
USP10
LYL1
HEG1
WAC
PPM1A
DENND5A
BOD1
RAB35
NIT2
MAPK8
SPIN1
NT5C2
DUSP10
CACHD1
ABR
YPEL1
PCDH9
LYPLA1
ING2
APPL2
TLK1
SFTPC
LGI3
SCN8A
LRRK1
H3-3A
FIGN
LYRM7
KLHL5
HINT1
TPP2
TDRD3
PEX10
OSBP
CUL3
BRAF
AFF1
ZHX1-C8orf76
ZHX1
SMARCC1
MTMR9
JADE2
PKD1
NAP1L4
UBE2E3
SCRT2
OAF
ZNF131
VEZF1
TEX38
PRNP
ATPAF1
SPPL3
SMIM4
PREX1
NT5DC2
ITSN1
CRYZL1
ACER3
UBE2D2
TXNDC16
SSX2IP
RAB21
ENPP1
AAK1
ZBTB25
ZBTB1
METTL23
JMJD6
CCNJ
B3GALNT2
USP14
TP53BP2
PRKAR1A
MDFIC
TRIM33
RNF103
PRKCQ
PFN2
GNPTAB
XKR6
EDIL3
C17orf58
TMEM51
NDFIP1
SPRING1
SPATA9
RNFT2
RHOBTB3
BAZ1B
ATXN7L1
TIGD5
NR4A2
EEF1D
CYP2U1
CD81
TUBB2A
TPBGL
SURF4
STAT5B
SFT2D3
RAD52
NTAN1
NIN
MBD2
ANKRD12
IDH2
HNRNPAB
ERRFI1
RBKS
INAFM2
BABAM2
NOTCH1
SEMA3F
CTCF
TUSC1
TSEN54
SVIL
RAP2A
LLGL2
CKAP5
CASKIN2
SVBP
FAM47E
ERMAP
DMWD
DMPK
ERBIN
AMMECR1L
SYT14
RGMB
ZSWIM4
SNCAIP
PTTG1IP
PLPP3
PHACTR2
SUMO2
RNF169
MAP3K14
TMEM181
RARG
NAMPT
MFSD14C
DAPK2
TJP1
FAM107B
BRPF3
TARS3
SRXN1
RAI14
MTRNR2L8
FAM126A
COL23A1
TMA7