ChIP-Atlas: Target genes

Potential target genes for RXRA

Query protein: RXRA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100386 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RXRA's Target genes

◢ RXRA: Average

◢ SRX10104974: 5637

◢ SRX10104975: 5637

◣ SRX100386: GM12878

◢ SRX100497: Hep G2

◢ SRX10475073: Hep G2

◢ SRX10475074: Hep G2

◢ SRX100551: hESC H1

◢ SRX3450326: JMSU1

◢ SRX3450327: JMSU1

◢ SRX3450328: JMSU1

◢ SRX3450329: JMSU1

◢ SRX3450330: JMSU1

◢ SRX3450331: JMSU1

◢ SRX014754: Leukemia, Myeloid

◢ SRX014774: Leukemia, Myeloid

◢ SRX5457233: Liver

◢ SRX5457234: Liver

◢ SRX5457467: Liver

◢ SRX5457468: Liver

◢ SRX359952: LoVo

◢ SRX096345: LS-180

◢ SRX096346: LS-180

◢ SRX194580: MCF-7

◢ SRX6866209: MKPL-1

◢ SRX4671294: NAMEC8

◢ SRX4671295: NAMEC8

◢ SRX4671296: NAMEC8

◢ SRX014751: NB-4

◢ SRX014769: NB-4

◢ SRX190223: SK-N-SH

◢ SRX4671309: SUM 159PT

◢ SRX4671310: SUM 159PT

◢ SRX4671311: SUM 159PT

◢ SRX103223: THP-1

◢ SRX682381: TSU-1621MT

◢ SRX014783: UPR9

◢ SRX014784: UPR9

◢ RXRA: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
RGPD1
RGPD2
MTRNR2L9
WDR74
STX5
DYNLL1
LEKR1
EMILIN2
EAPP
MTRNR2L10
H4C14
H3C15
H3C14
H4C12
H4C11
H2BC15
H2AC15
H4C15
NGB
SCRIB
MAMDC2
MTRNR2L6
MTRNR2L1
DUX4
ZC3H10
RPL41
ESYT1
H2BC4
H2AC6
WASHC2A
WASHC2C
LOC112694756
LAMP1
H2BC14
H2AC14
H4C3
H1-6
C1orf198
TAF12
PARP16
SCML1
PAFAH2
POLDIP3
SIRT4
POLR2J3
PCNA
CDS2
TMEM230
SKIDA1
TMEM107
MUC3A
FRA10AC1
STAT1
HSPE1-MOB4
HSPE1
HSPD1
TRMT2A
RANBP1
KIF2C
GBA
MTF2
CASQ1
H3C4
H4C4
H2BC6
IPO4
TM9SF1
TEX9
RFX7
DNAJB4
B4GALNT3
SLC20A1
ATR
H4C8
SCGB1C2
SCGB1C1
ODF3
AMDHD2
ATP6V0C
IRF9
TRIM48
INTS12
GSTCD
GABARAP
PHF23
DVL2
NCBP3
GSPT1
CALM1
PSMB8
TAP2
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
NUF2
DAB1
H4C9
MDN1
OMA1
YIPF2
TIMM29
H2BC11
H2AC11
H2BC12
H2AC12
CASP8AP2
TSR3
GNPTG
KRTAP21-2
KDM3B
LOC102724770
DGCR6
UBTF
TMEM216
LRRC37A3
H2AC19
H2AC18
CDKN2AIPNL
SLC9A1
MTERF1
RAE1
MTRNR2L3
ARMC7
VPS33A
POR
MDM2
ACSL3
PIM1
VPS13D
AFF3
DRAP1
C11orf68
DPY19L4
NOTCH2NLC
PTEN
KLLN
NOTCH2
RHOT2
RHBDL1
PMF1-BGLAP
PMF1
RBIS
PRR5L
COMMD9
ZCCHC4
ZSCAN30
GORASP2
NPAS4
GTF3C3
C2orf66
LRFN3
BNIP1
DENR
HS1BP3
TOR1AIP2
TOR1AIP1
RPS7
VOPP1
TDRD7
NOLC1
CCNC
RAP1GAP
ZMPSTE24
RRM1
NCF4
GNAI2
NME1
BBC3
ASB2
ADNP
IQCN
JUND
HEXA
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
PRND
CLCN7
IKBKG
NUP54
SF3A3
LOC100996842
CD68
EIF4A1
MPDU1
MAPK11
RNF223
SLC35B1
MRPS23
AURKAIP1
NOXO1
TBL3
RPS2
RNF151
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
MAP1LC3B2
EXD1
CHP1
BCL3
STX16
SLC2A4RG
LIME1
COMMD2
PLEKHM3
TSN
POLR3B
DDX1
MARCHF8
ACTR10
ZNF507
LRRC59
CTNNB1
TVP23B
COMMD4
TCTN3
SLC39A13
AKAP11
ABCA3
SLC38A7
CSPP1
COPS5
NDUFS7
MED23
MRPL44
SSBP1
STAM2
TTYH2
RPL38
FOXJ3
DHX33
PDE11A
RBM45
PTPN6
C12orf57
ALG10B
MRPS18C
HELQ
HPS6
ARMH3
BAIAP2
SLC25A51
ATP5MC2
CDK5RAP1
BHLHE23
UBXN6
RABL2B
PTMA
DENND4A
HASPIN
OR2L13
OR2AJ1
STX18
CACTIN
ERVH48-1
POLR2J
RBM28
PSMD3
SHMT2
NDUFA4L2
ZNF25
N4BP3
SMARCD2
STAT3
H4-16
H2AJ
LSM11
GRAMD1C
POLD3
ATP6V0D1
AGRP
UBALD2
NAGPA
RBBP5
BHLHA15
RABL2A
PRRG2
NOSIP
TLR5
DGKZ
BCL2
RHOF
SETD1B
TRIM69
XKR7
AP1M2
CDC42BPG
FAM227B
DTWD1
INTS1
TMEM147
CSNK1D
STK17A
ID1
RDH5
ITGA7
BLOC1S1
DSTYK
GTF2H2
CAB39
GRM4
SNX16
SHISA5
NSUN4
TREX1
WASHC5
NSMCE2
RPL10A
SMIM41
SCAND1
POLG
EIF3F
NCAPH2
LMF2
MRPL24
HDGF
ATG101
SLC12A6
NUTM1
NOP10
TRAPPC3
MAP7D1
DCK
TAF3
ABHD17A
NOXA1
IQCG
RPL35A
MAPK8IP3
UGT8
PHRF1
TATDN3
NSL1
PDE6D
COPS7B
PHB2
NUP205
NOTCH2NLB
NOTCH2NLA
DCP1B
RPL21
ZBTB45
SLC27A5
CYP1B1
DIAPH1
TTC8
TMEM242
ACTRT3
MYNN
R3HCC1
GLIPR1L2
CDC37
CERS2
PLCD3
ACBD4
ANXA9
SRRM3
GALK2
COPS2
TMEM115
NPRL2
CYB561D2
TSSK4
MLEC
COL4A2-AS2
RBM39
ZSWIM1
SPATA25
NEURL2
CTSA
H3-3B
ZNF341
UNK
SMPD4
MZT2B
ZFP36
SH3GL1
MRPL23
COX16
CHAF1A
PAF1
MED29
TRAPPC8
BPTF
FFAR3
FFAR1
TMED9
B4GALT7
SNX18
IER3
FLOT1
RAB25
RAF1
RMDN2
RBM17
UBQLN4
LAMTOR2
MED27
DCAF10
TBC1D19
RWDD1
PIH1D1
ALDH16A1
SLC17A7
PPP6R1
GABPA
ATP5PF
ZNF358
MCOLN1
ADGRG1
INTS5
GANAB
FRG1
RPS20
TIPIN
IPO13
VPS50
HEPACAM2
LPCAT3
MRPS31
STOML1
RPS15
TOR2A
PML
APC2
JRK
USP3
PNKD
HGFAC
ZWILCH
SNAPC5
RPL4
H2BC17
H2AC17
NPR1
ILF2
AAMP
GPBAR1
H3C12
COL9A2
TMEM127
CIAO1
DCP1A
INO80C
RABGGTA
TGM1
HMGN2
PLEK
CCDC200
PXK
MRPL1
FBXO28
TSNAX
PSMF1
TRIP6
SRRT
CENPS-CORT
CENPS
SLC2A11
ADAT2
ARHGEF12
PEX3
ARSG
AMZ1
TUBA4B
TUBA4A
STK16
GLB1L
PSMC3IP
PCID2
CUL4A
EIF2D
RAD54L
SLC35E2B
VTA1
NMBR
AP5B1
TSFM
RAD23A
CALR
WDFY1
OVOL1
TAS2R40
FASTKD1
CHAD
RSAD1
UNC45B
NLE1
SKP2
LMBRD2
RNASEH2C
KAT5
ACTL10
NECAB3
C20orf144
ARHGAP42
ATG16L1
TOX4
RAB2B
INKA2
DDX20
MEF2A
FBXO5
ART1
FBXW5
C8G
LARP1
CTSW
SLC39A3
LCN12
KRR1
PPIF
CCDC85B
TUBA1B
FIBP
MAPRE3
CRYAA2
CRYAA
NRTN
SELENOH
NFAT5
PSMG3
IL21R
RBSN
USP30
CRLF3
ATAD5
VPS29
RAD9B
APOBEC3B
PRKDC
MCM4
TCHP
HCN2
ZFYVE26
RAD51B
LZTFL1
NMUR1
AHCY
SLBP
TMEM129
TACC3
TPD52
TOMM22
SLC2A4
PRDM1
DPP9
SLC33A1
TOP3B
EIF1B
PRKCE
PRDX1
ZNF518A
BBS1
NUDT17
SPATC1L
SNAP47
JMJD4
ZFYVE1
LRRN3
NR1H3
ACP2
DHX8
TUBB
MDC1
DCLRE1B
AP4B1
SPNS1
ADAR
SEC13
GNB2
RNPS1
H3C6
H2BC8
H2AC8
RPGR
FAM228B
TP53I3
SF3B6
RPL27
IFI35
ANKRD46
ROM1
EML3
TAOK3
SUDS3
MOB4
SRSF7
B3GAT3
CLMN
SART1
PAXBP1
PRRT2
MAZ
NCBP2AS2
NCBP2
FAM111A
MAD1L1
FCMR
NUDT1
MRM2
DUSP4
CCR1
ZER1
E2F3
ZBTB40
PNPT1
TMA16
RTTN
GP9
SLMAP
TRAF4
SAAL1
CDK11B
CDK11A
ACTR3
ZNF3
COPS6
UTP3
NDUFS3
KBTBD4
FAM180B
SNRPB
NBN
C18orf25
KMT2C
TRIM32
ASTN2
RTP3
LTF
U2AF2
CCDC106
TRIM41
TMEM167B
LUC7L2
PDE4A
CDKN1A
SLC24A1
ERCC5
ZBTB4
SLC35G6
POLR2A
CIPC
ZDHHC4
TMEM91
NAA80
HYAL3
B9D2
IFRD2
CNOT6
DERL3
BROX
AIDA
TGFB1
KANSL3
FER1L5
MYEOV
PCBP2
LSP1
MTA2
KLHL20
CREM
TUT1
TNFRSF21
MRPL58
KLK1
TMSB4X
ENOSF1
RMND1
ARMT1
SMG6
CRK
NAPA
SGCA
C8orf76
SMIM29
GET4
ARL14EP
TRIP4
PCLAF
TSSC4
WBP1
INO80B
ZFAT
FLOT2
DHRS13
MCM3
PFDN6
RGL2
CCNL1
VPS45
POLR2J2
UBC
FAM207A
PPIP5K2
ATF3
U2SURP
SNX3
RETSAT
ELMOD3
THAP11
EDC4
COMMD1
MMACHC
TESK2
CCT4
ZNF639
GPR68
ZNF148
RUVBL1
POLR2C
EEFSEC
TIA1
PCYOX1
KLHL12
NUP153
USPL1
HMGB1
FTH1
KMT2E
NDUFS6
MRPL36
BEST1
SLC1A4
MOGS
MRPL53
TIPARP
ATAD1
MARCHF7
KIF21A
METTL7A
PAK1IP1
C6orf52
MED15
KAT6A
POLR3E
PTK6
SRMS
NDUFA6
FLT3LG
PRMT5
CARM1
UCKL1
ATF4
NPAT
ATM
UBE3D
DOP1A
FMNL3
TXNIP
SNRPE
SSNA1
ANAPC2
MFSD4B
GADD45B
TSHR
ARID2
TMEM41A
RAB8A
PHF13
PRR14
FBRS
NFKB2
TMPO
MPEG1
NT5C1A
SLC43A3
CCAR2
C8orf58
CCDC43
ATP7A
C19orf48
TOR1A
TNIP2
SLC35A3
CCND3
TAF8
FAM187A
NSFL1C
EFTUD2
CCDC103
H2BC5
H1-4
NAPG
TNFAIP3
SCAF11
GFI1B
TSC1
MAP3K9
MRPS16
DNAJC9
PES1
FAM104A
C17orf80
RARA
MAT2A
RCBTB2
PRMT3
SYS1
PBLD
HNRNPH3
C7orf26
TP53TG5
BCL9L
EEF1A1
AGK
VARS1
TMEM138
CYB561A3
BAK1
MAPK1IP1L
H1-2
PTPN3
LMNA
SH3BP2
MBLAC1
TAF6
CNPY4
TMEM101
HSPA6
RWDD3
ZNF784
TEKT2
ADPRS
FAM104B
FARSB
RAC3
DCXR
NXF1
KIF15
KIAA1143
IL2RB
GCHFR
TRIM65
MRPL38
THOC1
BUB1B
RMDN3
CSAD
ZNF740
ARHGAP22
ING1
CARS2
SNAI3
WDR11
LYRM4
FARS2
INTS7
DTL
NOL11
MAPKAPK2
RAD52
C1orf159
AP2M1
MRM3
GLOD4
ANGPTL4
WSB2
SREBF1
DHRS3
CPT1A
BHLHE40
SQSTM1
RGS3
ARID3B
VSIR
ZNF367
SPHK2
CYP26A1
RXRA
NUDT15
LEO1
SLC25A20
REXO4
ADAMTS13
LTBP3
DBP
ETFB
SLC45A4
SOCS2
FASN
DLG4
ACADVL
RALGDS
SERPINE1
BCAR1
MYLIP
SOAT2
IGFBP6
TMCO6
CD14
BCKDK
NRL
COL21A1
WDFY2
ABLIM3
ZMYND8
NDUFA2
IK
DOT1L
UQCRHL
FBXO46
SLC6A12
ABCC10
RARB
ZDHHC19
SLC51A
ARNT
TBP
PSMB1
SLC35F6
ATP1B1
C3
PDE12
TGM2
TAGLN2
TNPO3
CALML3
NEDD4L
AJUBA
ACACA
USP32
NBEAL2
CCDC12
ITGB5
PEMT
ABCA1
PRKAG2
MAP1LC3A
RARRES1
CSF3R
SYNPO
ZGPAT
ARFRP1
DCAF11
TRPM1
KLF9
LYST
LOC102724265
ECH1
APOC1
ZNF775
TNFRSF1B
IL1R1
CCDC174
FETUB
ITPK1
SEPTIN9
CDK3
ZFAND2A
PDE4DIP
SERINC2
TINAGL1
TUFT1
TRIM25
LOC100509620
MIDEAS
DONSON
ARFGEF2
LRRC8A
KYAT1
DENND4B
SLC51B
ITGB2
ELL
SH3BP4
TCP10L
GFOD2
ZMIZ2
AIFM2
PCK2
SERPINF2
COL5A3
DUSP1
RBFOX2
ADRB3
SH2B1
PHC2
ABCB11
ERCC1
KLF16
RANGAP1
LPP
NR1I3
NOL4L
PYGL
ADAM17