ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475380 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◣ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◢ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
MYADM
RHOH
TRIM3
SMARCD2
PMPCB
PLCB4
S100A16
DNAJC10
KRT8
KRT18
KIF26A
AFF4
NPAS4
RABGEF1
FAM110C
SPRYD3
GRK6
TPD52L2
N4BP3
REXO4
SMIM14
POLR3B
CYRIB
ZG16B
ARG2
TTC39A
GNPNAT1
BCAS2
METTL25
CCDC59
KMT5A
SCAMP1
SIRT4
IQSEC3
GSE1
BLOC1S5
CPLX2
TMEM199
POLDIP2
NSUN5
IQANK1
FAM83H
SLC45A4
PPM1H
HTR5A
MED26
C6orf89
SNAP23
MTFR1L
CRNKL1
CFAP61
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IPPK
TBX2
RPS6KB2
LEMD2
WDR74
PMVK
DHTKD1
ZC3H10
PPP4R3A
MXRA8
NOL11
MOB4
ECH1
CAP1
MKRN1
SLC39A1
CREB3L4
ALG8
BAIAP2
GGPS1
ARID4B
EIF2S1
ATP6V1D
PSMD6
TECPR1
TRMT12
PPP1R11
SLC35A1
SNRPB
TRIB1
KMT2C
REPS1
SEC16A
C9orf163
FLOT1
PCYT1A
IDH3A
USP32
UCHL5
RO60
MADD
HSH2D
USP9X
ZNF609
CKS2
H4C8
STX16
DDX59
FOSL1
NAB2
VMP1
PTRH2
HES1
ARPP19
METTL3
LUC7L2
UBE3C
CCDC174
SLIRP
ALKBH1
SGPP1
SPOP
SCNM1
LYSMD1
NCBP2AS2
NCBP2
DEF6
FAM221A
TMEM87B
CCPG1
C15orf65
TPK1
ALDH3B2
HNRNPA2B1
ANO7
SYNGR2
PABPC1L2B
RASAL1
FKBP4
SLC25A36
MTMR12
ATP5MC2
PAQR4
UBA1
BCAS3
KCTD11
CYB5R4
RTBDN
TXNDC11
PARD6B
TFF1
MRPL44
FAM227B
DTWD1
SAPCD2
REXO5
ERI2
TMEM251
MOAP1
RBBP8NL
ZNF408
ARHGAP1
ZKSCAN2
PFDN4
SPIN1
PDE4D
FAM20B
C9orf152
COMT
SNRPB2
CLTC
CTCF
PLEKHG2
ZNF446
BARHL1
ZNF217
CPOX
CD59
CAPN8
HSF1
BOP1
FANCF
ZMYND8
PTPN1
DHRS3
LLGL2
BCL3
KPNA1
GFPT1
RPSAP58
CHD8
ISG20
HEATR6
AKAP1
MLPH
WASHC5
NSMCE2
SIK1B
SIK1
NUCKS1
OSER1
CCNL1
TRIM37
MRPS11
MRPL46
CLEC16A
FAM83A
TUBG1
RETREG3
GOLGA1
TOB1
APPBP2
NECTIN1
RHOBTB2
CIAO3
TSPAN13
VPS26C
LHPP
PGK1
NRAS
RPL35A
IQCG
TACO1
EEF2K
SNAP29
PI4KA
TMEM30B
SUMO3
RCHY1
PSMB7
SMS
SNRPA
C19orf54
SKA2
PRR11
AMBRA1
TFIP11
MICA
PRR7
RBM19
DPM2
LDAH
CLK3
NCOA3
TUFT1
RBSN
MARCHF7
USE1
SUSD2
PCCA
UGT2B15
CCDC149
HIPK1
VPS37C
RAB7A
ADCY4
PPM1A
USP31
DDX42
CCDC47
KIF21A
TOP3A
SMCR8
LIN54
TBC1D15
ARL14EP
STK4
PPIH
BPNT2
CEP63
ANAPC13
TMEM183A
ZFP62
PROSER1
NHLRC3
NOXA1
MRPS23
RGS9
KIF5C
PHF14
CCDC9
TEX22
VMAC
NDUFA11
EHMT1
DDX23
NPDC1
ZNF860
OSBPL10
GNAQ
ARFGEF2
HELB
BRIP1
EEF2KMT
PNKD
LYRM1
CHRM4
STMN3
METTL2A
FLYWCH2
TEP1
CYP4V2
ALG10B
GREB1
SNRPD2
QPCTL
GTF2H2C_2
GTF2H2C
AHCYL1
CSRP1
RAB3D
PDE8A
SMIM6
PPM1D
DHX8
IPO11
VPS11
SMG8
PLEKHF2
AP4E1
CHD4
FAM207A
ZNF2
SGO1
ATP5MPL
TEX14
RAD51C
RAB1B
SLX4IP
UST
ZHX1-C8orf76
ZHX1
CALM1
OSBPL7
PNPLA7
CD82
PRR15
GRHL2
RTF2
ZDHHC12
RGL2
INKA2
DDX20
DDX50
USP38
HMG20B
ABCF3
CEP128
TARS2
ACOT7
BCAS4
THTPA
EPN3
LRCH4
FBXO24
LRRC37A3
CNBP
GTF2H2
UTP25
MFSD5
YWHAZ
ZNF277
DOCK4
DYNC1LI1
SUDS3
TFF3
HOMEZ
RPS26
PKP2
NME1
CSNK1A1
MAF1
TMBIM6
RBBP5
RAET1L
ZBTB38
ZNF44
ANKRD13D
SLC25A40
DBF4
SNAP25
DSTN
BFSP1
GRHL1
TPH2
KRIT1
ANKIB1
RNF24
TOR1AIP1
RMDN2
BTG1
HLTF
POLR2J3
ANKS6
VPS33A
SMNDC1
NEUROD4
PCTP
CCDC200
TSNARE1
C8orf76
TLNRD1
EIF3D
HK1
DNLZ
ANKRD17
DHX40
RBM45
TMEM150A
EXD2
ATXN2
NMRAL1
HMOX2
PRORP
PPP2R3C
TBC1D30
EEF1AKNMT
SSBP2
SLC26A1
EIF1AD
BANF1
EXOSC4
UMAD1
EFHC1
LAD1
MKRN2
KCNB1
NTAN1
PLEKHN1
PDE12
YIF1A
SULT1A4
SULT1A3
NFKBIZ
SRP72
GCN1
MCM7
AP4M1
SPTBN4
BLVRB
CSTF1
AURKA
NDUFB6
ZNF564
ZBTB42
RAPGEF6
TNFAIP1
IFT20
CAPZB
EMB
EBAG9
MACROH2A1
SERP1
EIF2A
POU5F1
AHRR
PRKAB2
CHD1L
FBXW2
PARP2
RCAN1
ABCB8
IFRD1
ALG10
SLC44A2
USP4
ALG13
ACACA
COX16
SEPTIN9
RNF224
PAH
SEMA3B
MIER1
KLHL12
UPK3BL2
RPS7
SEC24A
VPS13B
PPP2R5E
TBPL1
PPM1E
RNFT1
RUSC1
CKMT1A
MARCHF11
RPS20
USP36
TCAF1
HERPUD1
GPR107
PPP1R12B
LFNG
CDK5RAP2
BCAS1
TDRD7
DIABLO
TMTC3
CEP290
S100P
BCL2L2-PABPN1
BCL2L2
RNF223
CIB3
GSTA4
RALGDS
ZFAT
UPK3BL1
CYREN
DPY19L4
IPO4
TNPO2
ADPGK
GNAI3
SYVN1
PDXK
TUBD1
RPS6KB1
SPHK2
RPL18
NTMT1
NUTM2E
TBCC
BICRAL
JUND
ESCO1
PLXNB2
DNPEP
GABPB2
ROGDI
WDR11
DDX46
PSMC5
FTSJ3
INTS2
SYT7
OCEL1
ALCAM
LRRC46
SPRED2
STYXL1
MDH2
HIP1
CASZ1
PATZ1
PDE4DIP
MRPL33
PPP5D1
CALM3
SRFBP1
NQO1
GAPVD1
STAT6
STX3
HM13
NR4A1
TPRKB
B4GALT7
TSC22D1
XKR7
RPS27
GATAD2B
PROM2
SRI
GLRA1
RPL12
LRSAM1
FAM222A
DCLRE1B
AP4B1
ENTPD5
BBOF1
PPIP5K2
TPD52L1
TMEM9
UBE2E2
P2RX4
MRPS33
MON2
FAM83E
FBXL19
ZBTB8OS
RBBP4
RRP12
DSTYK
SNAPC5
ST20-MTHFS
LRRC6
KRR1
EPS8L1
ZNF367
TAB3
VEPH1
CACFD1
MTOR
PSMA5
TMED7-TICAM2
TMED7
DDHD2
PRKCI
SOCS2
DFFB
CEP104
TRIM33
U2SURP
RHOT2
RPS11
IST1
LOC100289561
XPOT
SLC29A2
MLXIP
FMN1
PSMF1
TET3
TRIB3
DNAJC22
TMEM222
KANSL3
EFCAB10
CCDC22
UNC45A
ATR
TBK1
FRA10AC1
GALE
PWWP2B
MED23
HNRNPC
ZNF76
IVNS1ABP
ERICH6
PKM
CD2BP2
GCLC
FOXJ3
CRACR2B
MRPL24
UBE2Z
NPM1
PRKCZ
SPATA24
PRKCH
MARCHF4
LRRC45
CENPX
SLC25A24
ZNF335
SLC33A1
MRPS30
C3orf14
PDS5A
TOM1L1
BMS1
ACY1
SERPINI1
PDCD10
PTPN21
RRBP1
TPBG
TMEM14A
CACNB3
USP7
NFE2L2
TXNDC15
PCLO
OSBPL2
RPP14
HTD2
C16orf71
ANKS3
LOC389199
AFAP1
ESYT3
NADK2
PLTP
RUVBL1
HIBCH
CHFR
TTC6
FOXA1
EFR3A
DIP2A
RNF39
GTF3A
PABPC1
NOC4L
DDX51
TCERG1
TIPARP
FUT1
SYNJ2
TOGARAM1
KLHL28
MTMR4
CAMSAP3
LNPEP
EIF4B
DCP2
PACS2
BRF1
THUMPD3
FBXW5
C8G
CPNE4
SMIM26
CNTRL
C5
CCDC14
MAEA
GSPT1
MFSD4B
CTTN
RPL37
MARS1
ARHGAP9
ABCA5
ADIRF
USPL1
HMGB1
PPIL2
YEATS4
HPCA
PPFIA4
HOXA4
BICD2
ANAPC15
SLC39A9
ERH
MICOS10-NBL1
MICOS10
PERCC1
CTNNB1
CDC42SE1
SGPL1
PCDH1
ARL8B
FAAP24
CEP89
H2BC13
H2AC13
RBL2
NAAA
SWSAP1
PTP4A3
FANCL
TRIM56
COQ7
TGIF1
HTRA2
TCTN3
PA2G4
MAP2K3
HSPE1-MOB4
HSPE1
HSPD1
TCTN1
BTBD1
CRADD
FGGY
CPSF1
ZNF572
UTP23
GOLGB1
L1CAM
AHCY
RPL32
TBL1X
SKIV2L
NELFE
NOP16
NDUFB10
HIGD2A
UEVLD
SETX
FUT4
SVOP
ZBED8
SMIM20
KAT7
SCAMP5
TRIP4
CKMT1B
CD55
FAF1
SELENBP1
PRDM2
CAP2
CLIP1
SPATA2
CREM
CYBC1
SLC1A5
RNF130
HLF
TOP3B
LRP10
MAPK10
GJA10
METTL9
GDAP1
MRPL52
MAP1LC3B2
MRPL1
FOXN2
UNC93B1
SNTG1
NCOA2
ID1
NR2F2
LBX2
WDR1
MAZ
ARNT
MYCL
PRKCSH
CCDC151
RBM25
MRPL3
ZNF592
NSD1
NDST1
ZNF484
SREK1
PRSS22
UBXN4
BORCS5
VPS29
RAD9B
RAD51
ZC3H6
NOL10
TMEM184A
SLC8A2
EXOC2
CSRNP2
SETD5
SENP1
PFKM
SUPT4H1
MEIS1
TMEM101
PCF11
CRISP3
SASS6
ABL1
ARRDC2
SERBP1
CAPRIN2
BOD1
GORAB
TPD52
RASEF
CCAR2
EDEM1
SRSF5
RAB26
DISC1
ZKSCAN5
SLAIN2
SPIRE2
RAC3
SF3B6
FAM228B
GOLGA3
PDCL3
STIL
ARAP2
SSBP4
SAMD8
ABCC6
SLC24A1
NT5DC3
MCRIP2
AASS
SCRIB
YBEY
MCM3AP
GOLGA5
SLC25A42
PPP6R1
SF3B2
PCBP2
VOPP1
GLI4
ASB6
AP3B1
VPS37D
CYB561
MTA3
KCNG3
LSG1
IRF9
WWP1
YIPF2
TIMM29
CFAP410
MIA2
ZNF433
GJC3
SMARCA4
RRP15
EIF3E
XPO6
SSNA1
ANAPC2
CCNT1
TXNIP
CALB1
C7orf25
ARID4A
LACC1
CCDC122
ZFYVE1
SURF6
PRMT6
SLC39A3
SMIM5
TATDN1
NDUFB9
MDM4
ZBTB37
NR4A3
SLC25A32
DCAF13
NFX1
EXOSC6
FBXL17
MRPL40
HIRA
HERC4
EIF4A2
ZNF410
DDX41
TOR1A
RNF10
GATAD1
SCFD1
ALDOA
ALG6
PRKAG2
NBN
LSMEM1
DET1
NAF1
CRCP
TSEN54
CASKIN2
EIF4ENIF1
KMT5C
ZNF354A
KIF16B
C17orf58
TREX1
NUDCD3
NDUFA4
GARS1
MRPS31
NAPEPLD
MRPL21
IGHMBP2
TMEM44
SAMM50
NDUFS2
MACROD1
SLC39A13
GLRX3
MDM2
MTSS1
TADA3
ARPC4-TTLL3
ARPC4
SCRT1
LRRC24
MEF2A
SUMO2
CCDC124
ERG
GRAMD2B
ELP6
INTS5
WDR54
C2orf81
APBA2
DMTF1
CLCC1
TJP2
POLG
CCDC90B
STARD4
PCOTH
MIPEP
URB1
SMAD5
SH3BP4
AP1M1
UHRF1BP1L
KLHL20
ATXN2L
NEDD4
WNK4
CORO2A
COMMD2
CTBP2
SNRPE