ChIP-Atlas: Target genes

Potential target genes for SPDEF

Query protein: SPDEF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX323402 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SPDEF's Target genes

◢ SPDEF: Average

◢ SRX2164790: A549

◢ SRX2164792: A549

◢ SRX10475380: MCF-7

◢ SRX10475381: MCF-7

◢ SRX323401: MCF-7

◣ SRX323402: MCF-7

◢ SRX323403: MCF-7

◢ SPDEF: STRING

LRATD2
SMARCD2
TRIM3
MTRNR2L2
PLCB4
RTBDN
POLR3B
MTRNR2L8
ARL14EP
MYADM
METTL25
CCDC59
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPL44
C9orf152
PCCA
REXO4
EXOC2
PSMD6
S100A16
MOB4
AFF4
KRT8
KRT18
WDR74
GNPNAT1
STX16
TACO1
SPRYD3
NOL11
UCHL5
RO60
TARS2
ZNF609
BAZ2A
TTC39A
NOTCH2
SMG8
IQANK1
FAM83H
PAQR4
KMT2C
N4BP3
PLEKHG2
TOP3A
SMCR8
FAM221A
SCAMP1
ZNF217
SKA2
PRR11
CYRIB
FAM20B
USPL1
HMGB1
SNAP29
PI4KA
INKA2
DDX20
MADD
REPS1
ALG8
DNAJC10
GNAQ
DYNC1LI1
REXO5
ERI2
EMB
DSTYK
IPPK
EIF1AD
BANF1
LDAH
GGPS1
ARID4B
MED23
GRK6
EED
SEC16A
C9orf163
CEP63
ANAPC13
ZNF860
OSBPL10
MARCHF7
ZNF408
ARHGAP1
DPY19L4
TPD52
BCAS2
HIPK1
VPS13B
ZG16B
LEMD2
SNRPB2
FAM207A
SPOP
TRIM37
RPS7
ZNF518A
NDUFS3
KBTBD4
SMIM14
RUSC1
RBBP5
ZC3HC1
WDR24
USP32
PSMB7
LSG1
TBC1D30
INTS12
GSTCD
ECT2
ZMYND8
DCAF10
TMEM199
POLDIP2
FAM227B
DTWD1
SLC25A36
TOB2
TOR1AIP1
NEK5
GSE1
NQO1
USP38
MLPH
WDR11
NECTIN1
ATP5MC2
CNBP
BLOC1S5
AP1M1
PPM1H
TAFA3
PMPCB
PGK1
APPBP2
AP3B1
SCYL3
TFF3
RTEL1
MAF1
RBSN
MEF2A
CXXC5
TEX14
RAD51C
SPHK2
RPL18
NOXA1
IFRD1
DEDD
CHD8
COMMD2
KANSL3
TRIM33
GABPB1
DNAJC25-GNG10
DNAJC25
GSPT1
PRMT6
SWSAP1
CPOX
UNK
MICA
ARL8B
SLC39A6
ELP2
CYREN
PHF14
PCYT1A
SCNM1
LYSMD1
SLC34A3
ADPRHL1
UST
PLA2G15
MRPL1
KRR1
RASEF
KMT2A
SYNGR2
MRPS33
ZBED8
PDE8A
OTUD7B
CKMT1B
H2AC21
CLEC16A
TLNRD1
NRAS
TSPAN13
TMEM183A
SLC33A1
LNPEP
TCAF1
TOP3B
USP9X
LUC7L2
UTP25
ALG10
SETD9
ZNF446
ATAD2
PPM1D
ZFP62
PMVK
EEF2K
TMEM251
MOAP1
SNRPB
PSMA5
CCDC12
CLTC
VMP1
PTRH2
LRP6
ALG10B
TSEN54
CASKIN2
DDX59
BRIP1
PPP2R5E
INTS2
ZNF410
BRINP3
CIAO3
PPIP5K2
TBPL1
RPL37
PPP3R1
RPS29
ZNF197
MMADHC
BCAS3
TRIP4
KMT2D
FMO5
PDS5A
BZW1
PLCG1
LINS1
ASB7
KIF26A
HNRNPA2B1
NCOA3
ADH5
HEATR6
MON1B
ATR
SGPP1
LSM5
AVL9
YIF1A
SLC24A1
PDE4DIP
PSMC5
FTSJ3
B3GAT2
GNPDA2
NPM1
TPD52L2
ATXN2
NEDD4
RAB1B
RCAN1
ERCC6L2
TOMM22
CRNKL1
CFAP61
RPL12
LRSAM1
DDX23
KIF22
TANC2
RHOH
NPAS4
KMT5A
RABGEF1
FAM110C
SIRT4
RPS6KB2
C6orf89
NSUN5
SNAP23
ARG2
CPLX2
HTR5A
MTFR1L
TRIB3
IQSEC3
SLC45A4
EIF2S1
ATP6V1D
TMEM87B
ZDHHC1
MED26
MKRN1
CCPG1
C15orf65
ZC3H10
TRMT12
PPP4R3A
TBX2
ECH1
DHTKD1
MXRA8
METTL3
TECPR1
MTMR12
HSH2D
H4C8
PARD6B
RPS26
FOSL1
TXNDC11
CAP1
PPP1R11
DMTF1
CCDC174
SLC25A40
DBF4
SLC35A1
UBE3C
SLC39A1
CREB3L4
ZNF655
SPTBN4
BLVRB
IDH3A
FLOT1
FKBP4
PFDN4
FLYWCH2
TEP1
DEF6
SNRPA
C19orf54
DHX8
PRORP
PPP2R3C
KCTD11
TRIB1
SLIRP
ALKBH1
UBA1
RAPGEF6
ARID4A
CKS2
ZKSCAN2
NAB2
ARPP19
RPSAP58
TFF1
BAIAP2
GREB1
CYB5R4
CCNL1
NCBP2AS2
NCBP2
ANAPC15
BARHL1
RPL32
COMT
VPS26C
SUMO3
RBBP8NL
DHRS3
ANO7
TPK1
SAPCD2
HES1
DDX42
CCDC47
CCDC200
AKAP1
PTPN1
MRPS11
MRPL46
NUCKS1
SMS
LIN54
PNKD
PABPC1L2B
ING4
LHPP
CHD4
LLGL2
SLC25A24
PRR7
RPL35A
IQCG
CD59
KPNA1
UGT2B15
ZNF335
ALDH3B2
FANCF
TMEM30B
PDE4D
ARFGEF2
CYP4V2
PLEKHF2
MTOR
RBM19
DPM2
HMG20B
PPIH
CAPN8
POLR3F
EHMT1
DZANK1
GFPT1
RCHY1
GORAB
RHOBTB2
EXD2
CYBC1
WASHC5
NSMCE2
ISG20
PROSER1
NHLRC3
HLTF
HSF1
BOP1
AMBRA1
TBC1D15
FAM83A
SLC1A5
NME1
SPIN1
SUDS3
MRPS23
USE1
ZHX1-C8orf76
ZHX1
STK4
GTF2H2
TUBG1
RETREG3
RGS9
RASAL1
SLC16A5
VPS37C
BCAS4
SLX4IP
RAC3
CSTF1
AURKA
EXOSC4
TUBD1
RPS6KB1
NPDC1
ZBTB8OS
TUFT1
RBBP4
OSBPL7
CSRP1
KIF5C
GOLGA1
POLR2J3
ZNF576
METTL2A
IRGQ
RUVBL1
ESCO1
TEX22
SPRED2
EIF3D
OSER1
RNF223
PPM1A
CCDC9
ZNF2
LYRM1
SNRPD2
QPCTL
CCDC149
AP4E1
ANKS6
PNPLA7
EPN3
THTPA
CTCF
VPS11
BPNT2
RNFT1
HELB
MISP3
NEUROD4
ACY1
NDUFB6
TRIM59
DHX40
USP31
TFIP11
MIER1
CCDC97
TEN1
HARS2
HARS1
ACOX1
NFKBIZ
IPO11
UEVLD
TMTC3
CEP290
RAB7A
SUSD2
GTF2H2C_2
GTF2H2C
ANKRD13D
WDR55
RAB3D
SMIM6
GRHL2
COX16
JUND
UMAD1
TOB1
SLC51B
RMND1
DNLZ
ARMT1
CIB3
BCL2L13
VPS33A
DSTN
BFSP1
RMDN2
PPM1E
PLEKHN1
ZNF44
EEF1AKNMT
AHCYL1
PRKAB2
CHD1L
CALM1
CSNK1A1
YWHAZ
SEPTIN9
EIF4A2
EIF4B
EFHC1
KIF21A
TMBIM6
TNFAIP1
IFT20
GRHL1
ABCF3
MRPS30
PKP2
GRPEL2
BICD2
VMAC
NDUFA11
CLK3
UBE2K
SULT1A4
SULT1A3
NUDCD3
LAD1
GJC3
SSBP2
MRPL33
TSC22D1
PDE12
XKR7
GOLGB1
RTF2
RGL2
KLHL12
ACOT7
TPD52L1
GSTA4
LFNG
CEP128
ZNF277
SNAPC5
RPS27
DOCK4
PRKCZ
NME6
USP4
CDK5RAP2
BCAS1
MKRN2
NMRAL1
HMOX2
UNC45A
RNF130
ANKRD17
ZNF564
SGO1
ATP5MPL
MFSD4B
RALGDS
RAET1L
FBXW2
EBAG9
HERPUD1
TVP23B
TDRD7
EEF2KMT
CTTN
GTF3A
DDX50
C3orf14
RBM45
FAM222A
CKMT1A
SCRIB
IPO4
SGO2
P4HB
TAB3
GTSE1
SLC25A32
MACROH2A1
DCAF13
CHRM4
SRP72
KRIT1
ANKIB1
TSC2
NTHL1
DCLRE1B
C12orf57
AP4B1
RNF224
FMN1
DCP2
CIAO2A
EYA3
SMNDC1
ZDHHC12
SLC44A2
CAPZB
COMMD1
CCT4
TMBIM4
LRCH4
FBXO24
TSNARE1
PLXNB2
CD63
KCNB1
SEC13
PRR15
ST20-MTHFS
SNAP25
HOMEZ
HM13
ALG13
SYVN1
RPS11
PCTP
H2BC4
H2AC6
GATAD2B
BCL2L2-PABPN1
BCL2L2
PARP2
MON2
LRRC6
CD82
TPH2
RNF24
PPP5D1
CALM3
C8orf76
TIPRL
HIBCH
RRBP1
MAZ
DDX46
FOXJ3
CCDC22
UBR7
NTMT1
GON7
FAM83E
GAPVD1
RAC1
ARNT
SASS6
BCL3
SRFBP1
ALCAM
TNPO2
TMEM222
SEC24A
NTAN1
SYT7
SLC26A1
FAAP24
CEP89
LRRC46
SLC39A9
SIK1B
SIK1
ERH
TPRKB
SRI
GCN1
DNPEP
SERP1
PAH
EIF2A
IMPA1
GPR107
PSMF1
OCEL1
NDUFA4
PPIL2
VPS29
RAD9B
HLF
METTL9
MARCHF11
GABPB2
SLC25A42
MYCL
UBL7
TBCC
BICRAL
NR4A1
EFCAB10
SLC39A3
ESYT3
CPSF1
ZBTB42
YEATS4
IST1
PKM
ABL1
ZNF165
EIF2D
ZBTB38
TBL3
STAT6
POU5F1
MACROD1
STYXL1
SPECC1
SLBP
MDH2
GDAP1
AHRR
SLC35E2A
CASZ1
MCM7
AP4M1
CHFR
TTC6
TMED2
FOXA1
CSRNP2
CLCC1
VEPH1
TTC14
MICOS10-NBL1
MICOS10
GNAI3
RPL22L1
HIF1AN
SMIM5
HNRNPC
TOM1L1
SLC35B1
CD2BP2
CCAR2
ZFAT
UPK3BL2
SETD5
USP7
TMEM9
ADPGK
RPS20
PACS2
NFE2L2
BRF1
TXNDC15
BTG1
FBXL19
ABCB8
POLG2
ZNF512
THUMPD3
TCERG1
STX3
UPK3BL1
SPATA24
B4GALT7
TINF2
CACFD1
SMIM20
PCLO
ZNF76
PPP6R1
KAT7
ADCY4
MARS1
LRP10
FRAT1
DIAPH1
ARHGAP9
UBE2E2
PTP4A3
PPP1R12B
SCAMP5
DDX41
ID1
THEM4
HTRA2
LACC1
CCDC122
TJP2
PRKAB1
FBXW5
CRACR2B
C8G
OSBPL2
ABCA5
GLRA1
SENP1
PFKM
SCAND1
PABPC1
CPNE4
UBE2L3
TIPARP
SMARCA4
CDC42SE1
PDXK
TMED7-TICAM2
TMED7
IVNS1ABP
EPS8L1
BNIP1
AP2S1
USP36
SRRM3
ROGDI
G3BP2
TCTN3
TATDN1
NDUFB9
GTF3C3
SSBP1
EFR3A
SEMA3B
IRF9
U2SURP
SGPL1
FAM72D
FAM72C
STAM2
DIABLO
TOR1A
SLC39A13
METTL18
DDHD2
COX6B1
C1orf112
PA2G4
LOC100289561
HPCA
YBEY
XPOT
TMC7
NFX1
MCM3AP
CTBP2
ARRDC2
TBK1
SF3A3
POR
SERBP1
MDM4
DUSP10
CAP2
BMS1
NR2F2
BTBD1
ZHX3
SUMO2
CAPS2
PRKCI
NUDT5
CDC123
TLE3
STMN3
PPFIA4
NUTM2E
SF3B2
PRKCSH
CRADD
CCDC151
GARS1
DNAJC22
RRP15
LSM14A
HIP1
GCLC
DCP1A
TRMT2A
SUPT4H1
SETX
RANBP1
FANCL
CD55
AVPI1
SLC29A2
RPP14
KATNIP
HTD2
GTF3C1
PDAP1
BUD31
ZNF484
ZFP37
U2AF1L5
U2AF1
TBL1X
TBC1D16
TARS3
STOML1
SMIM26
SEC24C
RHOT2
CCDC40
TRIM56
MLXIP
CSDE1
PIAS4
C16orf71
ANKS3
MRPL24
ADIRF
RAD51
POC1A
FUT4
EIF4ENIF1
UFD1
RWDD1
CDC45
VIRMA
CLIP1
SLC41A1
NSG2
ANKRD46
SREK1
MAPK1IP1L
GLRX3
ZC3H6
RABEPK
COQ7
ALG6
NT5DC3
ARL13B
SPATA17
PPP6C
PCBP2
MAP2K3
JRK
GPATCH2
FOXN2
CNTRL
C5
NELFCD
DRAP1
C11orf68
TPBG
FRA10AC1
ALPK1
ZNF3
MRPS31
EIF2AK1
ZNF787
SLC16A6
SF3B6
RUBCN
RRP12
RNF10
PRSS22
KMT5C
GBA
FAM228B
DIP2A
ARSG
VOPP1
MAPK10
HSPE1-MOB4
HSPE1